Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G757.2 Capsicum annuum HOM05D000888 ORTHO05D000740 1.5e-49 199.1 95 100.0
CAN.G137.56 Capsicum annuum HOM05D000888 ORTHO05D000740 4.7e-27 124.4 89 66.3
Nitab4.5_0000555g0060 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.8e-26 122.5 83 69.9
Nitab4.5_0012696g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.1e-23 113.2 82 64.6
CAN.G546.36 Capsicum annuum HOM05D000888 ORTHO05D000740 7.0e-23 110.5 77 70.1
Peaxi162Scf00192g01213 Petunia axillaris HOM05D000888 ORTHO05D000740 9.1e-23 110.2 77 68.8
Nitab4.5_0012696g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-22 109.8 78 66.7
CAN.G673.5 Capsicum annuum HOM05D000888 ORTHO05D000740 1.6e-22 109.4 78 69.2
PGSC0003DMG400013589 Solanum tuberosum HOM05D000888 ORTHO05D000740 2.0e-22 109.0 79 67.1
Peaxi162Scf00326g00321 Petunia axillaris HOM05D000888 ORTHO05D000740 1.7e-21 105.9 77 67.5
Nitab4.5_0008877g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.5e-20 102.8 79 67.1
Nitab4.5_0000555g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.5e-20 100.9 78 62.8
Nitab4.5_0003259g0050 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.5e-20 100.9 85 60.0
Nitab4.5_0000555g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-19 99.8 79 63.3
Peaxi162Scf00045g01644 Petunia axillaris HOM05D000180 ORTHO05D000740 2.1e-19 99.0 80 63.8
Solyc08g006483.1 Solanum lycopersicum HOM05D000888 ORTHO05D000740 2.1e-19 99.0 79 65.8
Nitab4.5_0000025g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.3e-18 95.5 78 62.8
Sopen08g002160 Solanum pennellii HOM05D000888 ORTHO05D000740 5.2e-18 94.4 78 57.7
Solyc08g006200.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 6.8e-18 94.0 78 57.7
CAN.G950.1 Capsicum annuum HOM05D000888 ORTHO05D000740 1.2e-17 93.2 77 58.4
PGSC0003DMG400043722 Solanum tuberosum HOM05D000888 ORTHO05D000740 1.2e-17 93.2 80 58.8
CAN.G1238.29 Capsicum annuum HOM05D000888 ORTHO05D000740 2.0e-17 92.4 77 57.1
Sopen08g002220 Solanum pennellii HOM05D000888 ORTHO05D000740 2.0e-17 92.4 80 55.0
PGSC0003DMG402009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 2.0e-17 92.4 77 59.7
CAN.G137.58 Capsicum annuum HOM05D000888 ORTHO05D000740 2.6e-17 92.0 77 55.8
Nitab4.5_0000555g0080 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.4e-17 91.7 80 57.5
Peaxi162Scf00045g01638 Petunia axillaris HOM05D000888 ORTHO05D000740 3.4e-17 91.7 78 56.4
Sopen08g002250 Solanum pennellii HOM05D000888 ORTHO05D000740 5.7e-17 90.9 79 55.7
Nitab4.5_0007342g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.5e-17 90.5 79 58.2
Nitab4.5_0012696g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.5e-17 90.5 77 51.9
Solyc08g006270.1 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.3e-16 89.7 79 54.4
Nitab4.5_0000555g0110 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.7e-16 89.4 77 58.4
Nitab4.5_0013923g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.7e-16 89.4 77 58.4
