Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0925 Cannabis sativa HOM05D004410 ORTHO05D006134 4.2e-56 221.1 110 100.0
CANSAT78G0098 Cannabis sativa HOM05D004410 ORTHO05D006134 8.9e-54 213.4 108 98.1
CANSAT78G1079 Cannabis sativa HOM05D004410 ORTHO05D006134 1.5e-53 212.6 108 98.1
CANSAT78G0037 Cannabis sativa HOM05D004410 ORTHO05D006134 1.3e-52 209.5 108 96.3
CANSAT78G1648 Cannabis sativa HOM05D004410 ORTHO05D006134 1.3e-52 209.5 108 96.3
CANSAT56G1932 Cannabis sativa HOM05D004410 ORTHO05D006134 1.0e-49 199.9 108 90.7
CANSAT21G0708 Cannabis sativa HOM05D004410 ORTHO05D006134 1.7e-49 199.1 108 89.8
Thecc.09G180400 Theobroma cacao HOM05D004410 ORTHO05D006134 4.7e-47 191.0 108 86.1
Nn8g40987 Nelumbo nucifera HOM05D004410 ORTHO05D006134 6.1e-47 190.7 108 85.2
TAR626G0361 Trochodendron aralioides HOM05D004410 ORTHO05D006134 6.1e-47 190.7 108 86.1
Cpa.g.sc95.31 Carica papaya HOM05D004410 ORTHO05D006134 8.0e-47 190.3 108 85.2
Dinv26445 Davidia involucrata HOM05D004410 ORTHO05D006134 8.0e-47 190.3 108 85.2
Duzib170G0185 Durio zibethinus HOM05D004410 ORTHO05D006134 8.0e-47 190.3 108 85.2
TWI75G1515 Tripterygium wilfordii HOM05D004410 ORTHO05D006134 1.4e-46 189.5 107 86.9
CiPaw.08G034000 Carya illinoinensis HOM05D004410 ORTHO05D006134 1.8e-46 189.1 108 86.1
Gohir.D08G028700 Gossypium hirsutum HOM05D004410 ORTHO05D006134 2.3e-46 188.7 108 85.2
Gorai.004G025800 Gossypium raimondii HOM05D004410 ORTHO05D006134 2.3e-46 188.7 108 85.2
GSVIVG01010906001 Vitis vinifera HOM05D004410 ORTHO05D006134 3.0e-46 188.3 108 84.3
C03p15070 Brassica napus HOM05D004410 ORTHO05D006134 4.0e-46 188.0 108 84.3
BolC3t13949H Brassica oleracea HOM05D004410 ORTHO05D006134 4.0e-46 188.0 108 84.3
ECA236G3126 Erigeron canadensis HOM05D004410 ORTHO05D006134 4.0e-46 188.0 108 85.2
MSTRG.4318 Avicennia marina HOM05D004410 ORTHO05D006134 5.2e-46 187.6 108 83.3
CARHR271080 Cardamine hirsuta HOM05D004410 ORTHO05D006134 5.2e-46 187.6 108 83.3
HanXRQChr06g0179561 Helianthus annuus HOM05D004410 ORTHO05D006134 5.2e-46 187.6 108 83.3
COL.COLO4_23558 Corchorus olitorius HOM05D004410 ORTHO05D006134 6.8e-46 187.2 107 86.0
Potri.001G338700 Populus trichocarpa HOM05D004410 ORTHO05D006134 6.8e-46 187.2 107 85.0
QL11p004818 Quercus lobata HOM05D004410 ORTHO05D006134 6.8e-46 187.2 108 84.3
Ciclev10009088m.g Citrus clementina HOM05D004410 ORTHO05D006134 8.9e-46 186.8 108 84.3
Lj3g0017980 Lotus japonicus HOM05D004410 ORTHO05D006134 8.9e-46 186.8 108 84.3
Cfa005486 Carpinus fangiana HOM05D004410 ORTHO05D006134 1.2e-45 186.4 108 84.3
