Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G786.14 Capsicum annuum HOM05D002728 ORTHO05D002874 1.0e-102 376.7 187 100.0
CAN.G674.8 Capsicum annuum HOM05D002728 ORTHO05D002874 1.9e-16 90.1 243 29.2
Solyc10g081830.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 2.5e-16 89.7 243 29.2
Sopen10g032350 Solanum pennellii HOM05D002728 ORTHO05D002874 3.3e-16 89.4 242 29.3
PGSC0003DMG400028143 Solanum tuberosum HOM05D002728 ORTHO05D002874 3.3e-16 89.4 243 29.6
Peaxi162Scf00211g00232 Petunia axillaris HOM05D002728 ORTHO05D002874 4.7e-15 85.5 141 42.6
Nitab4.5_0002165g0040 Nicotiana tabacum HOM05D002728 ORTHO05D002874 6.2e-15 85.1 244 29.5
Nitab4.5_0005257g0030 Nicotiana tabacum HOM05D002728 ORTHO05D002874 8.1e-15 84.7 244 29.5
Peaxi162Scf00083g01924 Petunia axillaris HOM05D002728 ORTHO05D002874 1.1e-14 84.3 243 28.8
Dinv43383 Davidia involucrata HOM05D002728 ORTHO05D002874 1.5e-13 80.5 243 28.0
Dinv41242 Davidia involucrata HOM05D002728 ORTHO05D002874 2.2e-12 76.6 244 26.6
Dinv42718 Davidia involucrata HOM05D002728 ORTHO05D002874 4.9e-12 75.5 107 40.2
MSTRG.19298 Avicennia marina HOM05D002728 ORTHO05D002874 8.4e-12 74.7 246 26.4
unitig_22.g5140 Utricularia gibba HOM05D002728 ORTHO05D002874 1.1e-11 74.3 219 26.0
Oeu028651.1 Olea europaea HOM05D002728 ORTHO05D002874 3.2e-11 72.8 107 39.3
Hma1.2p1_1025F.1_g249360 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 5.4e-11 72.0 135 34.8
SGA_v2.0_scaffold13G06659 Striga asiatica HOM05D002728 ORTHO05D002874 5.4e-11 72.0 115 39.1
Migut.J00687 Erythranthe guttata HOM05D002728 ORTHO05D002874 7.1e-11 71.6 244 24.6
CSS0050130 Camellia sinensis var. sinensis HOM05D002728 ORTHO05D002874 2.1e-10 70.1 114 38.6
Psat6g007800 Pisum sativum HOM05D002728 ORTHO05D002874 2.1e-10 70.1 208 26.9
Hma1.2p1_0155F.1_g068590 Hydrangea macrophylla HOM05D002728 ORTHO05D002874 6.0e-10 68.6 121 33.9
CAN.G308.33 Capsicum annuum HOM05D002728 ORTHO05D002874 7.8e-10 68.2 243 25.1
vmacro06011 Vaccinium macrocarpon HOM05D002728 ORTHO05D002874 7.8e-10 68.2 107 35.5
Actinidia17316 Actinidia chinensis HOM05D002728 ORTHO05D002874 1.3e-09 67.4 107 35.5
Psat6g007840 Pisum sativum HOM05D002728 ORTHO05D002874 3.0e-09 66.2 148 32.4
Rhsim03G0264700 Rhododendron simsii HOM05D002728 ORTHO05D002874 3.0e-09 66.2 109 33.9
Cc06_g06720 Coffea canephora HOM05D002728 ORTHO05D002874 3.9e-09 65.9 125 32.8
Nn8g38588 Nelumbo nucifera HOM05D002728 ORTHO05D002874 3.9e-09 65.9 111 35.1
Nitab4.5_0004944g0050 Nicotiana tabacum HOM05D002728 ORTHO05D002874 3.9e-09 65.9 111 33.3
