Gene: CARHR027410

General Information

Structural Information

  • Species Cardamine hirsuta
  • Gene Identifier CARHR027410
  • Transcript Identifier CARHR027410.2
  • Gene Type Coding gene
  • Location Chr1 : 10007422-10010978 : positive

Gene Family Information

  • ID HOM05D005653
  • #Genes/#Species 136/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CARHR027410.2

Descriptions

  • Description Sphingosine-1-phosphate lyase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0030149
ISO
PLAZA Integrative Orthologysphingolipid catabolic process AT1G27980

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
InterProcatalytic activity
GO:0008117
ISO
PLAZA Integrative Orthologysphinganine-1-phosphate aldolase activity AT1G27980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G27980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR002129 Pyridoxal phosphate-dependent decarboxylase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
Mapman id Description
5.7.5.4 Lipid metabolism.lipid degradation.sphingolipid degradation.sphingosine-1-phosphate lyase