Gene: Sopen08g002240

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g002240
  • Transcript Identifier Sopen08g002240.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 1059673-1062486 : negative

Gene Family Information

  • ID HOM05D000888
  • #Genes/#Species 675/49
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g002240.1

Descriptions

  • Description transcriptional factor B3 family protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: chloroplast | EXPRESSED IN: ovule, embryo | EXPRESSED DURING: D bilateral stage | CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 | BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT4G31690
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT4G31610
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G00260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24700
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G31690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G31610
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G26680
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G31690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039218 REM family
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
Mapman id Description
35.1 not assigned.annotated