Gene: C02p02540
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C02p02540
- Transcript Identifier C02p02540
- Gene Type Coding gene
- Location C02 : 1517189-1527133 : negative
Gene Family Information
- ID HOM05D001260
- #Genes/#Species 496/100
- Phylogenetic origin
- ID ORTHO05D002424
- #Genes/#Species 289/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C02p02540.1_BnaDAR
- v5 BnaC02g02140D
- single_cell_id C02p02540.1-BnaDAR
- ensembl GSBRNA2T00078636001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008612 | IEA | InterPro | peptidyl-lysine modification to peptidyl-hypusine | |
| GO:0009396 | IEA | InterPro | folic acid-containing compound biosynthetic process | |
| GO:0009058 | IEA | InterPro | biosynthetic process | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G05980 |
| GO:1904961 | ISO | PLAZA Integrative Orthology | quiescent center organization | AT5G05980 |
| GO:0010449 | ISO | PLAZA Integrative Orthology | root meristem growth | AT5G05980 |
| GO:0009809 | ISO | PLAZA Integrative Orthology | lignin biosynthetic process | AT5G05980 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT5G05980 |
| GO:0046901 | ISO | PLAZA Integrative Orthology | tetrahydrofolylpolyglutamate biosynthetic process | AT5G05980 |
| GO:0006730 | ISO | PLAZA Integrative Orthology | one-carbon metabolic process | AT5G05980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004326 | IEA | InterPro | tetrahydrofolylpolyglutamate synthase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016874 | IEA | InterPro | ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G05980 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G05980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036982 | Deoxyhypusine synthase superfamily |
| IPR001645 | Folylpolyglutamate synthetase |
| IPR013221 | Mur ligase, central |
| IPR023600 | Folylpolyglutamate synthase, eukaryota |
| IPR029035 | DHS-like NAD/FAD-binding domain superfamily |
| IPR036565 | Mur-like, catalytic domain superfamily |
| IPR036615 | Mur ligase, C-terminal domain superfamily |
| IPR002773 | Deoxyhypusine synthase |
| Mapman id | Description |
|---|---|
| 7.5.6 | Coenzyme metabolism.tetrahydrofolate metabolism.folyl-polyglutamate synthetase |