Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 2625.1 1320 100.0
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1905.6 1325 73.1
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1893.2 1330 70.5
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1892.5 1323 72.1
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1889.4 1328 71.2
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1887.8 1327 71.1
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1886.3 1326 72.0
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1885.5 1328 70.9
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1883.2 1328 70.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1882.8 1327 70.8
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1877.8 1328 71.5
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1876.3 1328 70.9
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1875.5 1326 71.4
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1869.0 1327 70.6
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1869.0 1327 70.6
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1867.8 1330 71.6
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1859.7 1327 70.6
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1852.4 1323 71.4
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1850.5 1330 71.1
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1848.2 1328 70.9
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1829.3 1329 69.4
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1822.8 1331 69.0
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1822.0 1328 69.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1804.6 1332 68.0
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1780.8 1324 67.4
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1776.9 1333 68.0
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1776.5 1246 71.0
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1771.1 1247 71.9
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1760.0 1328 66.5
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1758.4 1324 67.1
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1758.0 1245 72.0
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1751.5 1323 65.6
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1749.9 1325 66.6
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1748.0 1327 65.2
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1726.5 1331 65.7
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1723.8 1279 67.8
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1720.7 1331 65.5
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1717.2 1327 65.9
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1713.7 1326 66.1
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1705.3 1326 65.2
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1698.7 1323 64.7
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1694.1 1320 64.8
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1690.6 1320 64.3
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1690.6 1330 65.5
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1688.7 1321 64.3
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1684.5 1278 66.4
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1682.2 1322 64.1
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1672.9 1340 62.9
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1671.8 1276 67.0
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1671.8 1321 64.0
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1668.7 1345 62.7
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1667.5 1327 63.4
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1667.1 1324 63.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1664.8 1341 64.5
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1656.0 1331 62.8
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1645.6 1330 62.3
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1644.4 1321 64.7
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1643.6 1324 63.0
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1642.9 1338 61.7
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1633.2 1340 61.9
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1628.6 1333 62.0
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1620.5 1238 65.3
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1614.0 1333 61.7
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1607.0 1344 61.6
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1604.7 1327 61.9
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1264 63.8
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1601.3 1327 61.8
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1600.9 1327 61.6
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1599.3 1327 61.4
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1594.3 1330 61.4
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1593.2 1095 73.3
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1585.5 1329 60.8
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1585.1 1330 61.7
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1584.3 1329 60.8
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1583.9 1327 61.4
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1568.1 1320 60.6
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1563.9 1356 58.8
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1552.3 1100 70.5
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1547.7 1321 60.3
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1544.3 1326 60.6
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1538.5 1282 63.8
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1194 64.3
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1520.0 1327 59.5
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1517.7 1328 59.6
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1506.1 1324 59.7
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1486.9 1129 66.0
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1471.8 1112 65.9
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1449.9 1092 66.0
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1419.8 1552 50.8
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1410.2 1343 55.0
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1408.3 1147 62.6
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1393.3 1324 57.4
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1383.2 1329 54.5
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1347.4 1332 53.9
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1334.7 1350 54.2
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1284.6 946 67.7
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1243.8 902 67.7
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1179.1 1327 50.9
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1157.9 864 68.3
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1138.6 1258 49.7
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.1e-310 1068.9 756 72.0
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.2e-250 870.9 1381 38.5
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 4.4e-232 809.3 857 49.4
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 6.8e-225 785.4 1186 39.8
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 2.0e-224 783.9 1311 37.1
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.7e-223 780.8 1153 39.3
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.2e-210 738.0 771 53.3
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.8e-153 548.1 1498 30.2
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 7.9e-141 506.1 377 64.7
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 8.8e-140 502.7 358 72.3
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 8.8e-132 476.1 458 57.0
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 1.4e-92 345.9 1357 26.7
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 3.4e-91 341.3 314 56.7
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 5.0e-87 327.4 1546 25.0
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 2.9e-82 311.6 255 58.8
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 5.4e-81 307.4 302 54.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.8e-66 258.1 196 70.4
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 6.0e-64 250.8 1339 23.9
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 6.4e-58 230.7 203 57.1
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.1e-54 219.9 225 52.0
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.8e-51 207.6 167 67.1
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 4.9e-42 177.9 1359 23.8
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 2.3e-39 169.1 129 69.8
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 3.7e-37 161.8 120 71.7
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 6.9e-36 157.5 288 39.9
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 2.9e-26 125.6 122 54.1


User provided reference genes

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