Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G86.10 Capsicum annuum HOM05D004198 ORTHO05D006470 0.0e+00 1343.2 664 100.0
PGSC0003DMG402015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 6.8e-149 531.9 316 84.8
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 2.6e-148 530.0 317 83.6
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 3.2e-146 523.1 317 82.6
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.0e-144 518.1 316 82.0
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.2e-142 511.1 316 81.6
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 1.6e-137 494.2 316 77.5
CAN.G637.13 Capsicum annuum HOM05D000004 ORTHO05D000002 1.9e-127 460.7 358 67.3
CAN.G2793.1 Capsicum annuum HOM05D000673 ORTHO05D011077 3.9e-120 436.4 337 67.1
CAN.G1676.2 Capsicum annuum HOM05D000673 ORTHO05D011077 1.9e-114 417.5 311 70.1
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 4.9e-107 392.9 318 64.8
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 5.4e-106 389.4 318 62.3
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 4.6e-105 386.3 318 61.9
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 4.6e-105 386.3 320 63.8
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.3e-104 384.8 313 64.2
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 1.3e-104 384.8 318 61.3
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 3.0e-104 383.6 319 64.6
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 3.0e-104 383.6 316 63.0
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 5.1e-104 382.9 319 62.4
Lj4C923T7 Lonicera japonica HOM05D004198 ORTHO05D006470 1.1e-103 381.7 320 62.2
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 2.5e-103 380.6 314 63.7
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 3.3e-103 380.2 318 61.6
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 4.3e-103 379.8 318 61.6
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 5.6e-103 379.4 314 60.8
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 1.1e-101 375.2 318 61.3
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 1.4e-101 374.8 314 63.7
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 1.4e-101 374.8 318 59.7
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 2.4e-101 374.0 318 61.6
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 2.4e-101 374.0 317 60.3
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 3.1e-101 373.6 318 61.6
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 4.0e-101 373.2 318 61.3
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 5.3e-101 372.9 318 60.7
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 5.3e-101 372.9 319 60.5
DCAR_011904 Daucus carota HOM05D004198 ORTHO05D006470 1.2e-100 371.7 314 61.1
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 1.5e-100 371.3 318 61.0
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 2.0e-100 370.9 318 59.7
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 2.6e-100 370.5 318 61.3
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 4.5e-100 369.8 318 60.7
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 5.8e-100 369.4 318 60.7
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 5.8e-100 369.4 317 60.3
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 5.8e-100 369.4 318 59.7
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 1.3e-99 368.2 318 59.4
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 1.3e-99 368.2 318 60.7
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 1.3e-99 368.2 323 60.1
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 2.2e-99 367.5 318 60.7
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 2.2e-99 367.5 315 60.3
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 2.9e-99 367.1 317 61.5
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 3.8e-99 366.7 318 60.4
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 8.4e-99 365.5 318 60.4
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 1.1e-98 365.2 318 60.4
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 1.4e-98 364.8 318 60.1
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 1.4e-98 364.8 318 60.4
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 1.4e-98 364.8 318 61.9
