Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G758.9 Capsicum annuum HOM05D002575 ORTHO05D024796 1.1e-93 346.7 177 100.0
CAN.G843.28 Capsicum annuum HOM05D002575 ORTHO05D005851 2.2e-70 269.2 209 70.8
PGSC0003DMG400014182 Solanum tuberosum HOM05D002575 ORTHO05D005851 4.1e-61 238.4 208 63.5
Sopen03g037310 Solanum pennellii HOM05D002575 ORTHO05D005851 2.1e-60 236.1 210 63.3
Nitab4.5_0002450g0070 Nicotiana tabacum HOM05D002575 ORTHO05D005851 6.6e-59 231.1 207 61.8
Peaxi162Scf00314g00047 Petunia axillaris HOM05D002575 ORTHO05D005851 5.4e-53 211.5 207 58.5
Hma1.2p1_0471F.1_g159480 Hydrangea macrophylla HOM05D002575 ORTHO05D005851 1.6e-41 173.3 211 52.1
Oeu035881.1 Olea europaea HOM05D002575 ORTHO05D005851 3.1e-40 169.1 214 48.1
Dinv02695 Davidia involucrata HOM05D002575 ORTHO05D005851 9.9e-39 164.1 210 49.0
SalBow3G3712 Salvia bowleyana HOM05D002575 ORTHO05D005851 4.9e-38 161.8 215 47.4
Potri.012G043700 Populus trichocarpa HOM05D002575 ORTHO05D005851 4.2e-37 158.7 223 44.4
CAN.G135.19 Capsicum annuum HOM05D002575 ORTHO05D024796 7.1e-37 157.9 93 80.6
Actinidia18726 Actinidia chinensis HOM05D002575 ORTHO05D005851 9.3e-37 157.5 216 45.4
Atru.chr9.1637 Acer truncatum HOM05D002575 ORTHO05D005851 1.6e-36 156.8 215 44.7
GSVIVG01008482001 Vitis vinifera HOM05D002575 ORTHO05D005851 3.5e-36 155.6 202 44.6
Potri.015G034500 Populus trichocarpa HOM05D002575 ORTHO05D005851 7.9e-36 154.5 225 45.3
Sabra12G0030600 Salix brachista HOM05D002575 ORTHO05D005851 1.0e-35 154.1 226 46.5
Cc00_g07980 Coffea canephora HOM05D002575 ORTHO05D005851 1.3e-35 153.7 218 45.4
Rhsim05G0011000 Rhododendron simsii HOM05D002575 ORTHO05D005851 1.3e-35 153.7 216 44.0
CSS0040654 Camellia sinensis var. sinensis HOM05D002575 ORTHO05D005851 2.3e-35 152.9 214 48.6
CSS0046441 Camellia sinensis var. sinensis HOM05D002575 ORTHO05D005851 2.3e-35 152.9 214 48.6
Lj5P161T22 Lonicera japonica HOM05D002575 ORTHO05D005851 8.7e-35 151.0 212 47.2
MD14G1238900 Malus domestica HOM05D002575 ORTHO05D005851 1.5e-34 150.2 218 46.3
Cpa.g.sc3.363 Carica papaya HOM05D002575 ORTHO05D005851 1.9e-34 149.8 215 46.5
Solyc03g118420.4 Solanum lycopersicum HOM05D002575 ORTHO05D005851 2.5e-34 149.4 97 80.4
TWI15G0942 Tripterygium wilfordii HOM05D000154 ORTHO05D005851 2.5e-34 149.4 218 42.7
Cfa020632 Carpinus fangiana HOM05D002575 ORTHO05D005851 3.3e-34 149.1 215 47.0
TAR636G1503 Trochodendron aralioides HOM05D002575 ORTHO05D005851 7.3e-34 147.9 219 43.4
Haze_18906 Corylus avellana HOM05D002575 ORTHO05D005851 9.6e-34 147.5 216 46.3
