Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 1.8e-260 902.1 474 100.0
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 6.9e-172 607.8 475 65.3
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 3.4e-171 605.5 478 67.6
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 5.9e-171 604.7 475 64.4
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.3e-170 603.6 474 65.0
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.7e-170 603.2 461 67.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 2.2e-170 602.8 476 64.9
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 2.9e-170 602.4 477 69.6
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 6.5e-170 601.3 475 64.4
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 8.5e-170 600.9 474 65.2
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.9e-169 599.7 471 64.3
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.7e-168 595.9 475 63.6
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.7e-168 595.9 477 64.8
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 1.0e-167 594.0 475 65.1
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 5.2e-167 591.7 477 64.4
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 8.8e-167 590.9 474 64.3
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.0e-166 589.7 474 63.7
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.7e-166 588.2 475 64.4
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.3e-165 587.0 483 62.9
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.3e-165 587.0 476 63.4
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 2.2e-165 586.3 474 62.7
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 2.8e-165 585.9 474 65.4
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.1e-164 583.9 474 62.2
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.1e-164 583.9 476 62.8
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 7.0e-164 581.3 476 63.9
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.0e-162 577.4 474 64.1
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 6.5e-162 574.7 474 62.9
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 6.5e-162 574.7 474 64.1
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.1e-161 573.9 453 64.9
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 1.9e-161 573.2 474 65.4
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 4.2e-161 572.0 474 62.7
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 9.4e-161 570.9 469 62.0
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 3.0e-159 565.8 480 60.4
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.0e-159 565.8 474 61.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 8.8e-159 564.3 459 63.8
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.3e-157 560.5 459 62.7
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 6.3e-157 558.1 575 53.7
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 3.1e-156 555.8 460 63.3
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 1.6e-155 553.5 399 70.4
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 3.8e-154 548.9 480 61.2
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.5e-153 546.2 471 59.9
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 1.2e-152 543.9 477 60.0
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.1e-152 543.1 423 65.2
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 6.1e-152 541.6 472 60.0
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.3e-151 539.7 471 59.2
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.0e-151 539.3 472 59.1
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 3.0e-151 539.3 514 56.8
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.2e-151 538.5 468 59.8
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 6.8e-151 538.1 477 59.1
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 4.4e-150 535.4 480 58.8
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 9.8e-150 534.3 464 59.5
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 4.8e-149 531.9 480 59.4
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 6.3e-149 531.6 481 58.2
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 6.3e-149 531.6 484 57.6
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.1e-148 530.8 481 58.2
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 1.8e-148 530.0 471 58.0
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 2.4e-148 529.6 473 59.8
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 2.4e-148 529.6 481 58.4
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.4e-148 529.6 493 56.0
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 4.1e-148 528.9 492 56.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 9.1e-148 527.7 423 62.9
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 7.7e-147 524.6 473 59.0
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.7e-146 523.5 423 63.8
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.7e-146 523.5 442 61.8
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 3.8e-146 522.3 423 63.1
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 3.8e-146 522.3 522 55.0
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 5.0e-146 521.9 453 59.4
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 8.6e-146 521.2 479 56.6
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 1.6e-144 516.9 476 58.6
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 4.7e-144 515.4 434 62.2
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 4.7e-144 515.4 479 58.5
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 6.1e-144 515.0 430 61.2
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 6.1e-144 515.0 469 57.1
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.3e-143 513.1 424 62.7
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 6.8e-143 511.5 502 55.4
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 2.0e-142 510.0 432 61.6
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.7e-141 506.9 394 66.2
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 2.8e-141 506.1 400 64.0
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.8e-140 503.4 417 60.2
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 7.8e-139 498.0 465 57.4
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.5e-137 493.0 337 73.0
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 2.1e-136 490.0 454 58.6
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.0e-135 487.6 385 65.5
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 4.9e-133 478.8 474 54.2
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 8.3e-133 478.0 477 53.7
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 8.3e-133 478.0 484 54.8
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.1e-128 463.4 455 53.4
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 2.8e-128 463.0 397 59.2
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 2.8e-128 463.0 380 62.6
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 3.6e-128 462.6 452 53.8
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 8.3e-125 451.4 362 64.6
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 5.6e-121 438.7 425 53.9
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.6e-118 429.9 432 55.1
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 9.9e-118 427.9 429 54.5
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.4e-116 424.1 325 70.5
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 4.7e-112 409.1 422 52.6
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 3.2e-108 396.4 353 58.1
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 3.2e-108 396.4 353 58.1
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 2.7e-99 366.7 448 45.8
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.9e-98 362.8 423 46.8
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.6e-96 357.5 299 65.2
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 1.1e-92 344.7 350 52.9
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 6.0e-91 339.0 235 69.4
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 1.4e-84 317.8 258 62.4
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.0e-82 311.6 350 48.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.3e-81 306.6 230 65.2
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 9.0e-79 298.5 414 45.9
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.1e-71 275.0 454 40.5
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.8e-71 274.2 463 36.3
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.7e-64 251.1 349 41.8
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.8e-61 240.0 233 54.9
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.7e-59 233.0 387 40.6
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.6e-57 227.3 302 45.4
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 3.0e-50 203.8 179 58.1
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 2.0e-49 201.1 160 66.2
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 2.0e-49 201.1 160 66.2
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 2.8e-48 197.2 181 57.5
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 2.0e-46 191.0 152 65.1
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.5e-46 189.9 232 48.3
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 1.5e-41 174.9 424 28.3
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.0e-38 164.5 148 54.7
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 3.2e-36 157.1 128 60.9
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.0e-34 152.1 147 53.7
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.5e-33 146.0 103 70.9
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 8.6e-29 132.5 116 59.5
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 3.3e-20 104.0 252 31.3
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 2.3e-18 97.8 67 71.6
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 2.0e-17 94.7 116 51.7
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-15 89.0 69 60.9
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.5e-12 78.6 52 71.2
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.5e-12 77.8 52 71.2
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 2.3e-10 71.2 99 44.4


User provided reference genes

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