Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G789.3 Capsicum annuum HOM05D005653 ORTHO05D007013 8.6e-96 353.6 173 100.0
Sopen05g011500 Solanum pennellii HOM05D005653 ORTHO05D007013 1.1e-90 336.7 171 95.9
Solyc05g015860.4 Solanum lycopersicum HOM05D005653 ORTHO05D007013 2.4e-90 335.5 171 95.3
PGSC0003DMG400019810 Solanum tuberosum HOM05D005653 ORTHO05D007013 1.0e-88 330.1 171 94.2
Nitab4.5_0000340g0070 Nicotiana tabacum HOM05D005653 ORTHO05D007013 2.5e-87 325.5 169 92.9
Peaxi162Scf00128g01533 Petunia axillaris HOM05D005653 ORTHO05D007013 7.3e-87 323.9 171 91.8
Cc11_g17180 Coffea canephora HOM05D005653 ORTHO05D007013 1.9e-82 309.3 171 83.6
Actinidia39799 Actinidia chinensis HOM05D005653 ORTHO05D007013 1.6e-81 306.2 171 81.9
Rhsim12G0094700 Rhododendron simsii HOM05D005653 ORTHO05D007013 2.7e-81 305.4 171 83.0
CSS0037525 Camellia sinensis var. sinensis HOM05D005653 ORTHO05D007013 4.6e-81 304.7 171 82.5
CSS0048785 Camellia sinensis var. sinensis HOM05D005653 ORTHO05D007013 4.6e-81 304.7 171 82.5
Dinv17587 Davidia involucrata HOM05D005653 ORTHO05D007013 6.0e-81 304.3 171 81.9
Cfa009387 Carpinus fangiana HOM05D005653 ORTHO05D007013 7.8e-81 303.9 171 81.3
CANSAT01G0083 Cannabis sativa HOM05D005653 ORTHO05D007013 1.7e-80 302.8 171 81.3
Migut.K01002 Erythranthe guttata HOM05D005653 ORTHO05D007013 2.3e-80 302.4 171 81.9
arahy.Tifrunner.gnm1.ann1.8E8WMD Arachis hypogaea HOM05D005653 ORTHO05D007013 5.1e-80 301.2 171 81.9
arahy.Tifrunner.gnm1.ann1.K5AHSV Arachis hypogaea HOM05D005653 ORTHO05D007013 5.1e-80 301.2 171 81.9
Potri.003G168800 Populus trichocarpa HOM05D005653 ORTHO05D007013 8.7e-80 300.4 171 80.1
Eucgr.B03521 Eucalyptus grandis HOM05D005653 ORTHO05D007013 1.1e-79 300.1 171 78.9
MD13G1122300 Malus domestica HOM05D005653 ORTHO05D007013 1.1e-79 300.1 171 79.5
Lalb_Chr10g0092041 Lupinus albus HOM05D005653 ORTHO05D007013 2.5e-79 298.9 171 81.9
HanXRQChr08g0209891 Helianthus annuus HOM05D005653 ORTHO05D007013 3.3e-79 298.5 171 80.1
Lj3A1072T24 Lonicera japonica HOM05D005653 ORTHO05D007013 4.3e-79 298.1 171 80.7
QL03p051746 Quercus lobata HOM05D005653 ORTHO05D007013 4.3e-79 298.1 170 77.6
FvH4_4g23470 Fragaria vesca HOM05D005653 ORTHO05D007013 5.6e-79 297.7 171 77.2
FAN12G1333 Fragaria x ananassa HOM05D005653 ORTHO05D007013 5.6e-79 297.7 171 77.2
Lsat_1_v5_gn_8_147520 Lactuca sativa HOM05D005653 ORTHO05D007013 5.6e-79 297.7 171 79.5
Medtr7g022310 Medicago truncatula HOM05D005653 ORTHO05D007013 5.6e-79 297.7 171 79.5