ECA233G4261 Erigeron canadensis HOM05D002575 ORTHO05D005851 9.6e-34 147.5 199 47.7
Rhsim08G0127300 Rhododendron simsii HOM05D002575 ORTHO05D005851 1.3e-33 147.1 216 41.7
Hund11722 Selenicereus undatus HOM05D002575 ORTHO05D005851 2.1e-33 146.4 217 42.4
CAN.G149.6 Capsicum annuum HOM05D002575 ORTHO05D024796 2.8e-33 146.0 83 86.7
DCAR_003534 Daucus carota HOM05D002575 ORTHO05D005851 2.8e-33 146.0 216 44.9
MD06G1232100 Malus domestica HOM05D002575 ORTHO05D005851 3.6e-33 145.6 219 43.4
Thecc.04G023100 Theobroma cacao HOM05D002575 ORTHO05D005851 4.8e-33 145.2 212 43.4
Ciclev10018607m.g Citrus clementina HOM05D002575 ORTHO05D005851 8.1e-33 144.4 218 43.6
Manes.06G003200 Manihot esculenta HOM05D002575 ORTHO05D005851 2.4e-32 142.9 209 44.5
Prupe.5G236400 Prunus persica HOM05D002575 ORTHO05D005851 3.1e-32 142.5 218 43.6
COL.COLO4_38532 Corchorus olitorius HOM05D002575 ORTHO05D005851 5.3e-32 141.7 210 44.8
TAR636G2646 Trochodendron aralioides HOM05D002575 ORTHO05D005851 5.3e-32 141.7 224 41.1
Nn3g16590 Nelumbo nucifera HOM05D002575 ORTHO05D005851 9.0e-32 141.0 226 38.9
Nn3g16592 Nelumbo nucifera HOM05D002575 ORTHO05D005851 1.2e-31 140.6 222 40.1
Thecc.03G042800 Theobroma cacao HOM05D002575 ORTHO05D005851 1.2e-31 140.6 211 42.7
TPR.G22312 Trifolium pratense HOM05D002575 ORTHO05D005851 1.2e-31 140.6 215 44.2
Aqoxy1G02870 Aquilegia oxysepala HOM05D002575 ORTHO05D005851 1.5e-31 140.2 210 42.9
Glyma.09G173000 Glycine max HOM05D002575 ORTHO05D005851 1.5e-31 140.2 200 44.5
EL10Ac3g05872 Beta vulgaris HOM05D002575 ORTHO05D005851 2.0e-31 139.8 210 43.3
PGR083G2696 Punica granatum HOM05D000154 ORTHO05D005851 2.6e-31 139.4 205 45.4
QL10p031431 Quercus lobata HOM05D002575 ORTHO05D005851 2.6e-31 139.4 218 41.3
CiPaw.15G146400 Carya illinoinensis HOM05D002575 ORTHO05D005851 5.8e-31 138.3 221 43.4
Duzib205G1961 Durio zibethinus HOM05D002575 ORTHO05D005851 5.8e-31 138.3 211 43.1
HanXRQChr08g0227431 Helianthus annuus HOM05D002575 ORTHO05D005851 5.8e-31 138.3 194 47.9
Lj2g0016045 Lotus japonicus HOM05D002575 ORTHO05D005851 5.8e-31 138.3 219 41.1
Lalb_Chr09g0330291 Lupinus albus HOM05D002575 ORTHO05D005851 5.8e-31 138.3 222 41.4
unitig_62.g23809 Utricularia gibba HOM05D002575 ORTHO05D005851 5.8e-31 138.3 204 43.6
Psat1g030040 Pisum sativum HOM05D002575 ORTHO05D005851 1.3e-30 137.1 214 42.5
Glyma.07G104700 Glycine max HOM05D002575 ORTHO05D005851 1.7e-30 136.7 206 40.8
ATR0753G085 Amborella trichopoda HOM05D002575 ORTHO05D005851 2.9e-30 136.0 205 41.5
