Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1790 Cannabis sativa HOM05D000104 ORTHO05D005769 1.2e-136 490.3 358 100.0
QL07p023509 Quercus lobata HOM05D000104 ORTHO05D005769 2.8e-96 356.3 266 75.2
Potri.001G207700 Populus trichocarpa HOM05D000104 ORTHO05D005769 6.1e-96 355.1 259 79.2
Dinv19274 Davidia involucrata HOM05D000104 ORTHO05D005769 6.8e-95 351.7 268 74.6
Prupe.4G135700 Prunus persica HOM05D000104 ORTHO05D005769 7.5e-94 348.2 266 77.4
Glyma.02G174100 Glycine max HOM05D000104 ORTHO05D005769 9.8e-94 347.8 261 75.5
Glyma.09G112200 Glycine max HOM05D000104 ORTHO05D005769 2.8e-93 346.3 268 78.0
CiPaw.09G030900 Carya illinoinensis HOM05D000104 ORTHO05D005769 1.4e-92 344.0 259 76.8
MELO3C009633.2 Cucumis melo HOM05D000104 ORTHO05D005769 2.4e-92 343.2 251 75.3
Sabra01G0160500 Salix brachista HOM05D000104 ORTHO05D005769 3.1e-92 342.8 257 75.1
CsaV3_3G038900 Cucumis sativus L. HOM05D000104 ORTHO05D005769 7.0e-92 341.7 269 72.1
Phvul.007G259200 Phaseolus vulgaris HOM05D000104 ORTHO05D005769 2.7e-91 339.7 269 77.0
Thecc.05G185200 Theobroma cacao HOM05D000104 ORTHO05D005769 2.7e-91 339.7 265 74.0
Ciclev10010891m.g Citrus clementina HOM05D000104 ORTHO05D005769 5.9e-91 338.6 287 67.6
Gohir.A08G227300 Gossypium hirsutum HOM05D000104 ORTHO05D005769 5.9e-91 338.6 270 72.6
PGR142G4395 Punica granatum HOM05D000104 ORTHO05D005769 1.0e-90 337.8 249 76.7
Gorai.004G264200 Gossypium raimondii HOM05D000104 ORTHO05D005769 1.7e-90 337.0 270 71.9
Dinv14287 Davidia involucrata HOM05D000104 ORTHO05D005769 2.9e-90 336.3 277 69.7
Atru.chr8.1089 Acer truncatum HOM05D000104 ORTHO05D005769 3.8e-90 335.9 270 74.1
VMungo0720G3110 Vigna mungo HOM05D000104 ORTHO05D005769 3.8e-90 335.9 268 76.1
Duzib177G0813 Durio zibethinus HOM05D000104 ORTHO05D005769 5.0e-90 335.5 262 75.2
TWI23G0183 Tripterygium wilfordii HOM05D000104 ORTHO05D005769 8.6e-90 334.7 275 74.2
RcHm_v2.0_Chr5g0025621 Rosa chinensis HOM05D000104 ORTHO05D005769 1.1e-89 334.3 267 76.4
Sc11g0006160 Simmondsia chinensis HOM05D000104 ORTHO05D005769 1.1e-89 334.3 285 68.1
CiPaw.10G027000 Carya illinoinensis HOM05D000104 ORTHO05D005769 1.9e-89 333.6 270 75.6
Ca_25705_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005769 2.5e-89 333.2 268 72.4
FvH4_3g15170 Fragaria vesca HOM05D000104 ORTHO05D005769 2.5e-89 333.2 261 76.6
Cc06_g16020 Coffea canephora HOM05D000104 ORTHO05D005769 3.3e-89 332.8 273 70.3
MD10G1206600 Malus domestica HOM05D000104 ORTHO05D005769 4.3e-89 332.4 271 74.5
Sabra03G0014100 Salix brachista HOM05D000104 ORTHO05D005769 7.3e-89 331.6 258 73.3
FAN25G3235 Fragaria x ananassa HOM05D000104 ORTHO05D005769 2.8e-88 329.7 250 78.8
