Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1489 Cannabis sativa HOM05D007657 ORTHO05D009471 4.4e-179 631.3 354 100.0
ClCG02G001620 Citrullus lanatus HOM05D007657 ORTHO05D009471 3.6e-32 143.3 343 38.5
CsaV3_7G003870 Cucumis sativus L. HOM05D007657 ORTHO05D009471 6.2e-32 142.5 335 36.7
Dinv18547 Davidia involucrata HOM05D007657 ORTHO05D009471 8.1e-32 142.1 380 33.7
MELO3C018792.2 Cucumis melo HOM05D007657 ORTHO05D009471 1.4e-31 141.4 341 36.7
Prupe.3G222500 Prunus persica HOM05D007657 ORTHO05D009471 3.4e-30 136.7 276 42.8
Gorai.005G208700 Gossypium raimondii HOM05D007657 ORTHO05D009471 2.9e-29 133.7 266 39.5
Ca_01565_v3 Cicer arietinum L. HOM05D007657 ORTHO05D009471 3.7e-29 133.3 128 54.7
Gohir.D02G186500 Gossypium hirsutum HOM05D007657 ORTHO05D009471 4.9e-29 132.9 302 36.4
CiPaw.03G164200 Carya illinoinensis HOM05D007657 ORTHO05D009471 6.4e-29 132.5 364 33.2
VMungo1080G1905 Vigna mungo HOM05D007657 ORTHO05D009471 8.3e-29 132.1 138 51.4
Oeu034340.1 Olea europaea HOM05D007657 ORTHO05D009471 1.4e-28 131.3 123 57.7
Sed0004603 Sechium edule HOM05D007657 ORTHO05D009471 3.2e-28 130.2 332 34.9
Duzib052G0340 Durio zibethinus HOM05D007657 ORTHO05D009471 1.6e-27 127.9 123 54.5
Rhsim04G0057500 Rhododendron simsii HOM05D007657 ORTHO05D009471 1.6e-27 127.9 122 57.4
arahy.Tifrunner.gnm1.ann1.X70W6B Arachis hypogaea HOM05D007657 ORTHO05D009471 2.7e-27 127.1 123 56.1
Cc05_g05320 Coffea canephora HOM05D007657 ORTHO05D009471 2.7e-27 127.1 146 49.3
Glyma.12G196900 Glycine max HOM05D007657 ORTHO05D009471 2.7e-27 127.1 125 55.2
Psat0s3329g0040 Pisum sativum HOM05D007657 ORTHO05D009471 2.7e-27 127.1 125 54.4
Thecc.02G164200 Theobroma cacao HOM05D007657 ORTHO05D009471 2.7e-27 127.1 123 56.1
Phvul.005G112100 Phaseolus vulgaris HOM05D007657 ORTHO05D009471 3.5e-27 126.7 137 49.6
QL08p034229 Quercus lobata HOM05D007657 ORTHO05D009471 6.0e-27 125.9 349 33.0
Gohir.A03G163000 Gossypium hirsutum HOM05D007657 ORTHO05D009471 1.0e-26 125.2 305 35.4
Lj3g0008282 Lotus japonicus HOM05D007657 ORTHO05D009471 1.0e-26 125.2 124 54.0
FAN09G3022 Fragaria x ananassa HOM05D007657 ORTHO05D009471 2.3e-26 124.0 120 54.2
Medtr2g089070 Medicago truncatula HOM05D007657 ORTHO05D009471 6.6e-26 122.5 128 50.8
CAN.G86.24 Capsicum annuum HOM05D007657 ORTHO05D009471 1.1e-25 121.7 135 52.6
FAN02G3547 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.5e-25 121.3 120 53.3
TPR.G30798 Trifolium pratense HOM05D007657 ORTHO05D009471 1.9e-25 120.9 123 56.1
Nn1g03743 Nelumbo nucifera HOM05D020747 ORTHO05D009471 3.3e-25 120.2 125 54.4
HPP92_000868 Vanilla planifolia HOM05D007657 ORTHO05D009471 4.3e-25 119.8 123 51.2
Duzib248G0741 Durio zibethinus HOM05D007657 ORTHO05D009471 5.6e-25 119.4 124 52.4
Cfa014460 Carpinus fangiana HOM05D007657 ORTHO05D009471 7.3e-25 119.0 365 34.2