AUR62031415 Chenopodium quinoa HOM05D002575 ORTHO05D005851 2.9e-30 136.0 216 42.6
Migut.D01221 Erythranthe guttata HOM05D002575 ORTHO05D005851 2.9e-30 136.0 224 42.4
FAN13G2332 Fragaria x ananassa HOM05D002575 ORTHO05D005851 4.9e-30 135.2 237 40.5
A08p34150 Brassica napus HOM05D002575 ORTHO05D005851 6.4e-30 134.8 205 43.4
BraA08t35327Z Brassica rapa HOM05D002575 ORTHO05D005851 6.4e-30 134.8 205 43.4
Medtr6g071140 Medicago truncatula HOM05D002575 ORTHO05D005851 6.4e-30 134.8 210 42.4
RcHm_v2.0_Chr7g0178011 Rosa chinensis HOM05D002575 ORTHO05D005851 6.4e-30 134.8 225 43.1
C08p13440 Brassica napus HOM05D002575 ORTHO05D005851 8.4e-30 134.4 205 43.4
BolC8t48974H Brassica oleracea HOM05D002575 ORTHO05D005851 8.4e-30 134.4 205 43.4
FAN08G0580 Fragaria x ananassa HOM05D002575 ORTHO05D005851 8.4e-30 134.4 240 41.7
BcaC07g38555 Brassica carinata HOM05D002575 ORTHO05D005851 1.1e-29 134.0 193 45.6
A06p06820 Brassica napus HOM05D002575 ORTHO05D005851 1.4e-29 133.7 203 45.8
BraA06t23896Z Brassica rapa HOM05D002575 ORTHO05D005851 1.4e-29 133.7 203 45.8
MELO3C002148.2 Cucumis melo HOM05D002575 ORTHO05D005851 1.4e-29 133.7 215 42.3
Eucgr.H00552 Eucalyptus grandis HOM05D002575 ORTHO05D005851 2.4e-29 132.9 216 41.7
Sc09g0000650 Simmondsia chinensis HOM05D002575 ORTHO05D005851 2.4e-29 132.9 198 43.9
Ah.13g069130 Amaranthus hybridus HOM05D002575 ORTHO05D005851 3.2e-29 132.5 206 43.2
Ca_17175_v3 Cicer arietinum L. HOM05D002575 ORTHO05D005851 3.2e-29 132.5 217 43.3
FvH4_5g17660 Fragaria vesca HOM05D002575 ORTHO05D005851 3.2e-29 132.5 240 41.2
AUR62021131 Chenopodium quinoa HOM05D002575 ORTHO05D005851 7.1e-29 131.3 216 43.1
CsaV3_1G007320 Cucumis sativus L. HOM05D002575 ORTHO05D005851 7.1e-29 131.3 216 41.2
BcaC05g24802 Brassica carinata HOM05D002575 ORTHO05D005851 9.3e-29 131.0 205 42.0
FAN04G2427 Fragaria x ananassa HOM05D002575 ORTHO05D005851 9.3e-29 131.0 240 41.2
Gohir.A09G049800 Gossypium hirsutum HOM05D002575 ORTHO05D005851 9.3e-29 131.0 208 43.3
Gorai.006G058600 Gossypium raimondii HOM05D002575 ORTHO05D005851 9.3e-29 131.0 208 43.3
Psat7g000840 Pisum sativum HOM05D002575 ORTHO05D005851 9.3e-29 131.0 201 41.3
Sp1g08800 Schrenkiella parvula HOM05D002575 ORTHO05D005851 9.3e-29 131.0 205 42.9
Ah.07g206610 Amaranthus hybridus HOM05D002575 ORTHO05D005851 1.2e-28 130.6 216 41.7
Gohir.D09G051100 Gossypium hirsutum HOM05D002575 ORTHO05D005851 1.2e-28 130.6 208 43.3
Aa31LG9G16040 Aethionema arabicum HOM05D002575 ORTHO05D005851 1.6e-28 130.2 205 41.0