Haze_21974 Corylus avellana HOM05D004410 ORTHO05D006134 1.2e-45 186.4 108 84.3
unitig_26.g9274 Utricularia gibba HOM05D004410 ORTHO05D006134 1.2e-45 186.4 107 86.0
Actinidia40404 Actinidia chinensis HOM05D004410 ORTHO05D006134 1.5e-45 186.0 106 84.9
SGA_v2.0_scaffold172G39079 Striga asiatica HOM05D004410 ORTHO05D006134 1.5e-45 186.0 108 83.3
Sp6g19010 Schrenkiella parvula HOM05D004410 ORTHO05D006134 2.0e-45 185.7 108 82.4
arahy.Tifrunner.gnm1.ann1.2H7I9L Arachis hypogaea HOM05D004410 ORTHO05D006134 2.6e-45 185.3 108 83.3
arahy.Tifrunner.gnm1.ann1.FB81IM Arachis hypogaea HOM05D004410 ORTHO05D006134 2.6e-45 185.3 108 83.3
CsaV3_5G008380 Cucumis sativus L. HOM05D004410 ORTHO05D006134 2.6e-45 185.3 108 82.4
Thhalv10014295m.g Eutrema salsugineum HOM05D004410 ORTHO05D006134 2.6e-45 185.3 108 83.3
Lalb_Chr07g0180591 Lupinus albus HOM05D004410 ORTHO05D006134 2.6e-45 185.3 108 83.3
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 3.4e-45 184.9 108 83.3
MELO3C008596.2 Cucumis melo HOM05D004410 ORTHO05D006134 3.4e-45 184.9 108 82.4
Gohir.A08G018100 Gossypium hirsutum HOM05D004410 ORTHO05D006134 3.4e-45 184.9 108 83.3
Lsat_1_v5_gn_8_69561 Lactuca sativa HOM05D004410 ORTHO05D005614 3.4e-45 184.9 108 83.3
Lj3g0011551 Lotus japonicus HOM05D004410 ORTHO05D006134 3.4e-45 184.9 108 84.3
PSO210G0218 Papaver somniferum HOM05D004410 ORTHO05D006134 3.4e-45 184.9 106 84.9
VMungo1215G0063 Vigna mungo HOM05D004410 ORTHO05D006134 3.4e-45 184.9 108 84.3
A03p12910 Brassica napus HOM05D004410 ORTHO05D006134 4.4e-45 184.5 108 82.4
A10p17910 Brassica napus HOM05D004410 ORTHO05D006134 4.4e-45 184.5 108 82.4
Eucgr.L02823 Eucalyptus grandis HOM05D004410 ORTHO05D006134 4.4e-45 184.5 108 83.3
Phvul.003G141775 Phaseolus vulgaris HOM05D004410 ORTHO05D006134 4.4e-45 184.5 108 83.3
Aa31sc36G40 Aethionema arabicum HOM05D004410 ORTHO05D006134 5.8e-45 184.1 108 82.4
AL8G33250 Arabidopsis lyrata HOM05D004410 ORTHO05D006134 5.8e-45 184.1 108 82.4
Cfa013429 Carpinus fangiana HOM05D004410 ORTHO05D006134 5.8e-45 184.1 108 83.3
Lj7C624G8 Lonicera japonica HOM05D004410 ORTHO05D006134 5.8e-45 184.1 106 83.0
Potri.018G049800 Populus trichocarpa HOM05D004410 ORTHO05D006134 5.8e-45 184.1 107 84.1
CSS0020745 Camellia sinensis var. sinensis HOM05D004410 ORTHO05D006134 7.5e-45 183.7 106 84.0
Eucgr.C02260 Eucalyptus grandis HOM05D004410 ORTHO05D006134 7.5e-45 183.7 108 82.4
Glyma.17G060900 Glycine max HOM05D004410 ORTHO05D006134 7.5e-45 183.7 108 82.4
Lj5C681T1 Lonicera japonica HOM05D004410 ORTHO05D006134 9.8e-45 183.3 106 82.1
Oeu016123.1 Olea europaea HOM05D004410 ORTHO05D006134 9.8e-45 183.3 107 84.1