Nitab4.5_0006838g0010 Nicotiana tabacum HOM05D002728 ORTHO05D002874 3.9e-09 65.9 111 33.3
Lsat_1_v5_gn_8_67780 Lactuca sativa HOM05D002728 ORTHO05D002874 6.6e-09 65.1 112 34.8
Solyc07g018300.3 Solanum lycopersicum HOM05D002728 ORTHO05D002874 6.6e-09 65.1 120 32.5
Sopen07g007450 Solanum pennellii HOM05D002728 ORTHO05D002874 6.6e-09 65.1 120 32.5
TAR626G0658 Trochodendron aralioides HOM05D002728 ORTHO05D002874 6.6e-09 65.1 111 36.9
GSVIVG01029218001 Vitis vinifera HOM05D002728 ORTHO05D002874 6.6e-09 65.1 107 36.4
HanXRQChr12g0365421 Helianthus annuus HOM05D002728 ORTHO05D002874 8.6e-09 64.7 112 34.8
PGSC0003DMG403013782 Solanum tuberosum HOM05D002728 ORTHO05D002874 8.6e-09 64.7 111 33.3
SGA_v2.0_scaffold66G22411 Striga asiatica HOM05D002728 ORTHO05D002874 1.1e-08 64.3 234 23.5
QL12p024865 Quercus lobata HOM05D002728 ORTHO05D002874 1.9e-08 63.5 242 23.1
Ciclev10009139m.g Citrus clementina HOM05D002728 ORTHO05D002874 2.5e-08 63.2 249 23.3
DCAR_020125 Daucus carota HOM05D002728 ORTHO05D010830 2.5e-08 63.2 115 34.8
Sc08g0005300 Simmondsia chinensis HOM05D002728 ORTHO05D002874 3.3e-08 62.8 234 24.4
Aa31LG7G11480 Aethionema arabicum HOM05D002728 ORTHO05D002874 5.6e-08 62.0 239 23.0
TAR383G0981 Trochodendron aralioides HOM05D002728 ORTHO05D002874 7.3e-08 61.6 110 34.5
Duzib168G0477 Durio zibethinus HOM05D002728 ORTHO05D002874 9.6e-08 61.2 243 24.3
GSVIVG01035537001 Vitis vinifera HOM05D002728 ORTHO05D002874 1.2e-07 60.8 236 23.7
MSTRG.6224 Avicennia marina HOM05D002728 ORTHO05D002874 1.6e-07 60.5 236 22.0
Haze_22088 Corylus avellana HOM05D002728 ORTHO05D002874 2.1e-07 60.1 241 22.8
Glyma.14G133400 Glycine max HOM05D002728 ORTHO05D002874 2.8e-07 59.7 110 35.5
Atru.chr7.2627 Acer truncatum HOM05D002728 ORTHO05D002874 3.6e-07 59.3 244 23.0
MBI16_g31783_MAGBIO Magnolia biondii HOM05D002728 ORTHO05D002874 3.6e-07 59.3 138 31.9
Ah.14g083770 Amaranthus hybridus HOM05D002728 ORTHO05D002874 4.7e-07 58.9 242 23.6
Lalb_Chr07g0180521 Lupinus albus HOM05D002728 ORTHO05D002874 4.7e-07 58.9 107 32.7
CDE10G0899 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 6.2e-07 58.5 93 34.4
COL.COLO4_19047 Corchorus olitorius HOM05D002728 ORTHO05D002874 6.2e-07 58.5 243 23.5
MELO3C017458.2 Cucumis melo HOM05D002728 ORTHO05D002874 6.2e-07 58.5 118 32.2
Psat5g275120 Pisum sativum HOM05D002728 ORTHO05D002874 6.2e-07 58.5 198 24.7
CiPaw.08G018700 Carya illinoinensis HOM05D002728 ORTHO05D002874 8.1e-07 58.2 248 22.2
Glyma.17G202200 Glycine max HOM05D002728 ORTHO05D002874 8.1e-07 58.2 106 32.1