BolC5t29581H Brassica oleracea HOM05D002575 ORTHO05D005851 1.6e-28 130.2 203 44.8
ClCG04G010460 Citrullus lanatus HOM05D002575 ORTHO05D005851 2.1e-28 129.8 217 40.1
Glyma.08G055900 Glycine max HOM05D002575 ORTHO05D005851 2.1e-28 129.8 217 42.4
BcaC05g24806 Brassica carinata HOM05D002575 ORTHO05D005851 2.7e-28 129.4 205 45.9
Aqoxy3G02495 Aquilegia oxysepala HOM05D002575 ORTHO05D005851 3.5e-28 129.0 211 41.7
Thhalv10006708m.g Eutrema salsugineum HOM05D002575 ORTHO05D005851 3.5e-28 129.0 196 44.4
arahy.Tifrunner.gnm1.ann1.TQ1MU5 Arachis hypogaea HOM05D002575 ORTHO05D005851 6.0e-28 128.3 217 40.1
AL1G20860 Arabidopsis lyrata HOM05D002575 ORTHO05D005851 7.9e-28 127.9 205 42.4
C05p08310 Brassica napus HOM05D002575 ORTHO05D005851 7.9e-28 127.9 205 44.4
Phvul.002G331600 Phaseolus vulgaris HOM05D002575 ORTHO05D005851 7.9e-28 127.9 218 41.7
VMungo0251G0922 Vigna mungo HOM05D002575 ORTHO05D005851 1.0e-27 127.5 217 40.1
CARHR010270 Cardamine hirsuta HOM05D002575 ORTHO05D005851 2.3e-27 126.3 200 44.5
Carub.0001s2961 Capsella rubella HOM05D002575 ORTHO05D005851 3.0e-27 125.9 192 41.7
THA.LOC104798618 Tarenaya hassleriana HOM05D002575 ORTHO05D005851 6.7e-27 124.8 195 42.1
Medtr4g027040 Medicago truncatula HOM05D002575 ORTHO05D005851 8.7e-27 124.4 214 43.9
CARHR030690 Cardamine hirsuta HOM05D002575 ORTHO05D005851 1.5e-26 123.6 190 42.6
Ca_25356_v3 Cicer arietinum L. HOM05D002575 ORTHO05D005851 1.5e-26 123.6 218 39.4
Carub.0001s0958 Capsella rubella HOM05D002575 ORTHO05D005851 1.9e-26 123.2 205 42.0
Thhalv10006632m.g Eutrema salsugineum HOM05D002575 ORTHO05D005851 2.5e-26 122.9 192 42.2
Os06g0252300 Oryza sativa ssp. japonica HOM05D002575 ORTHO05D005851 3.3e-26 122.5 144 50.7
Ah.10g031020 Amaranthus hybridus HOM05D002575 ORTHO05D005851 5.6e-26 121.7 216 39.8
Eucgr.K02284 Eucalyptus grandis HOM05D002575 ORTHO05D005851 5.6e-26 121.7 190 42.1
Sed0021537 Sechium edule HOM05D002575 ORTHO05D005851 5.6e-26 121.7 220 39.1
SGA_v2.0_scaffold40G15642 Striga asiatica HOM05D002575 ORTHO05D005851 5.6e-26 121.7 81 77.8
AL1G49270 Arabidopsis lyrata HOM05D002575 ORTHO05D005851 7.4e-26 121.3 194 42.3
AT1G10170 Arabidopsis thaliana HOM05D002575 ORTHO05D005851 7.4e-26 121.3 205 41.0
BolC8t52442H Brassica oleracea HOM05D002575 ORTHO05D005851 1.3e-25 120.6 167 47.3
HPP92_020386 Vanilla planifolia HOM05D002575 ORTHO05D005851 1.6e-25 120.2 198 43.9
C08p49100 Brassica napus HOM05D002575 ORTHO05D005851 3.7e-25 119.0 167 46.7