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 1.9e-98 364.4 319 59.9
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 3.2e-98 363.6 333 58.6
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 4.2e-98 363.2 319 59.6
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 4.2e-98 363.2 318 59.1
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 7.1e-98 362.5 301 61.5
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 9.3e-98 362.1 318 60.4
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 1.6e-97 361.3 301 63.1
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 2.7e-97 360.5 318 59.1
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 2.7e-97 360.5 318 58.8
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 3.5e-97 360.1 318 59.1
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 3.5e-97 360.1 318 60.1
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.3e-96 358.2 318 59.7
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.3e-96 358.2 318 59.7
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.0e-96 357.1 315 59.4
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 3.9e-96 356.7 318 59.4
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 5.1e-96 356.3 318 58.8
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 8.7e-96 355.5 322 59.0
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.9e-95 354.4 315 59.7
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 1.3e-94 351.7 318 57.2
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 1.6e-94 351.3 319 57.7
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 3.7e-94 350.1 319 58.0
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 3.7e-94 350.1 319 57.7
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 8.1e-94 349.0 348 54.3
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 1.1e-93 348.6 322 58.1
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 1.5e-92 344.7 318 57.9
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 3.8e-91 340.1 327 55.4
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 3.8e-91 340.1 319 57.4
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 4.9e-91 339.7 323 55.1
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 6.5e-91 339.3 318 56.9
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 1.9e-90 337.8 318 56.6
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 2.1e-89 334.3 324 55.9
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 7.9e-89 332.4 318 56.0
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 1.3e-88 331.6 318 56.0
CAN.G575.128 Capsicum annuum HOM05D000673 ORTHO05D011077 5.1e-88 329.7 331 55.0
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 1.5e-87 328.2 317 55.8
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 1.9e-87 327.8 326 53.1
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 1.9e-87 327.8 317 55.5
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 2.1e-86 324.3 328 56.1
CAN.G1139.4 Capsicum annuum HOM05D000402 ORTHO05D011077 3.7e-86 323.6 314 58.3
CAN.G126.70 Capsicum annuum HOM05D000025 ORTHO05D011077 5.3e-85 319.7 334 53.9
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 6.9e-85 319.3 300 54.7
PGSC0003DMG400002302 Solanum tuberosum HOM05D004198 ORTHO05D015220 1.5e-84 318.2 191 83.8
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 9.3e-82 308.9 332 52.1
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 1.8e-80 304.7 302 54.6
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 2.3e-80 304.3 317 52.7
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 6.7e-80 302.8 233 66.5
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 3.3e-79 300.4 239 65.7
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 7.4e-79 299.3 317 52.4
CAN.G126.61 Capsicum annuum HOM05D000025 ORTHO05D011077 1.7e-75 288.1 331 51.1
CAN.G429.1 Capsicum annuum HOM05D000673 ORTHO05D011077 5.0e-75 286.6 213 67.6
vmacro12815 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 1.9e-74 284.6 428 42.5
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.1e-69 268.9 272 52.9
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 2.2e-67 261.2 301 48.8
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 8.5e-67 259.2 324 44.4
