Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G79.20 Capsicum annuum HOM05D004256 ORTHO05D005224 2.5e-92 342.0 167 100.0
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 6.9e-50 201.1 120 80.0
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 3.9e-45 185.3 120 75.8
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 8.7e-45 184.1 120 75.0
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 1.3e-40 170.2 119 69.7
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 7.2e-39 164.5 115 67.0
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 1.2e-38 163.7 115 67.8
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 2.4e-34 149.4 114 59.6
Actinidia31383 Actinidia chinensis HOM05D004256 ORTHO05D005224 4.1e-34 148.7 120 59.2
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 2.0e-33 146.4 119 59.7
Dinv16824 Davidia involucrata HOM05D010983 ORTHO05D005224 2.0e-33 146.4 119 58.8
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 1.0e-32 144.1 119 56.3
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 1.7e-32 143.3 122 56.6
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 1.4e-31 140.2 116 59.5
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 7.2e-31 137.9 120 56.7
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 7.2e-31 137.9 122 57.4
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 1.2e-30 137.1 120 56.7
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 2.1e-30 136.3 125 54.4
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 4.7e-30 135.2 122 53.3
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 6.1e-30 134.8 121 54.5
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 7.9e-30 134.4 118 55.1
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 1.8e-29 133.3 121 53.7
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 2.3e-29 132.9 125 55.2
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 3.0e-29 132.5 124 54.8
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 3.0e-29 132.5 112 55.4
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 3.9e-29 132.1 121 55.4
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 3.9e-29 132.1 121 55.4
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 6.7e-29 131.3 115 55.7
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 8.8e-29 131.0 119 54.6
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 1.1e-28 130.6 115 52.2
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 4.4e-28 128.6 118 53.4
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 4.4e-28 128.6 118 55.9
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 5.7e-28 128.3 123 54.5
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 5.7e-28 128.3 120 54.2
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 7.4e-28 127.9 121 53.7
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 9.7e-28 127.5 99 60.6
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 1.7e-27 126.7 124 50.8
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-27 126.7 100 64.0
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-27 126.7 100 64.0
Sc17g0004580 Simmondsia chinensis HOM05D004256 ORTHO05D005224 1.7e-27 126.7 127 51.2
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 2.8e-27 125.9 101 63.4
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 2.8e-27 125.9 101 63.4
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 2.8e-27 125.9 119 51.3
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 3.7e-27 125.6 115 53.9
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 4.8e-27 125.2 125 51.2
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 6.3e-27 124.8 116 51.7
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 6.3e-27 124.8 116 52.6
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 8.2e-27 124.4 123 53.7
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 1.1e-26 124.0 120 54.2
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 1.1e-26 124.0 116 51.7
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 1.8e-26 123.2 121 52.1
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 1.8e-26 123.2 125 52.8
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 5.3e-26 121.7 124 49.2
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 5.3e-26 121.7 121 54.5
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 6.9e-26 121.3 122 52.5
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 9.1e-26 120.9 118 56.8
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 9.1e-26 120.9 120 51.7
FAN08G3148 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.2e-25 120.6 93 63.4
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 1.2e-25 120.6 118 51.7
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 1.5e-25 120.2 115 52.2
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 1.5e-25 120.2 115 57.4
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.6e-25 119.4 92 60.9
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.6e-25 119.4 92 60.9
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 3.4e-25 119.0 114 50.9
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 4.5e-25 118.6 99 57.6
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 4.5e-25 118.6 125 48.8
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 7.7e-25 117.9 122 51.6
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 7.7e-25 117.9 115 53.0
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 1.0e-24 117.5 125 51.2
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 1.3e-24 117.1 124 50.8
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 1.7e-24 116.7 124 50.0
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 2.2e-24 116.3 122 50.8
BcaC09g51294 Brassica carinata HOM05D004256 ORTHO05D005224 8.5e-24 114.4 118 48.3
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 8.5e-24 114.4 118 48.3
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 8.5e-24 114.4 118 48.3
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 8.5e-24 114.4 92 64.1
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 1.1e-23 114.0 116 50.9
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 1.4e-23 113.6 122 48.4
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 1.4e-23 113.6 120 50.0
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 1.9e-23 113.2 125 45.6
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 2.5e-23 112.8 117 50.4
CDE02G0763 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 4.2e-23 112.1 125 47.2
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 5.5e-23 111.7 120 50.0
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 1.2e-22 110.5 120 48.3
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 1.2e-22 110.5 120 48.3
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 1.2e-22 110.5 126 45.2
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 1.2e-22 110.5 106 51.9
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 2.1e-22 109.8 118 46.6
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 2.1e-22 109.8 118 46.6
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 2.1e-22 109.8 120 46.7
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 8.0e-22 107.8 115 47.0
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 1.0e-21 107.5 118 44.1
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 3.0e-21 105.9 116 46.6
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 3.9e-21 105.5 118 44.1
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 6.7e-21 104.8 121 47.1
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 1.5e-20 103.6 122 46.7
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 2.0e-20 103.2 93 57.0
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 2.6e-20 102.8 121 45.5
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 3.3e-20 102.4 96 55.2
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 7.4e-20 101.3 125 45.6
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 8.2e-19 97.8 119 45.4
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 1.4e-18 97.1 81 55.6
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 3.1e-18 95.9 119 46.2
SMO165G0118 Selaginella moellendorffii HOM05D004256 ORTHO05D005224 5.9e-17 91.7 126 40.5
SEGI_28315 Sequoiadendron giganteum HOM05D004256 ORTHO05D005224 5.0e-16 88.6 97 47.4
Zm00001eb161380 Zea mays HOM05D004256 ORTHO05D005224 2.5e-15 86.3 119 42.0
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 1.4e-13 80.5 80 50.0
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 1.4e-10 70.5 67 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 2.0e-09 66.6 54 59.3
CBR_g29910 Chara braunii HOM05D000019 ORTHO05D005224 1.0e-08 64.3 79 43.0


User provided reference genes

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