Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 7.8e-118 427.2 219 100.0
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 2.0e-73 279.6 207 72.0
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 2.6e-65 252.7 205 66.8
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 1.3e-64 250.4 205 66.8
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 1.4e-63 246.9 205 65.9
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 4.2e-63 245.4 207 65.7
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 9.3e-63 244.2 210 64.8
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.6e-62 243.4 207 65.2
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 4.3e-60 235.3 210 59.0
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 1.3e-59 233.8 203 62.6
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 7.6e-57 224.6 210 59.5
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 2.9e-56 222.6 210 60.0
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 2.9e-56 222.6 207 58.9
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 2.9e-56 222.6 210 59.0
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 6.5e-56 221.5 207 59.9
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 6.5e-56 221.5 210 59.0
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 6.5e-56 221.5 210 60.0
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 8.5e-56 221.1 210 58.1
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.4e-55 220.3 210 58.1
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 1.9e-55 219.9 209 59.3
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.9e-55 219.9 210 57.6
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 1.9e-55 219.9 209 57.9
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 1.9e-55 219.9 210 57.6
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 2.5e-55 219.5 210 58.6
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 3.2e-55 219.2 210 58.1
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 5.5e-55 218.4 225 53.8
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 7.2e-55 218.0 210 57.1
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 9.3e-55 217.6 202 60.4
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 1.6e-54 216.9 202 60.4
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 1.6e-54 216.9 209 57.9
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 2.1e-54 216.5 209 58.4
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 2.1e-54 216.5 196 60.2
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 2.1e-54 216.5 195 61.5
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 6.1e-54 214.9 207 57.5
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 7.9e-54 214.5 210 57.1
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 1.0e-53 214.2 199 58.8
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 1.0e-53 214.2 210 58.6
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 1.3e-53 213.8 207 57.0
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 1.3e-53 213.8 195 60.5
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.8e-53 213.4 210 57.1
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 1.8e-53 213.4 210 57.6
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 2.3e-53 213.0 210 56.7
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 3.9e-53 212.2 210 56.7
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 5.1e-53 211.8 202 57.4
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 5.1e-53 211.8 210 56.7
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 5.1e-53 211.8 210 58.1
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 6.7e-53 211.5 197 58.4
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 6.7e-53 211.5 210 56.7
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 6.7e-53 211.5 210 56.7
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 8.7e-53 211.1 207 56.5
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 8.7e-53 211.1 195 59.5
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 8.7e-53 211.1 210 56.2
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 1.1e-52 210.7 207 58.5
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 1.1e-52 210.7 207 56.5
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 1.5e-52 210.3 208 55.3
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 1.9e-52 209.9 195 60.5
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 2.5e-52 209.5 197 57.4
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 3.3e-52 209.1 209 56.9
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 3.3e-52 209.1 190 62.1
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 3.3e-52 209.1 207 57.5
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 4.3e-52 208.8 207 56.0
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 4.3e-52 208.8 192 59.4
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 5.7e-52 208.4 197 57.4
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 5.7e-52 208.4 210 55.2
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.4e-52 208.0 210 55.7
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 9.7e-52 207.6 207 55.6
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 9.7e-52 207.6 192 59.4
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 9.7e-52 207.6 208 55.3
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.6e-51 206.8 210 55.7
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 1.6e-51 206.8 207 57.5
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 2.8e-51 206.1 207 57.0
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 2.8e-51 206.1 204 57.8
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 4.8e-51 205.3 183 62.8
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 6.3e-51 204.9 192 58.9
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 6.3e-51 204.9 192 58.9
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 6.3e-51 204.9 185 62.7
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 6.3e-51 204.9 209 56.0
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 8.2e-51 204.5 209 54.5
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.1e-50 204.1 188 59.6
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 2.4e-50 203.0 198 55.1
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 3.1e-50 202.6 195 57.4
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 6.9e-50 201.4 198 55.1
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 6.9e-50 201.4 198 55.1
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 6.9e-50 201.4 198 55.1
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 6.9e-50 201.4 198 55.1
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 6.9e-50 201.4 198 55.1
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 9.1e-50 201.1 196 59.2
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 1.2e-49 200.7 209 56.0
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 2.0e-49 199.9 192 56.8
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 1.3e-48 197.2 192 56.8
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 5.0e-48 195.3 182 59.3
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 5.0e-48 195.3 192 55.7
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 5.0e-48 195.3 182 57.7
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 8.5e-48 194.5 193 57.0
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 1.1e-47 194.1 208 54.3
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 1.0e-45 187.6 208 53.4
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 3.3e-44 182.6 176 59.1
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 9.7e-44 181.0 209 51.7
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 4.5e-41 172.2 151 65.6
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 6.5e-40 168.3 187 51.3
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 3.3e-36 156.0 217 45.2
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 3.7e-35 152.5 163 48.5
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 1.0e-32 144.4 165 45.5
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 1.3e-32 144.1 185 43.2
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 5.2e-29 132.1 147 54.4
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 9.1e-26 121.3 132 46.2
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 1.1e-23 114.4 192 40.1
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 1.2e-22 110.9 139 40.3
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 4.0e-21 105.9 183 36.1
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 1.7e-19 100.5 121 50.4
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.2e-16 90.1 128 47.7
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 2.5e-15 86.7 59 72.9


User provided reference genes

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