Potri.003G022100 Populus trichocarpa HOM05D000104 ORTHO05D005769 2.3e-87 326.6 259 75.3
TPR.G27751 Trifolium pratense HOM05D000104 ORTHO05D005769 4.0e-87 325.9 274 73.0
TWI14G1199 Tripterygium wilfordii HOM05D000104 ORTHO05D005769 4.0e-87 325.9 256 74.2
Lalb_Chr21g0316431 Lupinus albus HOM05D000104 ORTHO05D005769 6.8e-87 325.1 269 73.2
Rhsim03G0007000 Rhododendron simsii HOM05D000104 ORTHO05D005769 8.9e-87 324.7 263 71.5
Medtr1g053955 Medicago truncatula HOM05D000104 ORTHO05D005769 1.5e-86 323.9 275 72.0
GSVIVG01033511001 Vitis vinifera HOM05D000104 ORTHO05D005769 2.0e-86 323.6 275 71.3
MSTRG.19900 Avicennia marina HOM05D000104 ORTHO05D005769 7.5e-86 321.6 267 71.2
Nitab4.5_0003890g0020 Nicotiana tabacum HOM05D000104 ORTHO05D005769 1.3e-85 320.9 283 66.4
Psat4g106680 Pisum sativum HOM05D000104 ORTHO05D005769 2.4e-84 316.6 268 70.9
Migut.J01827 Erythranthe guttata HOM05D000104 ORTHO05D005769 3.2e-84 316.2 274 68.2
Lj5g0023468 Lotus japonicus HOM05D000104 ORTHO05D005769 7.0e-84 315.1 247 75.3
CAN.G570.8 Capsicum annuum HOM05D000104 ORTHO05D005769 1.3e-82 310.8 269 66.2
Solyc03g063220.2 Solanum lycopersicum HOM05D000104 ORTHO05D005769 1.7e-82 310.5 253 68.0
Manes.15G110200 Manihot esculenta HOM05D000104 ORTHO05D005769 3.0e-82 309.7 235 74.5
Actinidia22030 Actinidia chinensis HOM05D000104 ORTHO05D005769 5.0e-82 308.9 249 71.1
Sopen03g015780 Solanum pennellii HOM05D000104 ORTHO05D005769 5.0e-82 308.9 253 68.4
FAN11G3896 Fragaria x ananassa HOM05D000104 ORTHO05D005769 3.3e-81 306.2 250 74.8
HanXRQChr01g0026921 Helianthus annuus HOM05D000104 ORTHO05D005769 5.6e-81 305.4 262 69.5
Eucgr.K01834 Eucalyptus grandis HOM05D000104 ORTHO05D005769 7.3e-81 305.1 273 66.7
Peaxi162Scf00258g00431 Petunia axillaris HOM05D000104 ORTHO05D005769 1.2e-80 304.3 230 72.6
TAR381G0643 Trochodendron aralioides HOM05D000104 ORTHO05D005769 2.8e-80 303.1 276 68.5
FAN21G3997 Fragaria x ananassa HOM05D000104 ORTHO05D005769 8.0e-80 301.6 250 74.0
unitig_26.g9068 Utricularia gibba HOM05D000104 ORTHO05D005769 1.1e-79 301.2 250 68.0
PSO170G6710 Papaver somniferum HOM05D000104 ORTHO05D005769 3.1e-79 299.7 319 58.6
PSO528G0284 Papaver somniferum HOM05D000104 ORTHO05D005769 8.9e-79 298.1 319 58.3
ECA248G0087 Erigeron canadensis HOM05D000104 ORTHO05D005769 2.6e-78 296.6 252 71.0
THA.LOC104826283 Tarenaya hassleriana HOM05D000104 ORTHO05D005769 7.5e-78 295.0 250 68.8
ClCG10G017460 Citrullus lanatus HOM05D000104 ORTHO05D005769 9.8e-78 294.7 261 67.0
AT3G12810 Arabidopsis thaliana HOM05D000104 ORTHO05D005769 1.3e-77 294.3 283 64.7
