Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR025460 Cardamine hirsuta HOM05D001835 ORTHO05D001899 7.4e-46 186.8 92 100.0
BraA08t34659Z Brassica rapa HOM05D001835 ORTHO05D001899 5.5e-17 90.9 97 54.6
C03p72720 Brassica napus HOM05D001835 ORTHO05D001899 7.2e-17 90.5 97 53.6
AT1G26110 Arabidopsis thaliana HOM05D001835 ORTHO05D001899 9.5e-17 90.1 98 55.1
BolC3t19570H Brassica oleracea HOM05D001835 ORTHO05D001899 9.5e-17 90.1 97 53.6
BcaB03g12085 Brassica carinata HOM05D001835 ORTHO05D001899 1.4e-15 86.3 96 53.1
BcaC05g26648 Brassica carinata HOM05D001835 ORTHO05D001899 2.2e-13 79.0 86 57.0
Aa31LG4G5710 Aethionema arabicum HOM05D001835 ORTHO05D001899 1.4e-12 76.3 89 51.7
Cpa.g.sc1.234 Carica papaya HOM05D001835 ORTHO05D001899 5.4e-12 74.3 100 46.0
Gohir.A12G172300 Gossypium hirsutum HOM05D001835 ORTHO05D001899 5.4e-12 74.3 95 48.4
Gohir.D12G174700 Gossypium hirsutum HOM05D001835 ORTHO05D001899 5.4e-12 74.3 95 48.4
Gorai.008G187400 Gossypium raimondii HOM05D001835 ORTHO05D001899 5.4e-12 74.3 95 48.4
CSS0007567 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 1.0e-10 70.1 95 46.3
Thecc.02G362900 Theobroma cacao HOM05D001835 ORTHO05D001899 1.0e-10 70.1 95 45.3
THA.LOC104821968 Tarenaya hassleriana HOM05D001835 ORTHO05D001899 1.7e-10 69.3 91 48.4
Manes.14G096300 Manihot esculenta HOM05D001835 ORTHO05D001899 5.0e-10 67.8 88 46.6
CSS0032628 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 1.9e-09 65.9 95 44.2
CSS0035030 Camellia sinensis var. sinensis HOM05D001835 ORTHO05D001899 2.5e-09 65.5 95 44.2
TWI75G0523 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 3.3e-09 65.1 94 43.6
Prupe.1G303800 Prunus persica HOM05D001835 ORTHO05D001899 4.3e-09 64.7 96 44.8
vmacro10569 Vaccinium macrocarpon HOM05D001835 ORTHO05D001899 7.3e-09 63.9 95 43.2
Potri.010G131400 Populus trichocarpa HOM05D001835 ORTHO05D001899 9.5e-09 63.5 94 43.6
Cfa018648 Carpinus fangiana HOM05D001835 ORTHO05D001899 1.2e-08 63.2 99 41.4
Haze_17420 Corylus avellana HOM05D001835 ORTHO05D001899 1.6e-08 62.8 99 41.4
Sed0014405 Sechium edule HOM05D001835 ORTHO05D001899 1.6e-08 62.8 90 47.8
Potri.008G114900 Populus trichocarpa HOM05D001835 ORTHO05D001899 2.1e-08 62.4 93 40.9
Gohir.A03G097200 Gossypium hirsutum HOM05D001835 ORTHO05D001899 2.8e-08 62.0 95 42.1
A07p12690 Brassica napus HOM05D001835 ORTHO05D001899 6.1e-08 60.8 81 49.4
BraA07t29046Z Brassica rapa HOM05D001835 ORTHO05D001899 6.1e-08 60.8 81 49.4
Glyma.02G101700 Glycine max HOM05D001835 ORTHO05D001899 6.1e-08 60.8 89 43.8
TWI31G1161 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 1.4e-07 59.7 94 41.5
TWI79G0885 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 1.4e-07 59.7 93 41.9
Lalb_Chr17g0341831 Lupinus albus HOM05D001835 ORTHO05D001899 1.8e-07 59.3 98 41.8
Lalb_Chr21g0313381 Lupinus albus HOM05D001835 ORTHO05D001899 2.3e-07 58.9 85 43.5
MD16G1049700 Malus domestica HOM05D001835 ORTHO05D001899 2.3e-07 58.9 94 44.7
Ah.03g137990 Amaranthus hybridus HOM05D001835 ORTHO05D001899 3.0e-07 58.5 94 43.6
A08p27140 Brassica napus HOM05D001835 ORTHO05D001899 4.0e-07 58.2 75 46.7
Gorai.005G137500 Gossypium raimondii HOM05D001835 ORTHO05D001899 5.2e-07 57.8 95 41.1
Eucgr.G02360 Eucalyptus grandis HOM05D001835 ORTHO05D001899 6.8e-07 57.4 95 40.0
Phvul.003G025700 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 6.8e-07 57.4 88 44.3
Lalb_Chr04g0254961 Lupinus albus HOM05D001835 ORTHO05D001899 1.2e-06 56.6 99 40.4
Dinv05806 Davidia involucrata HOM05D001835 ORTHO05D001899 1.5e-06 56.2 96 42.7
Sabra10G0100300 Salix brachista HOM05D001835 ORTHO05D001899 1.5e-06 56.2 94 40.4
FvH4_4g28240 Fragaria vesca HOM05D001835 ORTHO05D001899 2.0e-06 55.8 94 39.4
FAN12G3996 Fragaria x ananassa HOM05D001835 ORTHO05D001899 2.0e-06 55.8 94 39.4
AUR62007742 Chenopodium quinoa HOM05D001835 ORTHO05D001899 2.6e-06 55.5 95 42.1
Ca_05095_v3 Cicer arietinum L. HOM05D001835 ORTHO05D001899 2.6e-06 55.5 89 41.6
QL01p000964 Quercus lobata HOM05D001835 ORTHO05D001899 2.6e-06 55.5 94 42.6
Phvul.003G025600 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 3.4e-06 55.1 99 42.4
MD13G1048400 Malus domestica HOM05D001835 ORTHO05D001899 4.4e-06 54.7 94 42.6
Actinidia13684 Actinidia chinensis HOM05D001835 ORTHO05D001899 5.7e-06 54.3 98 39.8
Glyma.01G089900 Glycine max HOM05D001835 ORTHO05D001899 5.7e-06 54.3 83 42.2
Glyma.04G134900 Glycine max HOM05D001835 ORTHO05D001899 5.7e-06 54.3 89 40.4
CiPaw.15G002300 Carya illinoinensis HOM05D001835 ORTHO05D001899 7.5e-06 53.9 101 38.6
DCAR_023693 Daucus carota HOM05D001835 ORTHO05D001899 7.5e-06 53.9 84 41.7
Dinv16522 Davidia involucrata HOM05D001835 ORTHO05D001899 7.5e-06 53.9 97 40.2


User provided reference genes

Program Settings