Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 3.1e-145 518.5 268 100.0
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 1.4e-76 290.4 172 90.1
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 5.6e-70 268.5 196 79.1
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 2.8e-69 266.2 185 81.6
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 6.9e-68 261.5 184 81.0
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 9.0e-68 261.2 181 79.6
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 3.4e-67 259.2 192 78.6
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 5.7e-62 241.9 219 60.3
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 1.8e-60 236.9 194 72.7
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 2.4e-60 236.5 152 80.3
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 5.3e-60 235.3 294 48.6
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 1.7e-58 230.3 210 61.9
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 2.1e-56 223.4 208 58.7
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 2.0e-54 216.9 243 52.3
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 2.0e-54 216.9 171 66.1
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 1.2e-51 207.6 164 66.5
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 5.9e-51 205.3 218 57.8
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.7e-50 203.8 251 48.2
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 2.7e-48 196.4 220 55.5
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 3.6e-48 196.1 255 50.2
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 1.0e-47 194.5 175 64.0
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 1.8e-47 193.7 180 62.8
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 5.7e-46 188.7 173 57.8
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 7.4e-46 188.3 176 60.2
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 1.3e-45 187.6 173 59.5
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 1.7e-45 187.2 173 59.5
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 2.2e-45 186.8 172 59.9
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 1.1e-44 184.5 173 59.0
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 5.3e-44 182.2 170 61.8
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 5.3e-44 182.2 170 61.8
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 5.3e-44 182.2 208 51.0
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 1.2e-43 181.0 182 57.7
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 2.0e-43 180.3 173 58.4
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 1.7e-42 177.2 164 60.4
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 2.2e-42 176.8 188 53.2
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 2.9e-42 176.4 164 56.7
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 5.0e-42 175.6 171 56.7
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 6.5e-42 175.3 173 54.9
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 6.5e-42 175.3 181 57.5
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 8.5e-42 174.9 164 54.9
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 8.5e-42 174.9 164 56.1
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 8.5e-42 174.9 181 56.9
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 1.1e-41 174.5 173 59.0
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 1.4e-41 174.1 177 57.6
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 1.2e-40 171.0 187 58.8
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 1.2e-40 171.0 173 55.5
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 1.6e-40 170.6 175 58.3
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 2.7e-40 169.9 177 57.1
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 2.7e-40 169.9 170 54.1
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 3.6e-40 169.5 171 55.6
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 3.6e-40 169.5 157 56.1
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 6.1e-40 168.7 173 54.3
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 8.0e-40 168.3 228 47.8
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 1.4e-39 167.5 173 57.8
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.4e-39 167.5 173 57.8
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.4e-39 167.5 173 57.8
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 1.4e-39 167.5 167 56.9
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 1.8e-39 167.2 169 56.2
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 2.3e-39 166.8 164 56.7
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 2.3e-39 166.8 174 54.6
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 2.3e-39 166.8 165 58.2
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 3.9e-39 166.0 176 54.0
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 3.9e-39 166.0 169 52.1
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 3.9e-39 166.0 170 53.5
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 8.8e-39 164.9 178 51.7
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 1.5e-38 164.1 175 52.0
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 1.5e-38 164.1 166 56.0
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.5e-38 164.1 176 58.5
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 2.6e-38 163.3 227 47.1
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 1.7e-37 160.6 151 59.6
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 3.7e-37 159.5 165 57.0
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 4.1e-36 156.0 183 53.6
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 5.3e-36 155.6 178 52.2
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 7.0e-36 155.2 173 53.2
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 7.0e-36 155.2 253 43.9
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 9.1e-36 154.8 174 52.9
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 1.0e-34 151.4 168 56.0
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 1.7e-34 150.6 187 49.2
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 2.5e-33 146.7 161 55.9
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 2.1e-32 143.7 177 49.2
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 1.0e-31 141.4 164 50.6
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 1.4e-31 141.0 173 48.6
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 4.0e-31 139.4 180 47.2
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 4.0e-31 139.4 180 47.2
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 8.8e-31 138.3 179 48.0
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 1.2e-30 137.9 179 46.9
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 1.5e-30 137.5 185 48.1
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 1.5e-30 137.5 167 47.9
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.5e-30 137.5 176 52.8
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 3.4e-30 136.3 180 46.7
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 3.4e-30 136.3 180 46.7
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 4.4e-30 136.0 184 47.3
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 7.5e-30 135.2 188 48.9
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 1.1e-28 131.3 181 49.2
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 1.8e-28 130.6 179 46.4
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 2.4e-28 130.2 166 44.0
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 3.1e-28 129.8 164 50.0
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 4.1e-28 129.4 198 44.4
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 1.6e-27 127.5 172 50.6
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 2.0e-27 127.1 185 45.9
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 1.0e-26 124.8 181 46.4
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 5.0e-26 122.5 161 45.3
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 8.5e-26 121.7 174 46.0
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 4.2e-25 119.4 187 42.8
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 4.2e-25 119.4 174 44.3
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 9.4e-25 118.2 186 42.5
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 1.0e-23 114.8 138 49.3
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 2.3e-23 113.6 167 44.3
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 3.4e-22 109.8 179 41.3
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 7.5e-22 108.6 82 64.6
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 4.8e-21 105.9 179 44.7
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 7.0e-20 102.1 151 45.0
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 7.0e-20 102.1 144 43.1
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 6.6e-18 95.5 112 49.1
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 2.1e-16 90.5 179 40.8
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 6.3e-13 79.0 169 41.4
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 3.2e-12 76.6 49 65.3
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 3.2e-12 76.6 192 30.7
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 5.9e-11 72.4 181 38.7
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 1.0e-10 71.6 97 45.4
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 5.6e-09 65.9 114 36.0
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.6e-08 64.3 163 36.8
Aqoxy7G03683 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 4.7e-08 62.8 218 30.3
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 1.4e-07 61.2 89 37.1
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 3.1e-07 60.1 165 30.9


User provided reference genes

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