Aqoxy4G02068 Aquilegia oxysepala HOM05D000104 ORTHO05D005769 1.7e-77 293.9 271 64.9
Nitab4.5_0000324g0220 Nicotiana tabacum HOM05D000104 ORTHO05D005769 1.7e-77 293.9 330 56.7
arahy.Tifrunner.gnm1.ann1.2E0FT9 Arachis hypogaea HOM05D000104 ORTHO05D005769 6.4e-77 292.0 253 71.9
Thhalv10019875m.g Eutrema salsugineum HOM05D000104 ORTHO05D005769 6.4e-77 292.0 283 64.3
arahy.Tifrunner.gnm1.ann1.52E2E0 Arachis hypogaea HOM05D000104 ORTHO05D005769 1.4e-76 290.8 253 71.5
Hund17598 Selenicereus undatus HOM05D000104 ORTHO05D005769 1.4e-76 290.8 315 60.0
AL3G24490 Arabidopsis lyrata HOM05D000104 ORTHO05D005769 1.9e-76 290.4 281 64.1
HanXRQChr11g0348031 Helianthus annuus HOM05D000104 ORTHO05D005769 7.0e-76 288.5 274 64.2
Carub.0003s1217 Capsella rubella HOM05D000104 ORTHO05D005769 1.2e-75 287.7 279 61.3
Aa31LG8G90 Aethionema arabicum HOM05D000104 ORTHO05D005769 4.6e-75 285.8 243 65.4
ATR1152G044 Amborella trichopoda HOM05D000104 ORTHO05D005769 3.0e-74 283.1 271 62.7
Zm00001eb187690 Zea mays HOM05D000104 ORTHO05D005769 1.1e-73 281.2 245 63.3
BolC5t34177H Brassica oleracea HOM05D000104 ORTHO05D005769 3.3e-73 279.6 258 65.1
BcaC05g29235 Brassica carinata HOM05D000104 ORTHO05D005769 7.3e-73 278.5 262 64.1
MBI16_g14599_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 9.5e-73 278.1 252 66.3
SHI16560 Sapria himalayana HOM05D000104 ORTHO05D005769 1.2e-72 277.7 230 69.1
A05p36660 Brassica napus HOM05D000104 ORTHO05D005769 1.6e-72 277.3 262 64.1
BraA05t22469Z Brassica rapa HOM05D000104 ORTHO05D005769 1.6e-72 277.3 262 64.1
Zm00001eb251100 Zea mays HOM05D000104 ORTHO05D005769 2.8e-72 276.6 268 59.3
BcaB06g25509 Brassica carinata HOM05D000104 ORTHO05D005769 3.6e-72 276.2 261 64.8
C05p55090 Brassica napus HOM05D000104 ORTHO05D005769 8.1e-72 275.0 262 63.4
Gohir.D08G247700 Gossypium hirsutum HOM05D000104 ORTHO05D005769 2.3e-71 273.5 221 72.9
Oeu033742.2 Olea europaea HOM05D000104 ORTHO05D005769 4.0e-71 272.7 286 58.7
SGA_v2.0_scaffold69G23071 Striga asiatica HOM05D000104 ORTHO05D005769 6.8e-71 271.9 259 64.1
HPP92_024595 Vanilla planifolia HOM05D000104 ORTHO05D005769 7.5e-70 268.5 248 62.1
SGA_v2.0_scaffold105G30483 Striga asiatica HOM05D000104 ORTHO05D005769 8.3e-69 265.0 269 62.5
Nn5g28295 Nelumbo nucifera HOM05D000104 ORTHO05D005769 2.4e-68 263.5 263 61.2
Ah.13g077720 Amaranthus hybridus HOM05D000104 ORTHO05D005769 9.2e-68 261.5 288 56.2
Haze_19977 Corylus avellana HOM05D000104 ORTHO05D005769 1.6e-67 260.8 254 66.9
Sed0012301 Sechium edule HOM05D000104 ORTHO05D005769 3.5e-67 259.6 251 62.5
CDE05G0740 Ceratophyllum demersum HOM05D000104 ORTHO05D005769 4.6e-67 259.2 200 73.5
