Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G692.4 Capsicum annuum HOM05D000246 ORTHO05D008363 2.7e-94 348.6 167 100.0
CAN.G524.28 Capsicum annuum HOM05D000246 ORTHO05D008363 2.1e-70 269.2 133 97.0
Sopen05g009850 Solanum pennellii HOM05D000246 ORTHO05D008363 1.7e-64 249.6 133 88.7
Nitab4.5_0011772g0040 Nicotiana tabacum HOM05D000246 ORTHO05D008363 3.8e-64 248.4 132 87.9
Nitab4.5_0000240g0090 Nicotiana tabacum HOM05D000246 ORTHO05D008363 2.4e-63 245.7 132 87.1
Solyc05g014690.3 Solanum lycopersicum HOM05D000246 ORTHO05D008363 5.4e-63 244.6 130 87.7
Peaxi162Scf00128g00937 Petunia axillaris HOM05D000246 ORTHO05D008363 7.9e-62 240.7 133 85.0
Lj6C822G18 Lonicera japonica HOM05D000246 ORTHO05D008363 3.2e-47 192.2 148 61.5
Potri.010G056500 Populus trichocarpa HOM05D000246 ORTHO05D008363 2.1e-46 189.5 137 63.5
TWI36G1065 Tripterygium wilfordii HOM05D000246 ORTHO05D008363 2.1e-46 189.5 133 65.4
Oeu041679.1 Olea europaea HOM05D000246 ORTHO05D008363 1.3e-45 186.8 133 65.4
Dinv14802 Davidia involucrata HOM05D000246 ORTHO05D008363 1.8e-45 186.4 133 64.7
Haze_12369 Corylus avellana HOM05D000246 ORTHO05D008363 3.0e-45 185.7 137 62.0
GSVIVG01010342001 Vitis vinifera HOM05D000246 ORTHO05D008363 2.5e-44 182.6 133 63.9
Cfa009315 Carpinus fangiana HOM05D003830 ORTHO05D008363 4.3e-44 181.8 137 60.6
Hma1.2p1_1340F.1_g276770 Hydrangea macrophylla HOM05D000246 ORTHO05D008363 4.3e-44 181.8 132 62.1
QL03p054717 Quercus lobata HOM05D000246 ORTHO05D008363 4.3e-44 181.8 132 62.1
Ciclev10030662m.g Citrus clementina HOM05D000246 ORTHO05D008363 5.7e-44 181.4 133 61.7
ECA234G2532 Erigeron canadensis HOM05D000246 ORTHO05D008363 9.7e-44 180.6 156 58.3
Cc11_g16610 Coffea canephora HOM05D000246 ORTHO05D008363 1.6e-43 179.9 136 63.2
Lj4g0022914 Lotus japonicus HOM05D000246 ORTHO05D008363 2.2e-43 179.5 159 54.7
CSS0031830 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D008363 6.3e-43 177.9 133 61.7
CiPaw.05G115000 Carya illinoinensis HOM05D000246 ORTHO05D008363 6.3e-43 177.9 137 59.1
Atru.chr11.2263 Acer truncatum HOM05D000246 ORTHO05D008363 1.1e-42 177.2 133 60.2
Ca_18064_v3 Cicer arietinum L. HOM05D000246 ORTHO05D008363 1.8e-42 176.4 159 52.8
Glyma.05G145500 Glycine max HOM05D000246 ORTHO05D008363 1.8e-42 176.4 133 60.9
Phvul.002G176000 Phaseolus vulgaris HOM05D000246 ORTHO05D008363 4.1e-42 175.3 159 52.2
TPR.G17092 Trifolium pratense HOM05D000246 ORTHO05D008363 4.1e-42 175.3 151 55.0
Glyma.08G102300 Glycine max HOM05D000246 ORTHO05D008363 6.9e-42 174.5 159 53.5
arahy.Tifrunner.gnm1.ann1.L7S9V2 Arachis hypogaea HOM05D000246 ORTHO05D008363 1.0e-40 170.6 134 61.9
arahy.Tifrunner.gnm1.ann1.ZECH1J Arachis hypogaea HOM05D000246 ORTHO05D008363 1.3e-40 170.2 134 61.9
Medtr8g080160 Medicago truncatula HOM05D000246 ORTHO05D008363 1.3e-40 170.2 156 51.9
Sc04g0005060 Simmondsia chinensis HOM05D000246 ORTHO05D008363 1.7e-40 169.9 154 52.6
Lalb_Chr12g0206361 Lupinus albus HOM05D000246 ORTHO05D008363 2.2e-40 169.5 133 60.2