THA.LOC104817784 Tarenaya hassleriana HOM05D004410 ORTHO05D006134 9.8e-45 183.3 107 83.2
TAR383G0389 Trochodendron aralioides HOM05D004410 ORTHO05D006134 9.8e-45 183.3 105 84.8
PSO210G4717 Papaver somniferum HOM05D004410 ORTHO05D006134 1.3e-44 183.0 106 84.0
SalBow8G1532 Salvia bowleyana HOM05D004410 ORTHO05D006134 1.3e-44 183.0 107 84.1
CDE06G0833 Ceratophyllum demersum HOM05D004410 ORTHO05D006134 1.7e-44 182.6 108 80.6
Manes.06G021200 Manihot esculenta HOM05D004410 ORTHO05D006134 1.7e-44 182.6 107 83.2
Hund26318 Selenicereus undatus HOM05D004410 ORTHO05D006134 1.7e-44 182.6 108 81.5
EL10Ac8g18319 Beta vulgaris HOM05D004410 ORTHO05D006134 2.2e-44 182.2 108 83.3
Oeu038397.1 Olea europaea HOM05D004410 ORTHO05D006134 2.2e-44 182.2 108 82.4
SGA_v2.0_scaffold36G14352 Striga asiatica HOM05D004410 ORTHO05D006134 2.2e-44 182.2 108 82.4
Aqoxy3G03862 Aquilegia oxysepala HOM05D004410 ORTHO05D006134 2.9e-44 181.8 107 82.2
AT5G57280 Arabidopsis thaliana HOM05D004410 ORTHO05D006134 2.9e-44 181.8 108 81.5
Glyma.13G099200 Glycine max HOM05D004410 ORTHO05D006134 2.9e-44 181.8 108 82.4
Sabra03G0001500 Salix brachista HOM05D004410 ORTHO05D006134 2.9e-44 181.8 105 84.8
TPR.G5373 Trifolium pratense HOM05D004410 ORTHO05D006134 2.9e-44 181.8 108 82.4
Ah.09g230150 Amaranthus hybridus HOM05D004410 ORTHO05D006134 3.7e-44 181.4 108 82.4
Cc09_g07700 Coffea canephora HOM05D004410 ORTHO05D006134 3.7e-44 181.4 108 79.6
Mapoly0020s0093 Marchantia polymorpha HOM05D004410 ORTHO05D006134 3.7e-44 181.4 108 79.6
Psat0s4042g0040 Pisum sativum HOM05D004410 ORTHO05D006134 3.7e-44 181.4 108 82.4
MELO3C008923.2 Cucumis melo HOM05D004410 ORTHO05D006134 4.9e-44 181.0 108 79.6
Carub.0008s1778 Capsella rubella HOM05D004410 ORTHO05D006134 6.4e-44 180.6 108 80.6
Nitab4.5_0003040g0070 Nicotiana tabacum HOM05D004410 ORTHO05D006134 6.4e-44 180.6 107 81.3
CAN.G65.73 Capsicum annuum HOM05D004410 ORTHO05D006134 8.3e-44 180.3 106 82.1
Rhsim12G0146500 Rhododendron simsii HOM05D004410 ORTHO05D006134 8.3e-44 180.3 106 83.0
Sc14g0001390 Simmondsia chinensis HOM05D004410 ORTHO05D006134 8.3e-44 180.3 108 80.6
Solyc06g072250.3 Solanum lycopersicum HOM05D004410 ORTHO05D006134 8.3e-44 180.3 106 83.0
Sopen06g028570 Solanum pennellii HOM05D004410 ORTHO05D006134 8.3e-44 180.3 106 83.0
Ah.14g083650 Amaranthus hybridus HOM05D004410 ORTHO05D006134 1.1e-43 179.9 107 83.2
BcaB05g22331 Brassica carinata HOM05D004410 ORTHO05D006134 1.1e-43 179.9 108 80.6
Migut.D01496 Erythranthe guttata HOM05D004410 ORTHO05D006134 1.8e-43 179.1 108 81.5
Sed0003098 Sechium edule HOM05D004410 ORTHO05D006134 1.8e-43 179.1 108 79.6