MD17G1091100 Malus domestica HOM05D007657 ORTHO05D009471 1.2e-24 118.2 123 49.6
COL.COLO4_13025 Corchorus olitorius HOM05D007657 ORTHO05D009471 1.6e-24 117.9 309 36.9
Cpa.g.sc8.253 Carica papaya HOM05D007657 ORTHO05D009471 2.1e-24 117.5 330 33.0
Nitab4.5_0003429g0020 Nicotiana tabacum HOM05D007657 ORTHO05D009471 2.1e-24 117.5 145 50.3
PGSC0003DMG400026164 Solanum tuberosum HOM05D007657 ORTHO05D009471 2.8e-24 117.1 150 47.3
FAN05G3329 Fragaria x ananassa HOM05D007657 ORTHO05D009471 3.6e-24 116.7 120 53.3
Lsat_1_v5_gn_3_43060 Lactuca sativa HOM05D007657 ORTHO05D009471 3.6e-24 116.7 118 55.1
HanXRQChr15g0479591 Helianthus annuus HOM05D007657 ORTHO05D009471 6.2e-24 115.9 124 50.8
TWI18G0648 Tripterygium wilfordii HOM05D007657 ORTHO05D009471 6.2e-24 115.9 123 52.8
FAN14G5828 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.1e-23 115.2 121 52.9
MBI18_g21102_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.1e-23 115.2 123 52.8
MBI18_g45174_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.1e-23 115.2 123 52.8
FvH4_6g43750 Fragaria vesca HOM05D007657 ORTHO05D009471 1.4e-23 114.8 121 52.9
Sopen07g026480 Solanum pennellii HOM05D007657 ORTHO05D009471 2.4e-23 114.0 150 46.7
Solyc07g052930.3 Solanum lycopersicum HOM05D007657 ORTHO05D009471 3.1e-23 113.6 150 46.7
Hma1.2p1_2477F.1_g322870 Hydrangea macrophylla HOM05D007657 ORTHO05D009471 5.2e-23 112.8 118 50.8
Atru.chr6.3119 Acer truncatum HOM05D007657 ORTHO05D009471 1.5e-22 111.3 123 53.7
Lalb_Chr14g0375601 Lupinus albus HOM05D007657 ORTHO05D009471 1.5e-22 111.3 120 52.5
Peaxi162Scf00007g01411 Petunia axillaris HOM05D007657 ORTHO05D009471 2.9e-21 107.1 128 48.4
MBI18_g21101_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 4.9e-21 106.3 123 51.2
SalBow1G6397 Salvia bowleyana HOM05D007657 ORTHO05D009471 6.4e-21 105.9 125 50.4
RcHm_v2.0_Chr2g0160481 Rosa chinensis HOM05D007657 ORTHO05D009471 1.1e-20 105.1 122 51.6
Aa31LG8G8650 Aethionema arabicum HOM05D007657 ORTHO05D009471 3.2e-20 103.6 120 47.5
ATR0804G080 Amborella trichopoda HOM05D007657 ORTHO05D009471 3.5e-19 100.1 112 47.3
Aqoxy7G03995 Aquilegia oxysepala HOM05D007657 ORTHO05D009471 3.9e-18 96.7 122 46.7
THA.LOC104802534 Tarenaya hassleriana HOM05D007657 ORTHO05D009471 3.9e-18 96.7 112 47.3
SGA_v2.0_scaffold159G37602 Striga asiatica HOM05D007657 ORTHO05D009471 5.1e-18 96.3 125 44.8
Sc12g0002470 Simmondsia chinensis HOM05D007657 ORTHO05D009471 6.6e-18 95.9 113 48.7
unitig_62.g23194 Utricularia gibba HOM05D007657 ORTHO05D009471 2.5e-17 94.0 139 42.4
Actinidia30501 Actinidia chinensis HOM05D007657 ORTHO05D009471 4.3e-17 93.2 88 59.1
Thhalv10021235m.g Eutrema salsugineum HOM05D007657 ORTHO05D009471 4.3e-17 93.2 114 45.6
