Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 7.2e-153 544.3 360 100.0
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 4.4e-86 322.4 361 55.1
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 1.9e-84 317.0 361 54.3
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 3.3e-81 306.2 361 53.5
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.9e-76 290.4 362 50.8
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.9e-76 290.4 362 52.2
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 7.1e-76 288.5 361 49.0
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.2e-75 287.7 362 51.9
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 6.0e-75 285.4 361 51.5
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.7e-74 283.9 360 49.4
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 2.3e-74 283.5 382 47.6
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 5.1e-74 282.3 360 50.0
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 6.6e-74 282.0 361 49.9
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.3e-73 279.6 362 51.1
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 9.6e-73 278.1 362 49.7
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 3.6e-72 276.2 374 48.7
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 3.1e-71 273.1 369 48.5
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.3e-69 267.7 405 45.7
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 1.4e-68 264.2 403 44.9
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 3.2e-68 263.1 363 47.1
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 5.4e-68 262.3 369 47.2
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.6e-67 260.8 363 47.4
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.6e-67 260.8 363 47.7
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 1.6e-67 260.8 362 46.4
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 3.5e-67 259.6 360 46.1
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 4.6e-67 259.2 361 47.4
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 7.9e-67 258.5 331 49.2
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.3e-66 257.7 366 47.0
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.3e-66 256.9 361 46.5
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 2.3e-66 256.9 361 46.5
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 3.0e-66 256.5 371 47.4
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 3.0e-66 256.5 354 45.8
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.1e-66 255.8 362 47.8
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 6.6e-66 255.4 363 45.5
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 8.7e-66 255.0 361 46.5
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.5e-65 254.2 354 46.0
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.9e-65 253.8 370 45.7
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 1.9e-65 253.8 362 45.0
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 2.5e-65 253.4 366 46.2
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 4.3e-65 252.7 370 45.7
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 2.1e-64 250.4 362 44.2
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 2.1e-64 250.4 358 45.0
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 2.8e-64 250.0 363 44.4
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 4.8e-64 249.2 358 43.9
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 8.1e-64 248.4 332 47.6
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 1.8e-63 247.3 364 46.2
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 2.4e-63 246.9 371 45.0
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 9.0e-63 245.0 355 45.9
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 2.0e-62 243.8 392 42.9
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 7.6e-62 241.9 358 47.5
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.3e-61 241.1 362 46.1
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.7e-61 240.7 364 45.3
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.7e-61 240.7 362 45.3
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 3.8e-61 239.6 360 44.7
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 9.3e-60 235.0 361 44.6
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 1.2e-59 234.6 360 44.7
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 1.2e-59 234.6 363 43.5
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 3.5e-59 233.0 363 41.6
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.1e-57 228.0 361 43.8
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 2.1e-56 223.8 388 40.7
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 8.1e-56 221.9 404 39.9
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.3e-55 219.2 317 48.6
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 3.4e-54 216.5 362 41.4
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 7.6e-54 215.3 359 41.5
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 2.2e-53 213.8 365 40.8
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 2.9e-53 213.4 410 39.0
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 7.1e-52 208.8 306 44.1
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 1.0e-50 204.9 361 41.0
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.9e-50 203.0 315 46.3
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 5.7e-49 199.1 355 40.3
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 7.4e-49 198.7 382 37.7
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 8.2e-48 195.3 353 40.5
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 1.2e-46 191.4 148 72.3
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.2e-46 191.4 153 73.2
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.5e-46 191.0 373 38.6
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 4.5e-46 189.5 358 39.9
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.9e-46 189.1 321 40.8
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 1.0e-45 188.3 413 35.1
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 6.5e-45 185.7 305 40.3
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 7.2e-44 182.2 366 38.5
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.2e-43 181.4 294 45.2
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 3.5e-43 179.9 333 40.2
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.8e-42 177.6 307 44.3
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.9e-41 174.1 403 40.2
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.3e-41 173.3 151 69.5
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 5.7e-41 172.6 334 36.8
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 6.3e-40 169.1 366 36.9
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.8e-39 167.5 158 63.3
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 2.4e-39 167.2 383 34.2
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 3.1e-39 166.8 330 37.3
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 3.1e-39 166.8 330 37.3
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 3.1e-39 166.8 324 36.1
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 5.3e-39 166.0 292 40.8
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 9.0e-39 165.2 293 41.6
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 4.5e-38 162.9 364 36.0
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 6.5e-37 159.1 329 37.7
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 6.5e-37 159.1 329 37.7
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 1.1e-36 158.3 369 35.0
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 9.4e-36 155.2 333 34.8
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.1e-35 154.1 408 43.4
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 1.0e-34 151.8 260 39.6
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 9.7e-33 145.2 410 37.1
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 4.8e-32 142.9 152 53.3
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 8.2e-32 142.1 412 36.7
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 1.2e-30 138.3 153 54.9
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 5.5e-28 129.4 232 38.8
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.1e-27 127.5 135 53.3
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 6.1e-27 125.9 131 54.2
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 1.0e-26 125.2 103 70.9
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.8e-26 124.4 110 67.3
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.8e-26 124.4 110 67.3
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 6.7e-26 122.5 311 33.8
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 2.0e-25 120.9 132 56.1
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 2.2e-24 117.5 288 38.9
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 8.2e-24 115.5 282 41.8
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 4.5e-22 109.8 128 53.1
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.2e-21 107.5 136 51.5
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 3.8e-21 106.7 260 33.8
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 4.2e-20 103.2 364 29.1
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 5.2e-18 96.3 65 67.7
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 2.0e-17 94.4 63 68.3
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 4.4e-17 93.2 135 43.0
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.2e-16 89.0 67 62.7
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 3.5e-14 83.6 119 42.0
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 1.0e-13 82.0 135 40.0
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.2e-08 64.3 59 59.3
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.2e-08 64.3 59 59.3
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 4.1e-07 60.1 36 83.3
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 5.4e-07 59.7 129 36.4
VMungo0647G0061 Vigna mungo HOM05D026408 ORTHO05D029776 7.0e-07 59.3 128 35.2


User provided reference genes

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