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 2.4e-43 178.7 106 81.1
PGSC0003DMG400027051 Solanum tuberosum HOM05D004410 ORTHO05D006134 2.4e-43 178.7 106 81.1
TWI36G0301 Tripterygium wilfordii HOM05D004410 ORTHO05D006134 2.4e-43 178.7 107 82.2
vmacro16466 Vaccinium macrocarpon HOM05D004410 ORTHO05D006134 3.2e-43 178.3 103 83.5
ATR0561G198 Amborella trichopoda HOM05D004410 ORTHO05D006134 5.4e-43 177.6 108 78.7
AUR62021333 Chenopodium quinoa HOM05D004410 ORTHO05D006134 7.0e-43 177.2 108 79.6
AUR62033248 Chenopodium quinoa HOM05D004410 ORTHO05D006134 7.0e-43 177.2 108 79.6
Nitab4.5_0000033g0380 Nicotiana tabacum HOM05D004410 ORTHO05D006134 7.0e-43 177.2 106 81.1
Sabra03G0004700 Salix brachista HOM05D004410 ORTHO05D006134 7.0e-43 177.2 105 84.8
Nitab4.5_0000339g0120 Nicotiana tabacum HOM05D004410 ORTHO05D006134 9.2e-43 176.8 106 80.2
TPR.G26767 Trifolium pratense HOM05D004410 ORTHO05D006134 9.2e-43 176.8 108 78.7
Os02g0804300 Oryza sativa ssp. japonica HOM05D004410 ORTHO05D006134 1.2e-42 176.4 105 81.0
Zm00001eb258180 Zea mays HOM05D004410 ORTHO05D006134 1.2e-42 176.4 105 79.0
Prupe.1G079400 Prunus persica HOM05D004410 ORTHO05D006134 6.0e-42 174.1 106 77.4
FvH4_4g07620 Fragaria vesca HOM05D004410 ORTHO05D006134 7.8e-42 173.7 106 78.3
FAN07G0604 Fragaria x ananassa HOM05D004410 ORTHO05D006134 7.8e-42 173.7 106 78.3
FAN12G4072 Fragaria x ananassa HOM05D004410 ORTHO05D006134 7.8e-42 173.7 106 78.3
RcHm_v2.0_Chr4g0400231 Rosa chinensis HOM05D004410 ORTHO05D006134 7.8e-42 173.7 106 79.2
MD13G1245300 Malus domestica HOM05D004410 ORTHO05D006134 1.0e-41 173.3 106 78.3
FAN17G1447 Fragaria x ananassa HOM05D004410 ORTHO05D006134 1.3e-41 172.9 106 78.3
SEGI_20363 Sequoiadendron giganteum HOM05D004410 ORTHO05D006134 1.3e-41 172.9 107 77.6
FAN22G1351 Fragaria x ananassa HOM05D004410 ORTHO05D006134 1.7e-41 172.6 106 77.4
Pp3c12_7620 Physcomitrium patens HOM05D004410 ORTHO05D006134 1.7e-41 172.6 107 77.6
Medtr4g007420 Medicago truncatula HOM05D004410 ORTHO05D006134 3.0e-41 171.8 108 75.9
Nitab4.5_0000782g0050 Nicotiana tabacum HOM05D004410 ORTHO05D006134 3.0e-41 171.8 114 75.4
AagrBONN_evm.TU.Sc2ySwM_344.4914 Anthoceros agrestis HOM05D004410 ORTHO05D006134 5.0e-41 171.0 108 75.0
BcaC03g14169 Brassica carinata HOM05D004410 ORTHO05D006134 8.6e-41 170.2 111 76.6
C02p14420 Brassica napus HOM05D004410 ORTHO05D006134 8.6e-41 170.2 111 76.6
BolC2t07566H Brassica oleracea HOM05D004410 ORTHO05D006134 8.6e-41 170.2 111 76.6
CSS0004658 Camellia sinensis var. sinensis HOM05D004410 ORTHO05D006134 8.6e-41 170.2 106 79.2
