Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 0.0e+00 1159.4 597 100.0
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.6e-253 879.4 603 75.5
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 5.9e-253 877.5 602 75.4
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 5.2e-249 864.4 605 74.5
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 2.0e-248 862.4 605 72.6
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 7.5e-248 860.5 604 73.2
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 3.1e-246 855.1 601 72.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 5.4e-246 854.4 598 71.9
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 1.3e-244 849.7 603 72.5
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 1.1e-243 846.7 598 71.1
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 2.1e-242 842.4 603 71.1
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 1.8e-241 839.3 607 70.7
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.3e-241 839.0 599 70.5
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 4.0e-241 838.2 602 71.1
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.2e-240 836.6 600 70.5
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.4e-240 835.1 604 70.7
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 7.5e-240 833.9 603 71.6
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 7.5e-240 833.9 596 71.6
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 3.7e-239 831.6 597 71.2
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 3.7e-239 831.6 618 69.6
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 1.2e-237 826.6 598 70.7
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 3.5e-237 825.1 603 70.0
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 5.9e-237 824.3 597 70.9
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 1.1e-235 820.1 596 71.0
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 1.9e-235 819.3 595 68.6
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 7.3e-235 817.4 605 69.8
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 7.3e-235 817.4 602 69.8
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 9.5e-235 817.0 595 68.7
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 9.5e-235 817.0 602 69.3
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 1.6e-234 816.2 603 69.3
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 5.2e-233 811.2 602 70.1
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 6.8e-233 810.8 616 68.8
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 6.8e-233 810.8 633 66.4
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.2e-232 810.1 630 67.0
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.5e-232 809.7 604 69.5
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 3.7e-231 805.1 597 69.2
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.4e-230 803.1 606 68.3
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 6.0e-229 797.7 600 68.8
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 7.8e-229 797.3 598 68.2
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.7e-228 796.2 596 69.1
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 6.6e-228 794.3 608 68.8
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 8.6e-228 793.9 596 68.3
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.9e-227 792.7 602 67.8
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 1.9e-227 792.7 593 68.5
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 2.5e-227 792.3 602 68.9
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 1.6e-226 789.6 597 68.3
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 2.1e-226 789.3 597 68.2
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.2e-226 787.7 602 67.6
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.8e-225 786.2 603 67.5
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.8e-225 786.2 595 68.9
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 3.1e-225 785.4 565 70.6
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 3.1e-225 785.4 590 68.3
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.2e-224 783.5 599 68.4
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 2.6e-224 782.3 607 67.5
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 2.6e-224 782.3 595 68.1
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 7.5e-224 780.8 601 67.6
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 1.3e-223 780.0 600 67.2
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 2.2e-223 779.2 589 68.8
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.2e-223 779.2 594 67.5
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 2.2e-223 779.2 603 67.3
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 4.9e-223 778.1 600 67.0
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 6.4e-223 777.7 594 67.5
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 8.3e-223 777.3 602 65.6
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 8.3e-223 777.3 594 68.2
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 2.4e-222 775.8 609 65.8
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 2.4e-222 775.8 594 67.2
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 2.4e-222 775.8 603 66.8
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 6.0e-221 771.2 600 65.2
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.0e-220 770.4 596 65.8
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 3.9e-220 768.5 585 68.2
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.9e-219 766.1 599 66.9
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 2.5e-219 765.8 603 65.3
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 4.3e-219 765.0 604 66.4
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 5.6e-219 764.6 597 65.5
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.6e-218 763.1 611 64.8
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 4.7e-218 761.5 599 66.3
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 6.2e-218 761.1 603 66.2
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 6.2e-218 761.1 599 65.8
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 6.2e-218 761.1 598 65.4
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 1.4e-217 760.0 604 64.7
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.8e-217 759.6 602 65.4
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 7.6e-216 754.2 554 69.7
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 9.9e-216 753.8 619 63.2