Nn012s41456 Nelumbo nucifera HOM05D020747 ORTHO05D009471 4.3e-17 93.2 103 51.5
Nn1g02822 Nelumbo nucifera HOM05D020747 ORTHO05D009471 4.3e-17 93.2 103 51.5
Sp3g19920 Schrenkiella parvula HOM05D007657 ORTHO05D009471 2.1e-16 90.9 112 46.4
AT3G22100 Arabidopsis thaliana HOM05D007657 ORTHO05D009471 4.7e-16 89.7 112 44.6
BcaB06g26306 Brassica carinata HOM05D007657 ORTHO05D009471 4.7e-16 89.7 110 44.5
CDE05G1372 Ceratophyllum demersum HOM05D007657 ORTHO05D009471 3.1e-15 87.0 118 41.5
Psat7g073040 Pisum sativum HOM05D007657 ORTHO05D009471 3.1e-15 87.0 94 50.0
SGA_v2.0_scaffold4400G54479 Striga asiatica HOM05D007657 ORTHO05D009471 3.1e-15 87.0 117 44.4
BcaC05g28104 Brassica carinata HOM05D007657 ORTHO05D009471 4.0e-15 86.7 110 43.6
C05p41310 Brassica napus HOM05D007657 ORTHO05D009471 4.0e-15 86.7 110 43.6
BolC5t32872H Brassica oleracea HOM05D007657 ORTHO05D009471 4.0e-15 86.7 110 43.6
AL3G36280 Arabidopsis lyrata HOM05D007657 ORTHO05D009471 5.3e-15 86.3 112 42.9
Carub.0003s2227 Capsella rubella HOM05D007657 ORTHO05D009471 1.2e-14 85.1 121 43.0
A05p26740 Brassica napus HOM05D007657 ORTHO05D009471 2.0e-14 84.3 110 42.7
BcaB04g20544 Brassica carinata HOM05D007657 ORTHO05D009471 3.4e-14 83.6 111 42.3
BraA05t21556Z Brassica rapa HOM05D007657 ORTHO05D009471 5.8e-14 82.8 110 41.8
Nitab4.5_0001134g0150 Nicotiana tabacum HOM05D007657 ORTHO05D009471 9.9e-14 82.0 124 43.5
Cfa019641 Carpinus fangiana HOM05D007657 ORTHO05D009471 1.7e-13 81.3 110 40.9
Psat7g073080 Pisum sativum HOM05D007657 ORTHO05D009471 2.2e-13 80.9 91 49.5
Cfa021139 Carpinus fangiana HOM05D007657 ORTHO05D009471 2.9e-13 80.5 110 39.1
FAN19G0836 Fragaria x ananassa HOM05D007657 ORTHO05D009471 4.9e-13 79.7 64 59.4
FvH4_1g29760 Fragaria vesca HOM05D007657 ORTHO05D009471 4.2e-12 76.6 64 59.4
PGR042G0132 Punica granatum HOM05D007657 ORTHO05D009471 7.1e-12 75.9 135 38.5
SEGI_06547 Sequoiadendron giganteum HOM05D000850 ORTHO05D000266 5.1e-10 69.7 126 39.7
SEGI_38761 Sequoiadendron giganteum HOM05D000850 ORTHO05D000266 5.1e-10 69.7 126 39.7
SEGI_02134 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 1.5e-09 68.2 161 33.5
SEGI_09905 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 1.5e-09 68.2 121 37.2
SEGI_10364 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 1.5e-09 68.2 114 39.5
SEGI_20243 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 1.5e-09 68.2 114 39.5
Migut.H01205 Erythranthe guttata HOM05D007657 ORTHO05D009471 5.6e-09 66.2 90 45.6
ATR0772G185 Amborella trichopoda HOM05D007657 ORTHO05D009471 6.2e-08 62.8 84 40.5
COL.COLO4_22896 Corchorus olitorius HOM05D003734 ORTHO05D004270 2.4e-07 60.8 109 41.3
Lsat_1_v5_gn_1_33401 Lactuca sativa HOM05D003734 ORTHO05D004270 4.0e-07 60.1 108 38.0
Nitab4.5_0000623g0010 Nicotiana tabacum HOM05D003734 ORTHO05D004270 4.0e-07 60.1 118 39.0