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 6.1e-65 253.1 324 43.5
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 2.8e-62 244.2 334 44.0
CAN.G27.34 Capsicum annuum HOM05D005022 ORTHO05D011077 7.0e-61 239.6 307 46.9
CAN.G968.14 Capsicum annuum HOM05D000673 ORTHO05D011077 9.1e-61 239.2 275 52.0
CAN.G126.64 Capsicum annuum HOM05D000025 ORTHO05D011077 2.2e-59 234.6 335 44.8
Zm00001eb257190 Zea mays HOM05D004198 ORTHO05D030652 3.6e-57 227.3 269 48.0
Cc00_g13780 Coffea canephora HOM05D004198 ORTHO05D015220 1.6e-52 211.8 196 58.2
CAN.G18.20 Capsicum annuum HOM05D000673 ORTHO05D011077 1.0e-51 209.1 209 54.5
CAN.G712.2 Capsicum annuum HOM05D000138 ORTHO05D000078 1.1e-50 205.7 228 51.3
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 2.5e-50 204.5 220 51.8
CAN.G668.14 Capsicum annuum HOM05D000064 ORTHO05D011077 4.2e-50 203.8 270 46.7
CAN.G975.11 Capsicum annuum HOM05D000103 ORTHO05D011077 2.3e-48 198.0 195 54.4
CAN.G242.4 Capsicum annuum HOM05D000450 ORTHO05D011077 5.2e-48 196.8 189 53.4
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 7.7e-44 183.0 115 73.9
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 5.0e-43 180.3 115 72.2
CAN.G453.3 Capsicum annuum HOM05D000004 ORTHO05D000002 6.5e-43 179.9 330 39.7
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 2.1e-41 174.9 115 71.3
CAN.G391.4 Capsicum annuum HOM05D001438 ORTHO05D001336 3.7e-38 164.1 307 37.8
CAN.G4.4 Capsicum annuum HOM05D000190 ORTHO05D011077 3.1e-37 161.0 294 37.8
CAN.G65.32 Capsicum annuum HOM05D000147 ORTHO05D011077 4.5e-36 157.1 269 42.0
CAN.G339.2 Capsicum annuum HOM05D000073 ORTHO05D011077 3.6e-33 147.5 216 41.7
CAN.G710.21 Capsicum annuum HOM05D000009 ORTHO05D011077 1.5e-31 142.1 180 46.7
Solyc07g017675.1 Solanum lycopersicum HOM05D004198 ORTHO05D015220 7.5e-31 139.8 82 82.9
Sopen07g006500 Solanum pennellii HOM05D004198 ORTHO05D015220 6.4e-30 136.7 79 84.8
CAN.G22.1 Capsicum annuum HOM05D000312 ORTHO05D011077 1.8e-29 135.2 206 42.7
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 1.1e-26 125.9 85 68.2
CAN.G1443.11 Capsicum annuum HOM05D001339 ORTHO05D011077 3.3e-26 124.4 185 43.8
CAN.G1910.1 Capsicum annuum HOM05D007349 ORTHO05D009317 1.1e-24 119.4 110 55.5
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 1.8e-24 118.6 323 29.1
Prupe.6G271300 Prunus persica HOM05D004198 ORTHO05D015220 6.8e-24 116.7 96 61.5
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 4.4e-23 114.0 70 75.7
CAN.G407.73 Capsicum annuum HOM05D000541 ORTHO05D000137 5.8e-23 113.6 310 28.7
CDE05G0275 Ceratophyllum demersum HOM05D004198 ORTHO05D015220 5.8e-23 113.6 86 64.0
CAN.G1982.3 Capsicum annuum HOM05D000017 ORTHO05D011077 3.7e-22 110.9 307 31.9
Zm00001eb048050 Zea mays HOM05D004198 ORTHO05D030652 7.0e-21 106.7 138 48.6
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 9.2e-21 106.3 67 74.6
Zm00001eb129620 Zea mays HOM05D004198 ORTHO05D030652 9.2e-21 106.3 137 46.7
CAN.G738.13 Capsicum annuum HOM05D000015 ORTHO05D011077 1.3e-19 102.4 161 40.4
CAN.G895.17 Capsicum annuum HOM05D001339 ORTHO05D011077 3.3e-18 97.8 260 31.9
CAN.G1470.9 Capsicum annuum HOM05D000533 ORTHO05D002807 1.2e-17 95.9 70 67.1
Prupe.6G271400 Prunus persica HOM05D004198 ORTHO05D015220 1.6e-17 95.5 83 57.8
CAN.G484.113 Capsicum annuum HOM05D002092 ORTHO05D024780 1.5e-15 89.0 127 46.5
CAN.G1579.27 Capsicum annuum HOM05D000673 ORTHO05D011077 3.4e-15 87.8 176 36.9
CAN.G661.3 Capsicum annuum HOM05D000196 ORTHO05D000279 7.5e-15 86.7 71 60.6
CAN.G6.7 Capsicum annuum HOM05D000743 ORTHO05D011077 9.9e-15 86.3 105 50.5
CAN.G1744.9 Capsicum annuum HOM05D000011 ORTHO05D001721 2.9e-14 84.7 68 64.7
CAN.G22.5 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-13 80.9 224 36.2
Solyc07g017670.3 Solanum lycopersicum HOM05D004198 ORTHO05D030652 1.7e-11 75.5 36 94.4
CAN.G186.16 Capsicum annuum HOM05D000725 ORTHO05D011077 6.6e-11 73.6 125 36.0
TPR.G28245 Trifolium pratense HOM05D001159 ORTHO05D001712 6.2e-09 67.0 41 75.6
Zm00001eb129630 Zea mays HOM05D004198 ORTHO05D015220 3.1e-08 64.7 53 64.2
CAN.G1621.13 Capsicum annuum HOM05D000232 ORTHO05D000145 1.3e-06 59.3 52 63.5


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