Solyc08g006240.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.7e-16 89.4 77 57.1
CAN.G757.1 Capsicum annuum HOM05D000888 ORTHO05D000740 4.8e-16 87.8 78 56.4
Nitab4.5_0000025g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.8e-16 87.8 77 54.5
Sopen08g002190 Solanum pennellii HOM05D000888 ORTHO05D000740 8.3e-16 87.0 77 55.8
Nitab4.5_0000025g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.1e-15 86.7 81 51.9
Nitab4.5_0010282g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.1e-15 86.7 77 53.2
Nitab4.5_0008877g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.1e-15 84.7 78 51.3
Peaxi162Scf00045g01642 Petunia axillaris HOM05D000888 ORTHO05D000740 5.4e-15 84.3 80 50.0
PGSC0003DMG401009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 9.1e-15 83.6 84 48.8
Nitab4.5_0000555g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-14 83.2 77 54.5
Nitab4.5_0008877g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-14 83.2 77 53.2
CAN.G1342.9 Capsicum annuum HOM05D000888 ORTHO05D000740 2.0e-14 82.4 63 65.1
Nitab4.5_0010282g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.7e-14 82.0 67 64.2
Sopen08g002170 Solanum pennellii HOM05D000888 ORTHO05D000740 2.7e-14 82.0 84 47.6
Peaxi162Scf00045g01537 Petunia axillaris HOM05D000888 ORTHO05D000740 3.5e-14 81.6 91 48.4
PGSC0003DMG400009538 Solanum tuberosum HOM05D000888 ORTHO05D000740 5.9e-14 80.9 79 50.6
CAN.G757.6 Capsicum annuum HOM05D000888 ORTHO05D000740 1.3e-13 79.7 80 50.0
Peaxi162Scf00205g00721 Petunia axillaris HOM05D000888 ORTHO05D000740 1.3e-13 79.7 77 50.6
Nitab4.5_0008877g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.7e-13 79.3 80 47.5
Peaxi162Scf01636g00008 Petunia axillaris HOM05D000888 ORTHO05D000740 1.9e-12 75.9 74 51.4
CAN.G241.28 Capsicum annuum HOM05D000888 ORTHO05D000740 4.2e-12 74.7 78 48.7
Sopen08g002260 Solanum pennellii HOM05D000888 ORTHO05D000740 5.5e-12 74.3 78 44.9
Peaxi162Scf00346g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 7.2e-12 73.9 74 50.0
Solyc08g006210.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.2e-11 73.2 80 45.0
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 2.1e-11 72.4 78 43.6
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 2.1e-11 72.4 78 43.6
Sopen08g002180 Solanum pennellii HOM05D000888 ORTHO05D000740 2.1e-11 72.4 80 45.0
Nitab4.5_0012583g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.8e-11 72.0 79 46.8
Peaxi162Scf01723g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 4.7e-11 71.2 74 48.6
Thhalv10000028m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.4e-10 69.7 82 41.5
Lsat_1_v5_gn_1_43600 Lactuca sativa HOM05D000888 ORTHO05D000740 1.4e-10 69.7 84 41.7
Peaxi162Scf00192g01414 Petunia axillaris HOM05D000888 ORTHO05D000740 1.4e-10 69.7 77 45.5
Solyc08g006280.2 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.4e-10 69.7 78 43.6
Sopen08g002240 Solanum pennellii HOM05D000888 ORTHO05D000740 1.4e-10 69.7 75 44.0