PGR044G0126 Punica granatum HOM05D004410 ORTHO05D006134 1.5e-40 169.5 139 64.7
MD16G1253000 Malus domestica HOM05D004410 ORTHO05D006134 4.3e-40 167.9 107 76.6
CBR_g3667 Chara braunii HOM05D004410 ORTHO05D006134 6.2e-39 164.1 108 72.2
SMO367G1042 Selaginella moellendorffii HOM05D004410 ORTHO05D006134 4.0e-38 161.4 106 74.5
AagrBONN_evm.TU.Sc2ySwM_344.3468 Anthoceros agrestis HOM05D004410 ORTHO05D006134 1.2e-37 159.8 108 68.5
Cre09.g398104 Chlamydomonas reinhardtii HOM05D004410 ORTHO05D006134 3.7e-36 154.8 104 71.2
MCO01G124 Micromonas commoda HOM05D004410 ORTHO05D006134 1.5e-32 142.9 104 65.4
PSO210G2992 Papaver somniferum HOM05D004410 ORTHO05D006134 2.5e-32 142.1 85 80.0
Peaxi162Scf00171g00233 Petunia axillaris HOM05D004410 ORTHO05D006134 2.5e-32 142.1 84 81.0
ClCG11G007510 Citrullus lanatus HOM05D004410 ORTHO05D006134 6.2e-31 137.5 108 67.6
MBI13_g31549_MAGBIO Magnolia biondii HOM05D004410 ORTHO05D006134 1.1e-30 136.7 107 66.4
BraA03t10599Z Brassica rapa HOM05D004410 ORTHO05D006134 2.6e-29 132.1 76 82.9
PRCOL_00001013 Prasinoderma coloniale HOM05D004410 ORTHO05D006134 1.4e-27 126.3 105 57.1
Atru.chr12.1677 Acer truncatum HOM05D004410 ORTHO05D006134 9.2e-27 123.6 108 61.1
C03p79720 Brassica napus HOM05D004410 ORTHO05D027626 2.1e-26 122.5 73 79.5
BolC5t31886H Brassica oleracea HOM05D004410 ORTHO05D027626 2.1e-26 122.5 73 79.5
BcaC05g27254 Brassica carinata HOM05D004410 ORTHO05D027626 7.8e-26 120.6 72 79.2
Haze_27417 Corylus avellana HOM05D004410 ORTHO05D006134 2.1e-23 112.5 109 54.1
Ca_20535_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 1.9e-19 99.4 72 68.1
Ca_20536_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 1.9e-19 99.4 72 68.1
Ca_30867_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 1.9e-19 99.4 72 68.1
Medtr4g127640 Medicago truncatula HOM05D004410 ORTHO05D006134 9.2e-19 97.1 54 81.5
Glyma.17G179900 Glycine max HOM05D004410 ORTHO05D027626 1.0e-17 93.6 50 84.0
CAN.G65.105 Capsicum annuum HOM05D004410 ORTHO05D006134 5.6e-16 87.8 54 72.2
Cfa026974 Carpinus fangiana HOM05D004410 ORTHO05D006134 1.6e-15 86.3 75 62.7
Medtr4g007390 Medicago truncatula HOM05D004410 ORTHO05D006134 2.4e-14 82.4 59 67.8
MCO02G313 Micromonas commoda HOM05D004410 ORTHO05D006134 4.0e-14 81.6 95 49.5
Peaxi162Scf03693g00003 Petunia axillaris HOM05D004410 ORTHO05D006134 1.4e-11 73.2 55 63.6
GSVIVG01006242001 Vitis vinifera HOM05D004410 ORTHO05D006134 2.7e-10 68.9 58 62.1
Ca_20516_v3 Cicer arietinum L. HOM05D004410 ORTHO05D147600 1.0e-09 67.0 44 68.2


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