CiPaw.05G107200 Carya illinoinensis HOM05D005653 ORTHO05D007013 7.3e-79 297.4 171 78.4
Manes.12G008600 Manihot esculenta HOM05D005653 ORTHO05D007013 7.3e-79 297.4 171 79.5
Duzib268G1459 Durio zibethinus HOM05D005653 ORTHO05D007013 1.3e-78 296.6 171 79.5
Sabra03G0123700 Salix brachista HOM05D005653 ORTHO05D007013 1.3e-78 296.6 171 79.5
FAN07G0042 Fragaria x ananassa HOM05D005653 ORTHO05D007013 1.6e-78 296.2 171 76.6
Glyma.18G284300 Glycine max HOM05D005653 ORTHO05D007013 1.6e-78 296.2 171 79.5
Gohir.D01G100300 Gossypium hirsutum HOM05D005653 ORTHO05D007013 1.6e-78 296.2 171 78.9
Gorai.002G181300 Gossypium raimondii HOM05D005653 ORTHO05D007013 1.6e-78 296.2 171 78.9
HanXRQChr08g0209781 Helianthus annuus HOM05D005653 ORTHO05D007013 1.6e-78 296.2 171 78.9
SalBow2G0115 Salvia bowleyana HOM05D005653 ORTHO05D007013 1.6e-78 296.2 171 79.5
DCAR_024662 Daucus carota HOM05D005653 ORTHO05D007013 2.1e-78 295.8 171 78.4
vmacro16096 Vaccinium macrocarpon HOM05D005653 ORTHO05D007013 2.1e-78 295.8 189 75.1
MBI11_g05337_MAGBIO Magnolia biondii HOM05D005653 ORTHO05D007013 2.8e-78 295.4 171 78.9
Ah.03g135980 Amaranthus hybridus HOM05D005653 ORTHO05D007013 3.6e-78 295.0 173 78.0
Gohir.A01G153900 Gossypium hirsutum HOM05D005653 ORTHO05D007013 3.6e-78 295.0 171 78.4
Phvul.008G017200 Phaseolus vulgaris HOM05D005653 ORTHO05D007013 3.6e-78 295.0 171 79.5
Hund06105 Selenicereus undatus HOM05D005653 ORTHO05D007013 3.6e-78 295.0 171 78.4
VMungo1383G3612 Vigna mungo HOM05D005653 ORTHO05D007013 4.8e-78 294.7 171 80.1
Ca_07130_v3 Cicer arietinum L. HOM05D005653 ORTHO05D007013 6.2e-78 294.3 169 79.3
RcHm_v2.0_Chr4g0429841 Rosa chinensis HOM05D005653 ORTHO05D007013 6.2e-78 294.3 171 76.0
Prupe.1G222900 Prunus persica HOM05D005653 ORTHO05D007013 8.1e-78 293.9 171 77.8
GSVIVG01010526001 Vitis vinifera HOM05D005653 ORTHO05D007013 8.1e-78 293.9 171 78.4
Ciclev10031168m.g Citrus clementina HOM05D005653 ORTHO05D007013 1.1e-77 293.5 171 77.8
Nn4g22260 Nelumbo nucifera HOM05D005653 ORTHO05D007013 1.1e-77 293.5 171 78.9
PGR102G3026 Punica granatum HOM05D005653 ORTHO05D007013 1.1e-77 293.5 171 78.4
Aqoxy5G03294 Aquilegia oxysepala HOM05D005653 ORTHO05D007013 1.4e-77 293.1 171 77.2
Thecc.02G202100 Theobroma cacao HOM05D005653 ORTHO05D007013 2.4e-77 292.4 171 77.2
TWI18G0855 Tripterygium wilfordii HOM05D005653 ORTHO05D007013 2.4e-77 292.4 171 78.4
TAR374G1158 Trochodendron aralioides HOM05D005653 ORTHO05D007013 3.1e-77 292.0 171 76.6
Glyma.02G097200 Glycine max HOM05D005653 ORTHO05D007013 5.3e-77 291.2 171 78.4
