Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 1.3e-274 949.1 479 100.0
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 1.1e-153 547.4 503 60.0
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 2.1e-152 543.1 476 60.9
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 4.9e-149 531.9 472 58.9
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 6.6e-146 521.5 475 58.9
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 3.6e-144 515.8 477 57.7
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 6.2e-144 515.0 466 58.8
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.4e-143 513.8 474 58.4
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 5.2e-143 511.9 470 58.7
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.9e-140 503.4 466 58.8
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.7e-138 496.9 482 56.8
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 8.1e-136 488.0 465 56.6
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 1.1e-135 487.6 476 56.9
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 1.2e-134 484.2 475 56.8
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 2.6e-134 483.0 454 58.1
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 4.9e-133 478.8 477 54.9
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.1e-132 477.6 489 54.0
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 4.2e-132 475.7 466 56.4
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 1.2e-131 474.2 491 54.2
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 5.1e-130 468.8 467 57.6
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.5e-129 467.2 472 54.2
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 1.1e-127 461.1 477 53.7
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.4e-124 450.7 467 53.3
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 7.1e-124 448.4 472 53.0
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 2.3e-122 443.4 467 51.8
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 5.6e-121 438.7 459 51.0
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 2.1e-120 436.8 469 53.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 2.4e-119 433.3 459 50.8
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 2.9e-117 426.4 477 49.5
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.9e-117 426.4 480 51.5
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 6.5e-117 425.2 466 49.6
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 4.2e-116 422.5 467 49.5
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 4.2e-116 422.5 459 49.7
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 4.2e-116 422.5 433 51.5
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 2.1e-115 420.2 467 49.3
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 3.5e-115 419.5 448 49.6
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.8e-114 417.2 480 50.2
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.8e-114 417.2 466 50.2
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 2.3e-114 416.8 466 48.9
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 2.3e-114 416.8 473 49.3
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 3.0e-114 416.4 468 49.1
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 5.1e-114 415.6 337 63.2
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 6.7e-114 415.2 357 63.3
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 6.7e-114 415.2 484 50.6
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 4.8e-112 409.1 482 48.8
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 6.9e-111 405.2 462 47.8
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.0e-109 401.4 465 48.2
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 1.0e-109 401.4 342 60.5
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 6.1e-107 392.1 485 47.4
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.0e-106 391.3 376 56.6
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.3e-106 390.2 335 59.7
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 5.1e-106 389.0 488 48.0
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 8.7e-106 388.3 496 45.2
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 1.0e-101 374.8 350 56.9
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 1.3e-101 374.4 505 44.6
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 1.3e-101 374.4 495 47.1
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.8e-98 364.0 473 45.2
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.5e-97 360.1 473 45.5
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 6.3e-96 355.5 475 44.4
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 8.2e-96 355.1 500 42.4
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 5.3e-95 352.4 486 42.8
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 9.1e-95 351.7 455 46.4
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 8.5e-93 345.1 481 43.7
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 2.5e-92 343.6 471 44.4
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 2.7e-91 340.1 484 45.2
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 3.0e-90 336.7 465 43.7
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 3.9e-90 336.3 433 46.4
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 2.2e-88 330.5 339 53.7
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 2.8e-88 330.1 554 40.8
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 4.2e-84 316.2 434 42.9
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.6e-83 314.3 360 48.3
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.5e-78 296.2 339 49.9
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 2.1e-75 287.3 356 47.8
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.2e-74 282.7 468 41.2
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.1e-71 275.0 382 42.1
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.5e-68 264.6 489 38.7
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 3.5e-62 243.4 224 58.0
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 3.4e-57 226.9 473 34.9
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 8.3e-56 222.2 209 56.5
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.1e-52 211.8 237 47.7
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 2.8e-51 207.2 259 44.4
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 5.0e-45 186.4 190 50.0
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 2.3e-42 177.6 247 42.9
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 6.8e-42 176.0 254 42.5
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 2.4e-39 167.5 331 35.0
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 9.2e-39 165.6 198 48.0
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 1.0e-37 162.2 137 62.0
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.3e-37 161.8 117 70.1
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 1.9e-36 157.9 136 62.5
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 9.9e-33 145.6 136 59.6
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 9.9e-33 145.6 213 45.5
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 4.1e-31 140.2 188 42.0
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 3.5e-30 137.1 138 56.5
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 6.0e-30 136.3 187 42.8
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 5.6e-28 129.8 117 58.1
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 7.3e-28 129.4 133 56.4
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.4e-26 125.2 139 48.9
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 8.9e-26 122.5 137 49.6
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 2.9e-24 117.5 424 29.0
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 1.9e-20 104.8 458 26.2
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.5e-20 104.4 320 26.9
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.3e-20 103.6 139 45.3
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 9.9e-17 92.4 108 47.2
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 3.8e-16 90.5 410 24.6
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 1.1e-15 89.0 89 52.8
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.9e-15 88.2 80 55.0
SHI17547 Sapria himalayana HOM05D006564 ORTHO05D007772 3.5e-14 84.0 68 55.9
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 6.0e-14 83.2 66 57.6
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 2.3e-13 81.3 127 36.2
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 3.0e-13 80.9 166 36.1
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 7.4e-12 76.3 86 47.7
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 2.8e-11 74.3 108 41.7
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 1.1e-10 72.4 136 39.0
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 2.6e-09 67.8 478 20.3
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.8e-09 66.6 62 53.2
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 3.8e-08 63.9 198 24.2
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.5e-06 57.4 49 61.2
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 7.9e-06 56.2 62 51.6


User provided reference genes

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