Duzib251G0641 Durio zibethinus HOM05D000246 ORTHO05D008363 3.8e-40 168.7 131 59.5
DCAR_031182 Daucus carota HOM05D000246 ORTHO05D008363 5.0e-40 168.3 133 61.7
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 5.0e-40 168.3 156 53.8
Aqoxy5G03513 Aquilegia oxysepala HOM05D000246 ORTHO05D008363 6.5e-40 167.9 136 58.8
VMungo0251G2810 Vigna mungo HOM05D000246 ORTHO05D008363 6.5e-40 167.9 156 53.8
Gorai.002G190800 Gossypium raimondii HOM05D000246 ORTHO05D008363 8.5e-40 167.5 131 58.0
MSTRG.7982 Avicennia marina HOM05D000246 ORTHO05D008363 1.1e-39 167.2 133 60.9
Gohir.D01G154200 Gossypium hirsutum HOM05D000246 ORTHO05D008363 1.1e-39 167.2 131 58.0
Manes.13G015900 Manihot esculenta HOM05D000246 ORTHO05D008363 1.1e-39 167.2 133 59.4
Prupe.1G233100 Prunus persica HOM05D000246 ORTHO05D008363 1.1e-39 167.2 133 58.6
Gohir.A01G156200 Gossypium hirsutum HOM05D000246 ORTHO05D008363 1.4e-39 166.8 131 58.8
FAN17G1269 Fragaria x ananassa HOM05D000246 ORTHO05D008363 2.5e-39 166.0 132 58.3
PSO063G0842 Papaver somniferum HOM05D000246 ORTHO05D008363 2.5e-39 166.0 136 57.4
FvH4_4g24310 Fragaria vesca HOM05D000246 ORTHO05D008363 3.2e-39 165.6 133 58.6
Lsat_1_v5_gn_4_2880 Lactuca sativa HOM05D000246 ORTHO05D008363 3.2e-39 165.6 133 54.1
MD16G1111900 Malus domestica HOM05D000246 ORTHO05D008363 3.2e-39 165.6 133 57.1
Thecc.02G274400 Theobroma cacao HOM05D000246 ORTHO05D008363 3.2e-39 165.6 131 56.5
Migut.K00698 Erythranthe guttata HOM05D000246 ORTHO05D008363 5.5e-39 164.9 129 59.7
Nn4g22403 Nelumbo nucifera HOM05D000246 ORTHO05D008363 9.3e-39 164.1 135 57.8
Sed0026556 Sechium edule HOM05D000246 ORTHO05D008363 1.2e-38 163.7 131 57.3
FAN22G1025 Fragaria x ananassa HOM05D000246 ORTHO05D008363 3.6e-38 162.2 127 58.3
FAN07G2267 Fragaria x ananassa HOM05D000246 ORTHO05D008363 6.1e-38 161.4 127 59.1
RcHm_v2.0_Chr4g0431111 Rosa chinensis HOM05D000246 ORTHO05D008363 6.1e-38 161.4 133 58.6
FAN12G3886 Fragaria x ananassa HOM05D000246 ORTHO05D008363 1.0e-37 160.6 127 59.1
PGR102G1013 Punica granatum HOM05D000246 ORTHO05D008363 1.0e-37 160.6 131 56.5
SGA_v2.0_scaffold100G29590 Striga asiatica HOM05D000246 ORTHO05D008363 1.0e-37 160.6 127 57.5
Atru.chr11.2248 Acer truncatum HOM05D000246 ORTHO05D008363 2.3e-37 159.5 133 55.6
ClCG11G013890 Citrullus lanatus HOM05D000246 ORTHO05D008363 3.9e-37 158.7 134 55.2
TAR629G2337 Trochodendron aralioides HOM05D000246 ORTHO05D008363 3.9e-37 158.7 132 56.1
MELO3C011889.2 Cucumis melo HOM05D000246 ORTHO05D008363 5.1e-37 158.3 136 53.7
EL10Ac6g13439 Beta vulgaris HOM05D000246 ORTHO05D008363 1.5e-36 156.8 127 55.9
Actinidia25762 Actinidia chinensis HOM05D000246 ORTHO05D008363 5.7e-36 154.8 118 58.5
ATR0824G260 Amborella trichopoda HOM05D000246 ORTHO05D008363 5.7e-36 154.8 136 55.9
CsaV3_5G030500 Cucumis sativus L. HOM05D000246 ORTHO05D008363 7.4e-36 154.5 136 53.7
PSO782G1321 Papaver somniferum HOM05D000246 ORTHO05D008363 2.2e-35 152.9 136 54.4
Hund25439 Selenicereus undatus HOM05D000246 ORTHO05D008363 3.7e-35 152.1 131 54.2
Os04g0486800 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D008363 4.8e-35 151.8 132 54.5
Zm00001eb425250 Zea mays HOM05D000246 ORTHO05D008363 1.4e-34 150.2 135 51.9
Thhalv10006736m.g Eutrema salsugineum HOM05D000246 ORTHO05D008363 2.6e-33 146.0 131 52.7
vmacro16133 Vaccinium macrocarpon HOM05D000246 ORTHO05D008363 2.6e-33 146.0 112 59.8
BraA07t28944Z Brassica rapa HOM05D000246 ORTHO05D008363 3.4e-33 145.6 131 55.0
A07p11560 Brassica napus HOM05D000246 ORTHO05D008363 4.5e-33 145.2 131 55.0
HPP92_008108 Vanilla planifolia HOM05D000246 ORTHO05D008363 4.5e-33 145.2 133 50.4
BcaB03g13967 Brassica carinata HOM05D000246 ORTHO05D008363 1.0e-32 144.1 131 53.4
BcaC06g35322 Brassica carinata HOM05D000246 ORTHO05D008363 1.0e-32 144.1 131 54.2
C07p17440 Brassica napus HOM05D000246 ORTHO05D008363 1.0e-32 144.1 131 54.2
BolC7t42249H Brassica oleracea HOM05D000246 ORTHO05D008363 1.0e-32 144.1 131 54.2
HPP92_008127 Vanilla planifolia HOM05D000246 ORTHO05D008363 1.3e-32 143.7 133 50.4
HanXRQChr12g0385911 Helianthus annuus HOM05D000246 ORTHO05D008363 1.7e-32 143.3 188 42.6
Sp1g24070 Schrenkiella parvula HOM05D000246 ORTHO05D008363 2.9e-32 142.5 135 50.4
Psat7g079560 Pisum sativum HOM05D000246 ORTHO05D008363 5.0e-32 141.7 130 52.3
Rhsim12G0105200 Rhododendron simsii HOM05D000246 ORTHO05D008363 1.9e-31 139.8 107 59.8
Carub.0001s2633 Capsella rubella HOM05D000246 ORTHO05D008363 3.2e-31 139.0 131 51.9
AT1G27880 Arabidopsis thaliana HOM05D000246 ORTHO05D008363 4.2e-31 138.7 131 51.9
AL1G41360 Arabidopsis lyrata HOM05D000246 ORTHO05D008363 2.1e-30 136.3 131 50.4
AUR62005572 Chenopodium quinoa HOM05D000246 ORTHO05D008363 3.6e-30 135.6 158 46.2
THA.LOC104820520 Tarenaya hassleriana HOM05D000246 ORTHO05D008363 6.1e-30 134.8 133 52.6
AUR62024158 Chenopodium quinoa HOM05D000246 ORTHO05D008363 7.9e-30 134.4 158 45.6
COL.COLO4_23621 Corchorus olitorius HOM05D003830 ORTHO05D004446 1.5e-28 130.2 104 56.7
SHI17940 Sapria himalayana HOM05D000246 ORTHO05D008363 5.7e-28 128.3 114 55.3
Aa31sc262G10 Aethionema arabicum HOM05D000246 ORTHO05D008363 6.9e-26 121.3 132 48.5
SEGI_03362 Sequoiadendron giganteum HOM05D000246 ORTHO05D008363 1.4e-23 113.6 135 43.0
Ah.03g133840 Amaranthus hybridus HOM05D000246 ORTHO05D008363 3.9e-21 105.5 107 49.5
Pp3c11_4840 Physcomitrium patens HOM05D000246 ORTHO05D008363 1.3e-19 100.5 131 42.7
SMO118G0075 Selaginella moellendorffii HOM05D000246 ORTHO05D008363 3.5e-17 92.4 127 40.9
Sabra10G0048600 Salix brachista HOM05D000246 ORTHO05D008363 4.2e-15 85.5 70 52.9
Mapoly0097s0064 Marchantia polymorpha HOM05D000246 ORTHO05D008363 1.2e-14 84.0 156 37.2
Cpa.g.sc43.36 Carica papaya HOM05D000246 ORTHO05D008363 1.8e-10 70.1 56 55.4
Eucgr.B03462 Eucalyptus grandis HOM05D000246 ORTHO05D008363 3.8e-08 62.4 53 49.1


User provided reference genes

Program Settings