CAN.G137.57 Capsicum annuum HOM05D000888 ORTHO05D000740 1.8e-10 69.3 77 44.2
CARHR085640 Cardamine hirsuta HOM05D000888 ORTHO05D000740 2.3e-10 68.9 86 36.0
EL10Ac3g05995 Beta vulgaris HOM05D000888 ORTHO05D000740 3.0e-10 68.6 81 43.2
BcaB01g02993 Brassica carinata HOM05D000888 ORTHO05D011624 4.0e-10 68.2 78 42.3
Actinidia06436 Actinidia chinensis HOM05D000888 ORTHO05D000740 6.8e-10 67.4 80 38.8
A05p38200 Brassica napus HOM05D000888 ORTHO05D000740 8.8e-10 67.0 81 37.0
CAN.G137.44 Capsicum annuum HOM05D000888 ORTHO05D000740 8.8e-10 67.0 77 46.8
CAN.G757.4 Capsicum annuum HOM05D000888 ORTHO05D000740 8.8e-10 67.0 78 43.6
HanXRQChr01g0014891 Helianthus annuus HOM05D000888 ORTHO05D000740 8.8e-10 67.0 81 39.5
Thecc.09G009500 Theobroma cacao HOM05D000888 ORTHO05D000740 8.8e-10 67.0 78 35.9
Cc07_g12880 Coffea canephora HOM05D000888 ORTHO05D000740 1.5e-09 66.2 77 40.3
HanXRQChr01g0030511 Helianthus annuus HOM05D000888 ORTHO05D000740 1.5e-09 66.2 90 35.6
Solyc08g006230.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.5e-09 66.2 77 48.1
A03p26970 Brassica napus HOM05D000888 ORTHO05D000740 3.4e-09 65.1 74 41.9
BraA03t11908Z Brassica rapa HOM05D000888 ORTHO05D000740 3.4e-09 65.1 74 41.9
BcaNung07344 Brassica carinata HOM05D000888 ORTHO05D000740 4.4e-09 64.7 81 35.8
Lsat_1_v5_gn_1_43960 Lactuca sativa HOM05D000888 ORTHO05D000740 4.4e-09 64.7 78 42.3
A03p36860 Brassica napus HOM05D000888 ORTHO05D000740 5.7e-09 64.3 81 33.3
BraA03t12849Z Brassica rapa HOM05D000888 ORTHO05D000740 5.7e-09 64.3 81 33.3
CAN.G1632.18 Capsicum annuum HOM05D000888 ORTHO05D000740 5.7e-09 64.3 77 41.6
Thhalv10000579m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.7e-09 64.3 78 38.5
BcaB04g18619 Brassica carinata HOM05D000888 ORTHO05D000740 7.5e-09 63.9 87 32.2
Cc07_g12890 Coffea canephora HOM05D000888 ORTHO05D000740 7.5e-09 63.9 77 40.3
Thhalv10000097m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 7.5e-09 63.9 84 36.9
Lsat_1_v5_gn_1_43540 Lactuca sativa HOM05D000888 ORTHO05D000740 7.5e-09 63.9 78 39.7
A03p27150 Brassica napus HOM05D000888 ORTHO05D011624 9.8e-09 63.5 78 39.7
BolC3t15600H Brassica oleracea HOM05D000888 ORTHO05D011624 1.3e-08 63.2 82 37.8
CSS0028692 Camellia sinensis var. sinensis HOM05D000888 ORTHO05D000740 1.3e-08 63.2 79 38.0
C08p39100 Brassica napus HOM05D000888 ORTHO05D000740 1.7e-08 62.8 83 36.1
BolC8t51482H Brassica oleracea HOM05D000888 ORTHO05D000740 1.7e-08 62.8 83 36.1
CARHR116900 Cardamine hirsuta HOM05D000888 ORTHO05D000740 1.7e-08 62.8 79 35.4
Cc08_g06160 Coffea canephora HOM05D000888 ORTHO05D000740 1.7e-08 62.8 78 41.0
EL10Ac2g02424 Beta vulgaris HOM05D000888 ORTHO05D000740 2.2e-08 62.4 77 35.1
BcaC05g29396 Brassica carinata HOM05D000888 ORTHO05D000740 2.2e-08 62.4 75 36.0
CAN.G1941.1 Capsicum annuum HOM05D000888 ORTHO05D000740 2.2e-08 62.4 77 45.5
C08p39150 Brassica napus HOM05D000888 ORTHO05D002878 2.8e-08 62.0 81 37.0
