Gene: PGSC0003DMG400019810

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400019810
  • Transcript Identifier PGSC0003DMT400051021
  • Gene Type Coding gene
  • Location ST4.03ch05 : 15144808-15151200 : positive

Gene Family Information

  • ID HOM05D005653
  • #Genes/#Species 136/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37444661
  • id PGSC0003DMG400019810.v4.03
  • uniprot M1BR59

Descriptions

  • Description Sphingosine phosphate lyase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0030149
IBA
IEA
GOA Databasesphingolipid catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0008117
IBA
IEA
GOA Databasesphinganine-1-phosphate aldolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IBA
IEA
GOA Databaseendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002129 Pyridoxal phosphate-dependent decarboxylase
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
Mapman id Description
5.7.5.4 Lipid metabolism.lipid degradation.sphingolipid degradation.sphingosine-1-phosphate lyase