Gene: AT3G22100
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G22100
- Transcript Identifier AT3G22100.1
- Gene Type Coding gene
- Location Chr3 : 7783711-7784469 : negative
Gene Family Information
- ID HOM05D007657
- #Genes/#Species 95/70
- Phylogenetic origin
- ID ORTHO05D009471
- #Genes/#Species 101/71
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G22100.1
- uniprot Q9LRJ4
Descriptions
- Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
- Computational description basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); Has 284 Blast hits to 284 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 282; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | Gene Ontology | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 2 |
| GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 2 |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |