Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2998 Cannabis sativa HOM05D004625 ORTHO05D006054 4.1e-102 374.8 198 100.0
CANSAT25G0492 Cannabis sativa HOM05D004625 ORTHO05D006054 4.4e-96 354.8 198 95.5
CANSAT21G0857 Cannabis sativa HOM05D004625 ORTHO05D006054 2.9e-79 298.9 162 96.9
Cfa004948 Carpinus fangiana HOM05D004625 ORTHO05D006054 8.2e-58 227.6 194 65.5
RcHm_v2.0_Chr6g0260791 Rosa chinensis HOM05D004625 ORTHO05D006054 7.6e-56 221.1 175 69.7
FvH4_2g07370 Fragaria vesca HOM05D004625 ORTHO05D006054 1.3e-55 220.3 176 69.3
FAN20G2900 Fragaria x ananassa HOM05D004625 ORTHO05D006054 3.8e-55 218.8 176 68.8
FAN24G2498 Fragaria x ananassa HOM05D004625 ORTHO05D006054 3.8e-55 218.8 176 68.8
FAN27G0869 Fragaria x ananassa HOM05D004625 ORTHO05D006054 5.0e-55 218.4 176 68.8
Thecc.02G028700 Theobroma cacao HOM05D004625 ORTHO05D006054 8.4e-55 217.6 176 67.6
FAN15G2126 Fragaria x ananassa HOM05D004625 ORTHO05D006054 1.1e-54 217.2 176 68.2
Manes.15G145800 Manihot esculenta HOM05D004625 ORTHO05D006054 1.4e-54 216.9 194 59.8
QL11p039255 Quercus lobata HOM05D004625 ORTHO05D006054 1.4e-54 216.9 194 61.9
MD10G1086500 Malus domestica HOM05D004625 ORTHO05D006054 2.5e-54 216.1 176 68.8
Gohir.D01G172900 Gossypium hirsutum HOM05D004625 ORTHO05D006054 3.2e-54 215.7 176 65.3
Gorai.002G214500 Gossypium raimondii HOM05D004625 ORTHO05D006054 3.2e-54 215.7 176 65.3
Gohir.A01G181800 Gossypium hirsutum HOM05D004625 ORTHO05D006054 5.5e-54 214.9 176 65.9
Prupe.8G112500 Prunus persica HOM05D004625 ORTHO05D006054 5.5e-54 214.9 194 63.4
CiPaw.05G058800 Carya illinoinensis HOM05D004625 ORTHO05D006054 4.6e-53 211.8 196 62.2
COL.COLO4_17776 Corchorus olitorius HOM05D004625 ORTHO05D006054 6.1e-53 211.5 173 65.9
Ciclev10027657m.g Citrus clementina HOM05D004625 ORTHO05D006054 1.3e-52 210.3 178 65.2
RcHm_v2.0_Chr6g0260701 Rosa chinensis HOM05D004625 ORTHO05D006054 8.7e-52 207.6 175 65.7
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 8.7e-52 207.6 176 63.6
Potri.004G147800 Populus trichocarpa HOM05D004625 ORTHO05D006054 1.1e-51 207.2 176 64.2
Rhsim05G0078500 Rhododendron simsii HOM05D004625 ORTHO05D006054 1.1e-51 207.2 202 56.9
Duzib052G1066 Durio zibethinus HOM05D004625 ORTHO05D006054 1.5e-51 206.8 177 63.3
CsaV3_2G014290 Cucumis sativus L. HOM05D004625 ORTHO05D006054 2.5e-51 206.1 196 58.2
Atru.chr5.2894 Acer truncatum HOM05D004625 ORTHO05D006054 9.7e-51 204.1 178 65.2
GSVIVG01031879001 Vitis vinifera HOM05D004625 ORTHO05D006054 1.3e-50 203.8 176 62.5
MELO3C021931.2 Cucumis melo HOM05D004625 ORTHO05D006054 1.6e-50 203.4 199 57.3
ClCG09G017690 Citrullus lanatus HOM05D004625 ORTHO05D006054 2.2e-50 203.0 204 57.4
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 2.8e-50 202.6 204 57.8
Lalb_Chr19g0138511 Lupinus albus HOM05D004625 ORTHO05D006054 8.2e-50 201.1 178 63.5
arahy.Tifrunner.gnm1.ann1.5EIT1K Arachis hypogaea HOM05D004625 ORTHO05D006054 1.1e-49 200.7 177 64.4
Sed0024635 Sechium edule HOM05D004625 ORTHO05D006054 3.1e-49 199.1 202 56.4
Hma1.2p1_1353F.1_g277680 Hydrangea macrophylla HOM05D004625 ORTHO05D006054 1.5e-48 196.8 189 59.3
TAR381G1538 Trochodendron aralioides HOM05D004625 ORTHO05D006054 2.0e-48 196.4 202 55.9
vmacro19476 Vaccinium macrocarpon HOM05D004625 ORTHO05D006054 2.6e-48 196.1 202 54.5
Ca_20818_v3 Cicer arietinum L. HOM05D004625 ORTHO05D006054 7.7e-48 194.5 177 61.6
Lj3g0006928 Lotus japonicus HOM05D004625 ORTHO05D006054 1.3e-47 193.7 177 61.6
Cpa.g.sc62.84 Carica papaya HOM05D004625 ORTHO05D006054 1.7e-47 193.4 170 60.6
TPR.G10228 Trifolium pratense HOM05D004625 ORTHO05D006054 1.7e-47 193.4 192 56.8
Medtr4g068580 Medicago truncatula HOM05D004625 ORTHO05D006054 2.9e-47 192.6 177 61.0
Phvul.011G050300 Phaseolus vulgaris HOM05D004625 ORTHO05D006054 5.0e-47 191.8 177 61.0
TWI75G0995 Tripterygium wilfordii HOM05D004625 ORTHO05D006054 8.5e-47 191.0 175 61.1
Actinidia27924 Actinidia chinensis HOM05D004625 ORTHO05D006054 1.4e-46 190.3 176 58.5
Glyma.11G123500 Glycine max HOM05D004625 ORTHO05D006054 2.5e-46 189.5 176 60.8
Nn5g29411 Nelumbo nucifera HOM05D004625 ORTHO05D006054 9.4e-46 187.6 176 58.5
Psat7g207400 Pisum sativum HOM05D004625 ORTHO05D006054 3.6e-45 185.7 178 60.1
Lsat_1_v5_gn_9_109140 Lactuca sativa HOM05D004625 ORTHO05D006054 1.4e-44 183.7 198 52.0
Lj5A204T93 Lonicera japonica HOM05D004625 ORTHO05D006054 2.0e-43 179.9 202 55.0
PSO541G5018 Papaver somniferum HOM05D004625 ORTHO05D006054 2.5e-43 179.5 176 57.4
HanXRQChr03g0074341 Helianthus annuus HOM05D004625 ORTHO05D006054 9.7e-43 177.6 192 50.5
Eucgr.I01219 Eucalyptus grandis HOM05D004625 ORTHO05D006054 1.7e-42 176.8 192 51.0
PGR142G2954 Punica granatum HOM05D004625 ORTHO05D006054 2.8e-42 176.0 182 55.5
SalBow6G1518 Salvia bowleyana HOM05D004625 ORTHO05D006054 4.8e-42 175.3 176 52.3
DCAR_003629 Daucus carota HOM05D004625 ORTHO05D006054 2.4e-41 172.9 169 55.0
ECA240G0059 Erigeron canadensis HOM05D004625 ORTHO05D006054 4.1e-41 172.2 196 49.5
Aqoxy6G00945 Aquilegia oxysepala HOM05D004625 ORTHO05D006054 5.3e-41 171.8 170 57.1
CARHR106270 Cardamine hirsuta HOM05D004625 ORTHO05D006054 7.7e-40 167.9 175 52.0
SGA_v2.0_scaffold58G20593 Striga asiatica HOM05D004625 ORTHO05D006054 1.3e-39 167.2 176 51.7
Cc02_g18180 Coffea canephora HOM05D004625 ORTHO05D006054 2.2e-39 166.4 175 52.0
Migut.B00290 Erythranthe guttata HOM05D004625 ORTHO05D006054 2.9e-39 166.0 201 48.3
AL3G47770 Arabidopsis lyrata HOM05D004625 ORTHO05D006054 5.0e-39 165.2 175 52.6
MBI16_g13376_MAGBIO Magnolia biondii HOM05D004625 ORTHO05D006054 6.5e-39 164.9 186 51.6
Peaxi162Scf00016g01337 Petunia axillaris HOM05D004625 ORTHO05D006054 8.5e-39 164.5 176 51.7
EL10Ac9g21791 Beta vulgaris HOM05D004625 ORTHO05D006054 1.4e-36 157.1 184 52.2
AUR62016661 Chenopodium quinoa HOM05D004625 ORTHO05D006054 1.4e-36 157.1 170 54.1
AUR62011397 Chenopodium quinoa HOM05D004625 ORTHO05D006054 1.8e-36 156.8 170 54.1
Sc14g0001720 Simmondsia chinensis HOM05D004625 ORTHO05D006054 3.9e-36 155.6 183 49.7
Hund06206 Selenicereus undatus HOM05D004625 ORTHO05D006054 6.7e-36 154.8 179 53.6
Aa31LG8G13470 Aethionema arabicum HOM05D004625 ORTHO05D006054 1.1e-35 154.1 177 50.8
Ah.01g019860 Amaranthus hybridus HOM05D004625 ORTHO05D006054 2.0e-35 153.3 176 50.0
THA.LOC104807342 Tarenaya hassleriana HOM05D004625 ORTHO05D006054 2.0e-32 143.3 175 48.6
CDE02G1698 Ceratophyllum demersum HOM05D004625 ORTHO05D006054 2.2e-31 139.8 176 48.3
ATR0733G016 Amborella trichopoda HOM05D004625 ORTHO05D006054 2.7e-29 132.9 181 45.3
GSVIVG01000374001 Vitis vinifera HOM05D004625 ORTHO05D006054 1.3e-26 124.0 111 59.5
HPP92_012816 Vanilla planifolia HOM05D004625 ORTHO05D006054 1.1e-25 120.9 179 41.3
Zm00001eb056540 Zea mays HOM05D004625 ORTHO05D006054 5.5e-22 108.6 171 40.4
RcHm_v2.0_Chr6g0260221 Rosa chinensis HOM05D004625 ORTHO05D006054 1.6e-21 107.1 78 74.4
Thhalv10022517m.g Eutrema salsugineum HOM05D004625 ORTHO05D006054 2.3e-20 103.2 88 59.1
Sp3g29240 Schrenkiella parvula HOM05D004625 ORTHO05D006054 1.2e-19 100.9 85 61.2
A07p04860 Brassica napus HOM05D004625 ORTHO05D006054 1.5e-19 100.5 88 59.1
BraA07t28278Z Brassica rapa HOM05D004625 ORTHO05D006054 1.5e-19 100.5 88 59.1
SEGI_40710 Sequoiadendron giganteum HOM05D004625 ORTHO05D006054 1.7e-18 97.1 178 39.3
BcaC06g36102 Brassica carinata HOM05D004625 ORTHO05D006054 2.4e-17 93.2 88 55.7
C07p07830 Brassica napus HOM05D004625 ORTHO05D006054 2.4e-17 93.2 88 55.7
BolC7t41201H Brassica oleracea HOM05D004625 ORTHO05D006054 2.4e-17 93.2 88 55.7
Nitab4.5_0009399g0010 Nicotiana tabacum HOM05D004625 ORTHO05D006054 1.0e-15 87.8 171 33.3
RcHm_v2.0_Chr6g0259991 Rosa chinensis HOM05D004625 ORTHO05D006054 4.2e-14 82.4 54 77.8
Mapoly0101s0045 Marchantia polymorpha HOM05D004625 ORTHO05D006054 9.4e-14 81.3 203 33.5
Solyc01g109080.3 Solanum lycopersicum HOM05D004625 ORTHO05D006054 6.1e-13 78.6 176 32.4
Sopen01g051280 Solanum pennellii HOM05D004625 ORTHO05D006054 6.1e-13 78.6 176 32.4
AagrBONN_evm.TU.Sc2ySwM_362.351 Anthoceros agrestis HOM05D004625 ORTHO05D006054 3.4e-11 72.8 181 35.9
Nitab4.5_0004946g0030 Nicotiana tabacum HOM05D004625 ORTHO05D006054 1.6e-08 63.9 170 28.2
unitig_0.g75 Utricularia gibba HOM05D004625 ORTHO05D006054 9.5e-06 54.7 110 31.8


User provided reference genes

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