THA.LOC104814365 Tarenaya hassleriana HOM05D002575 ORTHO05D005851 3.7e-25 119.0 199 41.2
Zm00001eb371520 Zea mays HOM05D002575 ORTHO05D005851 3.7e-25 119.0 208 42.8
SEGI_29365 Sequoiadendron giganteum HOM05D002575 ORTHO05D005851 4.8e-25 118.6 197 40.1
Lj4g0001149 Lotus japonicus HOM05D002575 ORTHO05D005851 6.2e-25 118.2 143 51.0
PSO017G5700 Papaver somniferum HOM05D002575 ORTHO05D005851 3.1e-24 115.9 212 40.1
HanXRQChr01g0030921 Helianthus annuus HOM05D002575 ORTHO05D005851 4.0e-24 115.5 114 54.4
HanXRQChr01g0030461 Helianthus annuus HOM05D002575 ORTHO05D005851 5.3e-24 115.2 84 67.9
HanXRQChr01g0030941 Helianthus annuus HOM05D002575 ORTHO05D005851 5.3e-24 115.2 84 67.9
Lsat_1_v5_gn_8_145600 Lactuca sativa HOM05D002575 ORTHO05D005851 5.3e-24 115.2 177 45.8
CSS0048466 Camellia sinensis var. sinensis HOM05D002575 ORTHO05D005851 1.5e-23 113.6 147 47.6
Zm00001eb280780 Zea mays HOM05D002575 ORTHO05D005851 1.5e-23 113.6 175 41.7
CDE11G0366 Ceratophyllum demersum HOM05D002575 ORTHO05D024796 2.6e-23 112.8 185 42.2
PSO478G3706 Papaver somniferum HOM05D002575 ORTHO05D005851 3.4e-23 112.5 212 37.3
BraA09t41859Z Brassica rapa HOM05D002575 ORTHO05D005851 7.6e-23 111.3 188 40.4
Glyma.05G247466 Glycine max HOM05D002575 ORTHO05D005851 1.0e-22 110.9 84 67.9
Sabra15G0028500 Salix brachista HOM05D000154 ORTHO05D005851 8.4e-22 107.8 94 60.6
A09p65160 Brassica napus HOM05D002575 ORTHO05D005851 1.4e-21 107.1 148 45.3
Pp3c25_1050 Physcomitrium patens HOM05D002575 ORTHO05D005851 2.5e-21 106.3 143 44.1
Pp3c25_1058 Physcomitrium patens HOM05D002575 ORTHO05D005851 2.5e-21 106.3 143 44.1
AagrBONN_evm.TU.Sc2ySwM_344.1691 Anthoceros agrestis HOM05D002575 ORTHO05D005851 7.9e-20 101.3 86 60.5
CBR_g24300 Chara braunii HOM05D002575 ORTHO05D005851 3.0e-19 99.4 130 44.6
Mapoly0036s0109 Marchantia polymorpha HOM05D002575 ORTHO05D005851 8.7e-19 97.8 87 60.9
SEGI_07791 Sequoiadendron giganteum HOM05D002575 ORTHO05D005851 7.4e-18 94.7 87 54.0
SMO118G0512 Selaginella moellendorffii HOM05D002575 ORTHO05D005851 2.4e-16 89.7 68 57.4
Actinidia12191 Actinidia chinensis HOM05D002575 ORTHO05D005851 4.5e-15 85.5 79 54.4
SHI07444 Sapria himalayana HOM05D002575 ORTHO05D005851 3.2e-13 79.3 87 47.1
CDE04G1574 Ceratophyllum demersum HOM05D002575 ORTHO05D005851 2.7e-12 76.3 57 64.9
CBR_g19005 Chara braunii HOM05D002575 ORTHO05D005851 1.5e-10 70.5 66 51.5
CAN.G190.4 Capsicum annuum HOM05D002575 ORTHO05D024796 3.1e-08 62.8 51 62.7


User provided reference genes

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