COL.COLO4_05009 Corchorus olitorius HOM05D005653 ORTHO05D007013 6.9e-77 290.8 171 77.8
Sed0008245 Sechium edule HOM05D005653 ORTHO05D007013 1.2e-76 290.0 171 77.2
Psat3g188000 Pisum sativum HOM05D005653 ORTHO05D007013 2.0e-76 289.3 171 76.6
unitig_26.g10407 Utricularia gibba HOM05D005653 ORTHO05D007013 2.0e-76 289.3 171 75.4
ClCG06G002070 Citrullus lanatus HOM05D005653 ORTHO05D007013 3.4e-76 288.5 171 77.2
Sabra01G0042500 Salix brachista HOM05D005653 ORTHO05D007013 5.8e-76 287.7 171 76.6
AUR62028902 Chenopodium quinoa HOM05D005653 ORTHO05D007013 7.6e-76 287.3 173 77.5
Lj1g0002640 Lotus japonicus HOM05D005653 ORTHO05D007013 1.7e-75 286.2 171 77.2
Os01g0100900 Oryza sativa ssp. japonica HOM05D005653 ORTHO05D007013 2.2e-75 285.8 171 77.2
HPP92_006272 Vanilla planifolia HOM05D005653 ORTHO05D007013 3.8e-75 285.0 171 75.4
PSO017G4941 Papaver somniferum HOM05D005653 ORTHO05D007013 4.9e-75 284.6 171 76.6
AUR62005648 Chenopodium quinoa HOM05D005653 ORTHO05D007013 1.4e-74 283.1 173 75.7
MELO3C022321.2 Cucumis melo HOM05D005653 ORTHO05D007013 1.9e-74 282.7 171 74.9
CsaV3_6G008140 Cucumis sativus L. HOM05D005653 ORTHO05D007013 1.9e-74 282.7 171 74.9
PSO478G2696 Papaver somniferum HOM05D005653 ORTHO05D007013 3.2e-74 282.0 171 75.4
Atru.BG.292.p Acer truncatum HOM05D005653 ORTHO05D007013 9.3e-74 280.4 167 78.4
CDE05G3552 Ceratophyllum demersum HOM05D005653 ORTHO05D007013 9.3e-74 280.4 171 74.3
THA.LOC104820527 Tarenaya hassleriana HOM05D005653 ORTHO05D007013 1.2e-73 280.0 167 73.7
AL1G41470 Arabidopsis lyrata HOM05D005653 ORTHO05D007013 3.5e-73 278.5 167 74.3
AT1G27980 Arabidopsis thaliana HOM05D005653 ORTHO05D007013 3.5e-73 278.5 167 74.3
C03p74690 Brassica napus HOM05D005653 ORTHO05D007013 3.5e-73 278.5 167 76.0
Carub.0001s2643 Capsella rubella HOM05D005653 ORTHO05D007013 3.5e-73 278.5 167 74.3
Aa31sc146G110 Aethionema arabicum HOM05D005653 ORTHO05D007013 6.0e-73 277.7 167 73.7
BraA08t34547Z Brassica rapa HOM05D005653 ORTHO05D007013 6.0e-73 277.7 167 76.0
Thhalv10009378m.g Eutrema salsugineum HOM05D005653 ORTHO05D007013 7.8e-73 277.3 167 74.9
Sp1g24170 Schrenkiella parvula HOM05D005653 ORTHO05D007013 1.0e-72 276.9 167 74.3
BolC3t19717H Brassica oleracea HOM05D005653 ORTHO05D007013 1.3e-72 276.6 167 75.4
ECA233G0831 Erigeron canadensis HOM05D005653 ORTHO05D007013 1.5e-71 273.1 155 82.6
ATR0561G080 Amborella trichopoda HOM05D005653 ORTHO05D007013 4.8e-70 268.1 173 71.1
Zm00001eb334070 Zea mays HOM05D005653 ORTHO05D007013 9.0e-69 263.8 205 63.4