Psat0s312g0040 Pisum sativum HOM05D002728 ORTHO05D002874 8.1e-07 58.2 106 32.1
Aqoxy7G03019 Aquilegia oxysepala HOM05D002728 ORTHO05D002874 1.1e-06 57.8 111 33.3
CDE10G0114 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 1.1e-06 57.8 245 22.4
Ca_12874_v3 Cicer arietinum L. HOM05D002728 ORTHO05D002874 1.1e-06 57.8 241 23.2
Migut.J01489 Erythranthe guttata HOM05D002728 ORTHO05D002874 1.1e-06 57.8 239 23.0
PGR044G1401 Punica granatum HOM05D002728 ORTHO05D002874 1.1e-06 57.8 107 32.7
CDE10G0012 Ceratophyllum demersum HOM05D002728 ORTHO05D002874 1.4e-06 57.4 109 30.3
ECA236G0567 Erigeron canadensis HOM05D002728 ORTHO05D002874 1.4e-06 57.4 103 32.0
Sed0008387 Sechium edule HOM05D002728 ORTHO05D002874 1.4e-06 57.4 107 32.7
Cfa013500 Carpinus fangiana HOM05D002728 ORTHO05D002874 1.8e-06 57.0 109 31.2
CiPaw.07G192700 Carya illinoinensis HOM05D002728 ORTHO05D002874 1.8e-06 57.0 107 33.6
CsaV3_1G031640 Cucumis sativus L. HOM05D002728 ORTHO05D002874 1.8e-06 57.0 107 32.7
Eucgr.C02095 Eucalyptus grandis HOM05D002728 ORTHO05D002874 1.8e-06 57.0 239 21.3
QL02p097865 Quercus lobata HOM05D002728 ORTHO05D002874 1.8e-06 57.0 107 32.7
Thecc.09G005900 Theobroma cacao HOM05D002728 ORTHO05D002874 2.4e-06 56.6 241 23.7
Cpa.g.sc1312.2 Carica papaya HOM05D002728 ORTHO05D002874 3.1e-06 56.2 116 30.2
Manes.03G002500 Manihot esculenta HOM05D002728 ORTHO05D002874 3.1e-06 56.2 245 21.2
Hund26344 Selenicereus undatus HOM05D002728 ORTHO05D002874 3.1e-06 56.2 245 24.5
VMungo0647G0359 Vigna mungo HOM05D002728 ORTHO05D002874 3.1e-06 56.2 111 32.4
AT2G24490 Arabidopsis thaliana HOM05D002728 ORTHO05D002874 4.0e-06 55.8 243 21.4
Carub.0004s0383 Capsella rubella HOM05D002728 ORTHO05D002874 4.0e-06 55.8 244 20.9
Phvul.001G058500 Phaseolus vulgaris HOM05D002728 ORTHO05D002874 4.0e-06 55.8 111 32.4
TPR.G12058 Trifolium pratense HOM05D002728 ORTHO05D002874 5.2e-06 55.5 105 32.4
AL4G14970 Arabidopsis lyrata HOM05D002728 ORTHO05D002874 6.8e-06 55.1 243 21.4
ClCG05G017480 Citrullus lanatus HOM05D002728 ORTHO05D002874 6.8e-06 55.1 230 22.2
Peaxi162Scf00231g00728 Petunia axillaris HOM05D002728 ORTHO05D002874 6.8e-06 55.1 92 34.8
Cc06_g13200 Coffea canephora HOM05D002728 ORTHO05D002874 8.9e-06 54.7 242 23.1
Eucgr.C02332 Eucalyptus grandis HOM05D002728 ORTHO05D002874 8.9e-06 54.7 107 30.8
Oeu009852.1 Olea europaea HOM05D002728 ORTHO05D002874 8.9e-06 54.7 236 21.2
RcHm_v2.0_Chr6g0304821 Rosa chinensis HOM05D002728 ORTHO05D002874 8.9e-06 54.7 113 31.0


User provided reference genes

Program Settings