CSS0012736 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D005769 9.5e-65 251.5 274 58.4
DCAR_006645 Daucus carota HOM05D000104 ORTHO05D005769 1.2e-62 244.6 258 58.1
EL10Ac3g07414 Beta vulgaris HOM05D000104 ORTHO05D005769 6.4e-61 238.8 274 59.5
AUR62018509 Chenopodium quinoa HOM05D000104 ORTHO05D005769 2.1e-59 233.8 279 54.8
Lsat_1_v5_gn_1_55460 Lactuca sativa HOM05D000104 ORTHO05D005769 3.5e-59 233.0 271 55.0
SalBow6G1274 Salvia bowleyana HOM05D000104 ORTHO05D005769 4.6e-59 232.6 286 55.2
Oeu063882.1 Olea europaea HOM05D000104 ORTHO05D005769 4.0e-55 219.5 145 79.3
MBI10_g44388_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 3.9e-50 203.0 251 55.8
Pp3c10_13800 Physcomitrium patens HOM05D000104 ORTHO05D005769 4.8e-48 196.1 270 49.3
MBI10_g00720_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 2.2e-45 187.2 110 85.5
Mapoly0111s0052 Marchantia polymorpha HOM05D000104 ORTHO05D005769 1.3e-42 177.9 272 47.1
AagrBONN_evm.TU.Sc2ySwM_340.21 Anthoceros agrestis HOM05D000104 ORTHO05D005769 2.1e-40 170.6 125 66.4
AUR62020910 Chenopodium quinoa HOM05D000104 ORTHO05D005769 1.8e-39 167.5 254 47.2
COL.COLO4_22907 Corchorus olitorius HOM05D000104 ORTHO05D005769 5.5e-36 156.0 277 45.5
Lj3A919G40 Lonicera japonica HOM05D000104 ORTHO05D005769 1.8e-34 151.0 85 88.2
Lj3C921T8 Lonicera japonica HOM05D000104 ORTHO05D005769 2.4e-31 140.6 159 58.5
Lj3C919G8 Lonicera japonica HOM05D000104 ORTHO05D005769 9.0e-31 138.7 164 56.1
Cpa.g.c39138 Carica papaya HOM05D000104 ORTHO05D005769 6.7e-26 122.5 63 95.2
Pp3c3_30220 Physcomitrium patens HOM05D000104 ORTHO05D005769 6.7e-26 122.5 191 46.1
CBR_g19274 Chara braunii HOM05D000104 ORTHO05D005769 8.2e-24 115.5 144 48.6
Lj3C921G6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-23 114.4 65 86.2
MCO13G222 Micromonas commoda HOM05D000104 ORTHO05D005769 7.7e-22 109.0 234 36.3
MCO13G223 Micromonas commoda HOM05D000104 ORTHO05D005769 7.7e-22 109.0 234 36.3
MBI10_g00718_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 1.7e-21 107.8 140 59.3
Cre14.g618860 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D005769 2.2e-21 107.5 137 43.1
PRCOL_00002928 Prasinoderma coloniale HOM05D000104 ORTHO05D005769 7.9e-19 99.0 261 31.8
Hma1.2p1_0784F.1_g217140 Hydrangea macrophylla HOM05D000104 ORTHO05D005769 1.8e-10 71.2 108 53.7
MSTRG.12779 Avicennia marina HOM05D002628 ORTHO05D002785 1.5e-09 68.2 119 39.5
SalBow3G0995 Salvia bowleyana HOM05D002628 ORTHO05D002785 6.3e-08 62.8 112 37.5
Ciclev10018446m.g Citrus clementina HOM05D002628 ORTHO05D002785 1.4e-07 61.6 122 39.3
CANSAT01G2524 Cannabis sativa HOM05D002628 ORTHO05D002785 1.8e-07 61.2 103 41.7