A08p25960 Brassica napus HOM05D005653 ORTHO05D007013 3.4e-68 261.9 197 64.5
SEGI_37890 Sequoiadendron giganteum HOM05D005653 ORTHO05D007013 4.5e-68 261.5 171 70.2
Haze_12446 Corylus avellana HOM05D005653 ORTHO05D007013 9.3e-66 253.8 171 71.3
EL10Ac6g13536 Beta vulgaris HOM05D005653 ORTHO05D007013 2.1e-62 242.7 171 69.6
SHI17985 Sapria himalayana HOM05D005653 ORTHO05D007013 2.4e-61 239.2 205 57.1
SGA_v2.0_scaffold46G17390 Striga asiatica HOM05D005653 ORTHO05D007013 2.4e-61 239.2 153 71.9
SMO117G0322 Selaginella moellendorffii HOM05D005653 ORTHO05D007013 1.3e-59 233.4 171 62.0
Mapoly0064s0066 Marchantia polymorpha HOM05D005653 ORTHO05D007013 2.9e-59 232.3 171 61.4
CARHR027410 Cardamine hirsuta HOM05D005653 ORTHO05D007013 6.0e-57 224.6 133 75.2
Pp3c25_6390 Physcomitrium patens HOM05D005653 ORTHO05D007013 3.7e-54 215.3 171 56.1
CBR_g49954 Chara braunii HOM05D005653 ORTHO05D007013 5.0e-51 204.9 169 56.2
PRCOL_00004852 Prasinoderma coloniale HOM05D005653 ORTHO05D007013 4.8e-46 188.3 172 51.7
MCO01G158 Micromonas commoda HOM05D005653 ORTHO05D007013 7.2e-34 147.9 170 43.5
Cfa025335 Carpinus fangiana HOM05D005653 ORTHO05D007013 1.2e-33 147.1 180 39.4
Haze_26914 Corylus avellana HOM05D005653 ORTHO05D007013 2.7e-33 146.0 168 40.5
Cre03.g155051 Chlamydomonas reinhardtii HOM05D005653 ORTHO05D007013 1.3e-30 137.1 179 39.7
Potri.001G059001 Populus trichocarpa HOM05D005653 ORTHO05D007013 6.7e-24 114.8 68 73.5
Nn1g00005 Nelumbo nucifera HOM05D005653 ORTHO05D007013 1.2e-20 104.0 58 77.6
Nn1g02921 Nelumbo nucifera HOM05D005653 ORTHO05D007013 1.2e-20 104.0 58 77.6
Sc04g0010280 Simmondsia chinensis HOM05D005653 ORTHO05D007013 8.5e-19 97.8 55 81.8
BcaC05g26610 Brassica carinata HOM05D005653 ORTHO05D007013 2.2e-11 73.2 139 37.4
MELO3C032670.2 Cucumis melo HOM05D011747 ORTHO05D007013 2.2e-11 73.2 48 66.7
MELO3C031393.2 Cucumis melo HOM05D005653 ORTHO05D005467 1.1e-10 70.9 70 51.4
Actinidia18655 Actinidia chinensis HOM05D005653 ORTHO05D007013 9.4e-10 67.8 43 69.8
Actinidia40343 Actinidia chinensis HOM05D000263 ORTHO05D010929 4.7e-09 65.5 46 65.2
Actinidia18467 Actinidia chinensis HOM05D005653 ORTHO05D007013 2.3e-08 63.2 89 40.4
CARHR035100 Cardamine hirsuta HOM05D005653 ORTHO05D007013 1.2e-07 60.8 32 87.5
BolC5t31379H Brassica oleracea HOM05D005653 ORTHO05D007013 4.4e-07 58.9 40 65.0
Actinidia35048 Actinidia chinensis HOM05D000945 ORTHO05D056219 2.2e-06 56.6 61 54.1


User provided reference genes

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