Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 0.0e+00 1371.3 684 100.0
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 0.0e+00 1076.6 684 77.3
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 5.1e-309 1063.9 692 76.2
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 7.6e-305 1050.0 685 75.9
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 5.5e-303 1043.9 688 75.1
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.0e-301 1038.1 688 74.9
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 8.7e-301 1036.6 697 75.2
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.8e-299 1030.8 688 74.4
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 6.3e-299 1030.4 690 75.4
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 8.2e-299 1030.0 688 77.0
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.3e-298 1027.3 688 74.7
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 5.9e-297 1023.8 696 73.6
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.7e-296 1022.3 688 74.6
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.1e-295 1019.6 686 74.1
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.5e-295 1017.3 685 73.9
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.2e-294 1016.1 688 74.6
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 1.4e-293 1012.7 650 76.8
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 7.4e-292 1006.9 685 74.7
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.7e-291 1005.7 684 73.0
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 3.7e-291 1004.6 685 74.0
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.1e-290 1001.5 685 74.0
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.2e-289 999.6 688 73.5
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.0e-288 996.5 681 71.5
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 3.8e-288 994.6 701 73.3
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 5.0e-288 994.2 694 73.1
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 3.2e-287 991.5 692 73.0
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.5e-287 990.7 690 72.8
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 7.9e-286 986.9 684 72.8
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.0e-285 986.5 691 71.8
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 6.7e-285 983.8 634 76.5
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 1.1e-284 983.0 692 72.7
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 2.6e-284 981.9 693 71.7
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 4.4e-284 981.1 690 72.5
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 9.7e-284 979.9 691 72.4
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 2.8e-283 978.4 692 71.7
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 3.7e-283 978.0 686 71.9
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 6.3e-283 977.2 691 72.4
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 8.2e-283 976.9 627 75.4
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 3.1e-282 974.9 672 73.2
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 2.6e-281 971.8 688 72.5
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.3e-280 969.5 680 71.0
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 3.8e-280 968.0 684 69.9
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.1e-279 966.5 682 71.3
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 1.6e-278 962.6 693 70.9
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 3.0e-277 958.4 686 72.4
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 8.8e-277 956.8 689 70.5
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.5e-276 956.1 665 71.7
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 3.3e-276 954.9 664 72.0
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 2.8e-275 951.8 690 69.1
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 5.3e-274 947.6 668 69.9
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 1.2e-273 946.4 694 69.6
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 2.6e-273 945.3 691 69.2
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 7.7e-273 943.7 687 70.5
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.0e-272 943.3 687 70.5
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 5.0e-272 941.0 689 69.8
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 5.0e-272 941.0 695 69.1
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 8.5e-272 940.3 687 69.9
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 3.6e-270 934.9 703 69.0
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 6.8e-269 930.6 684 69.2
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 1.5e-268 929.5 694 67.3
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 2.6e-268 928.7 687 69.3
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 3.4e-268 928.3 687 68.6
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 4.4e-268 927.9 684 68.9
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 7.5e-268 927.2 685 68.8
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 1.3e-267 926.4 682 68.8
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.8e-267 925.2 631 71.2
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 3.7e-267 924.9 685 68.6
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 4.8e-267 924.5 685 69.6
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 4.8e-267 924.5 683 68.8
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 6.3e-267 924.1 684 68.7
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 2.0e-265 919.1 683 68.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.0e-265 919.1 715 67.3
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 7.7e-265 917.1 686 69.2
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.3e-264 916.4 680 68.4
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.7e-264 916.0 680 68.7
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.2e-260 903.3 652 70.1
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 2.5e-255 885.6 680 65.3
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 7.2e-255 884.0 624 69.9
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 8.9e-253 877.1 678 66.4
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 7.5e-252 874.0 680 63.8
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 3.7e-251 871.7 807 58.5
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 6.6e-248 860.9 699 66.0
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 9.5e-247 857.1 557 77.0
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.6e-246 856.3 562 77.2
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 2.8e-246 855.5 616 67.2
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 1.2e-241 840.1 559 76.2
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 6.0e-241 837.8 688 63.4
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 5.2e-237 824.7 632 65.7
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 8.3e-235 817.4 559 71.7
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.1e-231 807.0 810 54.7
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.5e-231 805.8 614 64.5
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.7e-224 783.1 691 61.4
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 5.6e-215 751.5 581 65.7
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.4e-210 736.9 473 78.4
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 2.7e-209 732.6 622 59.5
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 2.9e-195 686.0 786 49.5
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 1.1e-162 577.8 432 66.4
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.5e-151 540.8 377 71.6
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.0e-147 528.1 419 62.3
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 9.2e-133 478.4 528 50.2
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.3e-115 421.4 558 45.5
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 8.9e-112 408.7 286 72.7
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 3.4e-111 406.8 351 62.1
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-101 374.8 338 58.6
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-101 374.8 338 58.6
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 3.6e-97 360.1 255 67.8
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 6.0e-84 316.2 554 37.4
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.3e-80 303.1 283 56.2
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 8.4e-78 295.8 252 63.1
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 5.3e-64 250.0 564 31.6
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 6.3e-57 226.5 251 48.6
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 4.2e-53 213.8 206 54.9
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.6e-52 210.7 145 74.5
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.1e-44 184.9 180 53.3
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 3.1e-32 144.4 142 56.3
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 1.1e-29 136.0 124 55.6
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 5.6e-13 80.5 77 67.5
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 7.5e-10 70.1 80 42.5
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 2.0e-07 62.0 91 35.2


User provided reference genes

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