BolC8t51488H Brassica oleracea HOM05D000888 ORTHO05D002878 2.8e-08 62.0 81 37.0
Sc07g0007340 Simmondsia chinensis HOM05D000888 ORTHO05D000740 2.8e-08 62.0 77 39.0
Carub.0004s0406 Capsella rubella HOM05D000888 ORTHO05D000740 3.7e-08 61.6 87 36.8
Hund12417 Selenicereus undatus HOM05D000888 ORTHO05D000740 3.7e-08 61.6 79 36.7
Hund25584 Selenicereus undatus HOM05D000888 ORTHO05D000740 3.7e-08 61.6 77 33.8
BcaC01g04147 Brassica carinata HOM05D000888 ORTHO05D000740 4.9e-08 61.2 80 33.8
C03p32350 Brassica napus HOM05D000888 ORTHO05D000740 4.9e-08 61.2 75 41.3
C03p44630 Brassica napus HOM05D000888 ORTHO05D000740 4.9e-08 61.2 80 33.8
Carub.0007s0889 Capsella rubella HOM05D000888 ORTHO05D000740 4.9e-08 61.2 83 34.9
AUR62026865 Chenopodium quinoa HOM05D000888 ORTHO05D000740 6.3e-08 60.8 77 32.5
Cc08_g08270 Coffea canephora HOM05D000888 ORTHO05D000740 6.3e-08 60.8 77 37.7
Peaxi162Scf00192g01413 Petunia axillaris HOM05D000888 ORTHO05D000740 6.3e-08 60.8 70 42.9
C03p44660 Brassica napus HOM05D000888 ORTHO05D000740 8.3e-08 60.5 81 32.1
BolC4t26980H Brassica oleracea HOM05D000888 ORTHO05D000740 8.3e-08 60.5 75 37.3
Carub.0007s0893 Capsella rubella HOM05D000888 ORTHO05D000740 8.3e-08 60.5 82 34.1
A05p38210 Brassica napus HOM05D000888 ORTHO05D000740 1.1e-07 60.1 87 32.2
AUR62002338 Chenopodium quinoa HOM05D000888 ORTHO05D000740 1.4e-07 59.7 78 42.3
AUR62037704 Chenopodium quinoa HOM05D000888 ORTHO05D000740 1.4e-07 59.7 78 32.1
BraA05t22613Z Brassica rapa HOM05D000888 ORTHO05D000740 1.8e-07 59.3 87 32.2
Carub.0004s0409 Capsella rubella HOM05D000888 ORTHO05D000740 1.8e-07 59.3 81 37.0
Nitab4.5_0000025g0140 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.8e-07 59.3 76 42.1
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.8e-07 59.3 77 45.5
CARHR239590 Cardamine hirsuta HOM05D000888 ORTHO05D000740 2.4e-07 58.9 75 32.0
AL7G20370 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 3.1e-07 58.5 83 34.9
CARHR117180 Cardamine hirsuta HOM05D000888 ORTHO05D000740 3.1e-07 58.5 81 38.3
Manes.03G005400 Manihot esculenta HOM05D000888 ORTHO05D000740 3.1e-07 58.5 77 37.7
BolC3t15577H Brassica oleracea HOM05D000888 ORTHO05D000740 4.1e-07 58.2 75 40.0
AUR62002339 Chenopodium quinoa HOM05D000888 ORTHO05D000740 4.1e-07 58.2 80 38.8
Sp4g03640 Schrenkiella parvula HOM05D000888 ORTHO05D011624 4.1e-07 58.2 87 29.9
BcaB04g18618 Brassica carinata HOM05D000888 ORTHO05D000740 7.0e-07 57.4 80 32.5
C01p07280 Brassica napus HOM05D000888 ORTHO05D000740 7.0e-07 57.4 83 33.7
BolC1t00717H Brassica oleracea HOM05D000888 ORTHO05D000740 7.0e-07 57.4 83 33.7
BolC3t16728H Brassica oleracea HOM05D000888 ORTHO05D000740 7.0e-07 57.4 81 30.9
BolC5t34364H Brassica oleracea HOM05D000888 ORTHO05D000740 7.0e-07 57.4 90 32.2
Thhalv10000111m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 7.0e-07 57.4 73 34.2
PGSC0003DMG400026314 Solanum tuberosum HOM05D000888 ORTHO05D000740 7.0e-07 57.4 73 41.1