SGA_v2.0_scaffold6G03236 Striga asiatica HOM05D002628 ORTHO05D002785 5.3e-07 59.7 120 35.0
VMungo1215G2695 Vigna mungo HOM05D008141 ORTHO05D008631 5.3e-07 59.7 85 47.1
CBR_g6670 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-07 59.3 121 35.5
Gohir.A11G137900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 9.1e-07 58.9 104 42.3
Manes.12G045400 Manihot esculenta HOM05D002628 ORTHO05D002785 9.1e-07 58.9 103 38.8
Oeu004073.1 Olea europaea HOM05D002628 ORTHO05D002785 9.1e-07 58.9 145 34.5
Atru.chr5.2101 Acer truncatum HOM05D002628 ORTHO05D002785 1.2e-06 58.5 101 39.6
MSTRG.18000 Avicennia marina HOM05D002628 ORTHO05D002785 1.2e-06 58.5 124 33.1
COL.COLO4_15677 Corchorus olitorius HOM05D002628 ORTHO05D002785 1.2e-06 58.5 100 41.0
Migut.N00621 Erythranthe guttata HOM05D002628 ORTHO05D002785 1.2e-06 58.5 101 36.6
Gorai.007G155000 Gossypium raimondii HOM05D002628 ORTHO05D002785 1.5e-06 58.2 104 41.3
Sabra14G0142700 Salix brachista HOM05D002628 ORTHO05D002785 1.5e-06 58.2 100 40.0
SalBow6G2694 Salvia bowleyana HOM05D002628 ORTHO05D002785 2.0e-06 57.8 130 34.6
SalBow6G7039 Salvia bowleyana HOM05D002628 ORTHO05D002785 2.0e-06 57.8 130 34.6
SGA_v2.0_scaffold3G01640 Striga asiatica HOM05D002628 ORTHO05D002785 2.0e-06 57.8 137 34.3
Duzib211G0579 Durio zibethinus HOM05D002628 ORTHO05D002785 2.6e-06 57.4 103 39.8
AUR62001094 Chenopodium quinoa HOM05D002628 ORTHO05D002785 4.5e-06 56.6 106 39.6
Eucgr.H00795 Eucalyptus grandis HOM05D002628 ORTHO05D002785 4.5e-06 56.6 83 37.3
Prupe.8G201800 Prunus persica HOM05D002628 ORTHO05D002785 4.5e-06 56.6 88 42.0
Thecc.01G224600 Theobroma cacao HOM05D002628 ORTHO05D002785 4.5e-06 56.6 103 38.8
BcaB08g34428 Brassica carinata HOM05D002628 ORTHO05D002785 5.9e-06 56.2 79 39.2
CDE07G1586 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 5.9e-06 56.2 95 36.8
Gohir.D11G144700 Gossypium hirsutum HOM05D002628 ORTHO05D002785 5.9e-06 56.2 104 40.4
Nitab4.5_0003758g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 5.9e-06 56.2 116 37.9
TWI36G1593 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 5.9e-06 56.2 119 37.8
TWI75G1871 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 5.9e-06 56.2 99 37.4
BolC3t17684H Brassica oleracea HOM05D002628 ORTHO05D002785 7.7e-06 55.8 79 39.2
DCAR_018575 Daucus carota HOM05D002628 ORTHO05D002785 7.7e-06 55.8 81 40.7
Duzib133G0258 Durio zibethinus HOM05D002628 ORTHO05D002785 7.7e-06 55.8 103 39.8
Pp3c7_10800 Physcomitrium patens HOM05D002628 ORTHO05D002785 7.7e-06 55.8 88 36.4


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