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.7e-215 753.1 595 65.9
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 4.9e-215 751.5 605 65.3
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 6.4e-215 751.1 595 65.7
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 1.9e-214 749.6 596 63.8
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.9e-214 749.6 609 64.9
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 4.6e-213 745.0 606 64.9
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 7.8e-213 744.2 606 63.9
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 3.0e-212 742.3 542 70.7
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 3.9e-212 741.9 609 64.2
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 6.6e-212 741.1 595 63.2
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 4.3e-211 738.4 606 64.2
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 4.7e-210 734.9 602 64.6
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.1e-209 733.8 599 62.9
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.8e-209 733.0 596 63.8
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 3.1e-209 732.3 595 65.5
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 1.5e-208 729.9 598 61.4
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 8.4e-207 724.2 602 63.6
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.1e-206 723.8 520 68.5
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 5.4e-206 721.5 602 63.5
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.4e-206 721.5 602 63.5
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.7e-204 716.5 602 63.1
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.3e-204 716.1 597 60.6
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 7.3e-203 711.1 602 63.0
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 3.6e-202 708.8 599 61.9
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 6.2e-202 708.0 613 61.3
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 3.8e-199 698.7 599 63.1
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 2.1e-197 693.0 521 68.3
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 1.5e-195 686.8 600 61.3
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 4.8e-194 681.8 592 61.0
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.6e-192 676.0 595 59.5
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 9.9e-192 674.1 595 61.2
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 6.7e-188 661.4 585 60.0
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 4.0e-185 652.1 598 57.2
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 5.3e-185 651.7 597 57.5
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 6.3e-178 628.2 600 58.0
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 9.4e-166 587.8 604 55.3
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 3.9e-164 582.4 592 53.5
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 4.4e-163 578.9 599 52.3
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 8.2e-162 574.7 470 63.8
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 2.6e-160 569.7 624 50.0
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 2.6e-147 526.6 601 48.4
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 2.8e-146 523.1 442 62.4
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 5.0e-135 485.7 583 48.4
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 9.5e-134 481.5 394 67.0
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.1e-121 441.4 511 49.1
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-120 438.0 318 72.6
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 7.8e-120 435.3 454 50.0
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.3e-119 433.7 358 65.1
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.5e-118 431.0 628 41.4
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.1e-116 424.9 323 66.3
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 1.4e-105 387.9 611 41.2
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-100 370.9 355 59.7
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 3.6e-85 320.1 267 62.9
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 1.8e-79 301.2 615 34.5
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 1.8e-71 274.6 197 70.6
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 5.1e-71 273.1 490 38.0
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 5.6e-70 269.6 183 71.6
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 9.3e-65 252.3 222 57.2
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.2e-59 235.3 162 70.4
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-55 221.5 136 72.1
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 1.8e-47 194.9 379 37.7
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.1e-41 175.6 118 73.7
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 6.1e-40 169.9 144 61.1
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 4.1e-36 157.1 115 69.6
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 5.3e-36 156.8 115 69.6
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 6.5e-34 149.8 182 51.6
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 4.4e-30 137.1 134 58.2
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.3e-29 135.6 91 70.3
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.7e-29 134.0 91 69.2
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 1.1e-28 132.5 80 77.5
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 4.1e-28 130.6 206 46.1
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 7.0e-28 129.8 76 76.3
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 1.5e-22 112.1 82 65.9
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 3.4e-22 110.9 180 42.2
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 7.7e-19 99.8 135 44.4
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.3e-18 99.0 104 56.7
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 8.0e-16 89.7 71 62.0
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 2.6e-14 84.7 63 66.7
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 1.6e-11 75.5 56 57.1
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 6.6e-10 70.1 142 37.3
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 2.3e-07 61.6 34 79.4
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 5.2e-07 60.5 34 82.4
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 6.8e-07 60.1 41 68.3
Sc03g0007490 Simmondsia chinensis HOM05D004159 ORTHO05D388831 2.6e-06 58.2 91 44.0


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