AL4G15540 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 9.2e-07 57.0 74 32.4
AL4G15670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 9.2e-07 57.0 79 31.6
Gohir.A07G034736 Gossypium hirsutum HOM05D000888 ORTHO05D000740 9.2e-07 57.0 79 35.4
Lsat_1_v5_gn_5_32880 Lactuca sativa HOM05D000888 ORTHO05D000740 9.2e-07 57.0 77 37.7
AUR62020296 Chenopodium quinoa HOM05D000888 ORTHO05D000740 1.2e-06 56.6 77 33.8
Cc05_g09350 Coffea canephora HOM05D000888 ORTHO05D000740 1.2e-06 56.6 78 37.2
ECA248G2946 Erigeron canadensis HOM05D000888 ORTHO05D000740 1.2e-06 56.6 85 36.5
Nitab4.5_0006661g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-06 56.6 78 39.7
BcaB06g27991 Brassica carinata HOM05D000888 ORTHO05D000740 1.6e-06 56.2 73 34.2
BcaC05g29398 Brassica carinata HOM05D000888 ORTHO05D000740 1.6e-06 56.2 82 32.9
A03p36850 Brassica napus HOM05D000888 ORTHO05D000740 1.6e-06 56.2 87 29.9
A08p18500 Brassica napus HOM05D000888 ORTHO05D000740 1.6e-06 56.2 75 36.0
C05p57010 Brassica napus HOM05D000888 ORTHO05D000740 1.6e-06 56.2 82 32.9
Solyc08g006190.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.6e-06 56.2 77 36.4
Sopen08g002450 Solanum pennellii HOM05D000301 ORTHO05D000303 1.6e-06 56.2 71 39.4
AT4G31650 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 2.0e-06 55.8 78 37.2
CAN.G241.37 Capsicum annuum HOM05D000888 ORTHO05D000740 2.0e-06 55.8 78 38.5
Thhalv10028050m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.0e-06 55.8 80 32.5
Gohir.D07G038300 Gossypium hirsutum HOM05D000888 ORTHO05D000740 2.0e-06 55.8 76 35.5
Gorai.001G040300 Gossypium raimondii HOM05D000888 ORTHO05D000740 2.7e-06 55.5 76 35.5
AL4G15400 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.5e-06 54.7 81 34.6
CARHR239490 Cardamine hirsuta HOM05D000888 ORTHO05D000740 4.5e-06 54.7 73 32.9
AL4G19670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 5.9e-06 54.3 72 37.5
BcaB06g26671 Brassica carinata HOM05D000888 ORTHO05D000740 5.9e-06 54.3 86 30.2
BcaNung04126 Brassica carinata HOM05D000888 ORTHO05D000740 5.9e-06 54.3 87 34.5
Thhalv10025105m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.9e-06 54.3 79 31.6
Aa31LG2G18670 Aethionema arabicum HOM05D000888 ORTHO05D000740 7.8e-06 53.9 74 33.8
AT2G24690 Arabidopsis thaliana HOM05D000888 ORTHO05D011624 7.8e-06 53.9 74 36.5
A08p18540 Brassica napus HOM05D000888 ORTHO05D000740 7.8e-06 53.9 62 38.7
C04p54310 Brassica napus HOM05D000888 ORTHO05D000740 7.8e-06 53.9 81 32.1
BolC4t26976H Brassica oleracea HOM05D000888 ORTHO05D000740 7.8e-06 53.9 81 32.1
BraA03t15128Z Brassica rapa HOM05D000888 ORTHO05D000740 7.8e-06 53.9 75 32.0
Carub.0004s0411 Capsella rubella HOM05D000888 ORTHO05D011624 7.8e-06 53.9 74 37.8
Carub.0007s0886 Capsella rubella HOM05D000888 ORTHO05D000740 7.8e-06 53.9 75 33.3
CARHR239560 Cardamine hirsuta HOM05D000888 ORTHO05D000740 7.8e-06 53.9 82 34.1


User provided reference genes

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