Pp3c16_21590 Physcomitrium patens HOM05D000850 ORTHO05D000266 4.0e-07 60.1 121 34.7
CDE07G1862 Ceratophyllum demersum HOM05D003734 ORTHO05D004270 6.9e-07 59.3 119 33.6
AL7G21100 Arabidopsis lyrata HOM05D001048 ORTHO05D000069 9.0e-07 58.9 138 31.9
Migut.M01923 Erythranthe guttata HOM05D003734 ORTHO05D004270 9.0e-07 58.9 108 35.2
PGR004G2748 Punica granatum HOM05D003734 ORTHO05D004270 9.0e-07 58.9 110 40.9
PGR038G0002 Punica granatum HOM05D003734 ORTHO05D004270 9.0e-07 58.9 110 40.9
SGA_v2.0_scaffold1G00292 Striga asiatica HOM05D003734 ORTHO05D004270 1.2e-06 58.5 109 35.8
DCAR_001361 Daucus carota HOM05D000850 ORTHO05D000266 1.5e-06 58.2 61 49.2
PSO675G3350 Papaver somniferum HOM05D003734 ORTHO05D004270 1.5e-06 58.2 111 35.1
AagrBONN_evm.TU.Sc2ySwM_344.2177 Anthoceros agrestis HOM05D000850 ORTHO05D000266 2.0e-06 57.8 127 33.9
Thecc.06G011000 Theobroma cacao HOM05D003734 ORTHO05D004270 2.0e-06 57.8 108 38.9
BraA01t00671Z Brassica rapa HOM05D001048 ORTHO05D000069 2.6e-06 57.4 134 32.1
FAN16G0318 Fragaria x ananassa HOM05D003734 ORTHO05D004270 2.6e-06 57.4 111 39.6
PGR083G1880 Punica granatum HOM05D003734 ORTHO05D004270 2.6e-06 57.4 108 35.2
SEGI_21902 Sequoiadendron giganteum HOM05D000850 ORTHO05D000266 2.6e-06 57.4 98 37.8
AT4G30980 Arabidopsis thaliana HOM05D001048 ORTHO05D000069 3.4e-06 57.0 125 32.0
FAN25G3016 Fragaria x ananassa HOM05D003734 ORTHO05D004270 3.4e-06 57.0 111 38.7
Nitab4.5_0008763g0020 Nicotiana tabacum HOM05D003734 ORTHO05D004270 3.4e-06 57.0 118 37.3
Pp3c25_13740 Physcomitrium patens HOM05D000850 ORTHO05D000266 3.4e-06 57.0 120 35.8
PGSC0003DMG400020812 Solanum tuberosum HOM05D003734 ORTHO05D004270 3.4e-06 57.0 117 37.6
ECA246G5068 Erigeron canadensis HOM05D007657 ORTHO05D009471 4.5e-06 56.6 80 46.2
MD10G1243500 Malus domestica HOM05D003734 ORTHO05D004270 4.5e-06 56.6 118 36.4
Thecc.07G180300 Theobroma cacao HOM05D003734 ORTHO05D004270 5.8e-06 56.2 108 37.0
CDE06G0170 Ceratophyllum demersum HOM05D003734 ORTHO05D004270 7.6e-06 55.8 117 31.6
Duzib213G0851 Durio zibethinus HOM05D003734 ORTHO05D004270 7.6e-06 55.8 108 35.2
MD05G1265500 Malus domestica HOM05D003734 ORTHO05D004270 7.6e-06 55.8 118 37.3
Carub.0007s0956 Capsella rubella HOM05D001048 ORTHO05D000069 9.9e-06 55.5 139 31.7
Lalb_Chr23g0267041 Lupinus albus HOM05D000850 ORTHO05D000266 9.9e-06 55.5 60 48.3
Sed0009850 Sechium edule HOM05D000850 ORTHO05D000266 9.9e-06 55.5 47 57.4
SEGI_20902 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 9.9e-06 55.5 66 47.0
TAR626G1440 Trochodendron aralioides HOM05D003734 ORTHO05D004270 9.9e-06 55.5 117 35.9
HPP92_017482 Vanilla planifolia HOM05D001048 ORTHO05D000069 9.9e-06 55.5 131 30.5


User provided reference genes

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