Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G631.1 Capsicum annuum HOM05D002170 ORTHO05D005003 7.2e-36 153.3 73 100.0
CAN.G546.1 Capsicum annuum HOM05D002170 ORTHO05D005003 3.8e-29 131.0 63 100.0
Solyc03g025280.4 Solanum lycopersicum HOM05D002170 ORTHO05D005003 3.8e-29 131.0 63 100.0
Sopen03g004110 Solanum pennellii HOM05D002170 ORTHO05D005003 3.8e-29 131.0 63 100.0
SalBow4G1870 Salvia bowleyana HOM05D002170 ORTHO05D005003 2.5e-28 128.3 63 96.8
Nitab4.5_0001894g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.2e-28 127.9 63 98.4
Nitab4.5_0005295g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.2e-28 127.9 63 98.4
Peaxi162Scf00227g00611 Petunia axillaris HOM05D002170 ORTHO05D005003 3.2e-28 127.9 63 98.4
DCAR_004512 Daucus carota HOM05D002170 ORTHO05D005003 5.5e-28 127.1 63 96.8
Eucgr.C04040 Eucalyptus grandis HOM05D002170 ORTHO05D005003 5.5e-28 127.1 63 95.2
Lj7A736G82 Lonicera japonica HOM05D002170 ORTHO05D005003 5.5e-28 127.1 63 96.8
Dinv18466 Davidia involucrata HOM05D002170 ORTHO05D005003 7.2e-28 126.7 63 95.2
GSVIVG01035985001 Vitis vinifera HOM05D002170 ORTHO05D005003 7.2e-28 126.7 63 95.2
Oeu021911.1 Olea europaea HOM05D002170 ORTHO05D005003 9.4e-28 126.3 63 96.8
Glyma.16G095500 Glycine max HOM05D002170 ORTHO05D005003 1.2e-27 125.9 63 93.7
Cpa.g.sc148.25 Carica papaya HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
Dinv10283 Davidia involucrata HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
FvH4_2g41230 Fragaria vesca HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
FAN15G1846 Fragaria x ananassa HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
FAN20G1225 Fragaria x ananassa HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
FAN27G0183 Fragaria x ananassa HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
Prupe.1G395500 Prunus persica HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
QL02p018561 Quercus lobata HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
RcHm_v2.0_Chr6g0299281 Rosa chinensis HOM05D002170 ORTHO05D005003 1.6e-27 125.6 63 93.7
Actinidia14137 Actinidia chinensis HOM05D002170 ORTHO05D005003 2.1e-27 125.2 63 92.1
Actinidia23116 Actinidia chinensis HOM05D002170 ORTHO05D005003 3.6e-27 124.4 63 92.1
CiPaw.08G005300 Carya illinoinensis HOM05D002170 ORTHO05D005003 3.6e-27 124.4 63 92.1
Haze_21390 Corylus avellana HOM05D002170 ORTHO05D005003 3.6e-27 124.4 63 92.1
Glyma.08G265300 Glycine max HOM05D002170 ORTHO05D005003 3.6e-27 124.4 63 92.1
Lj4g0016988 Lotus japonicus HOM05D002170 ORTHO05D005003 3.6e-27 124.4 63 92.1
vmacro16501 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 3.6e-27 124.4 63 92.1
Ciclev10007357m.g Citrus clementina HOM05D002170 ORTHO05D005003 4.7e-27 124.0 63 93.7
Cc08_g07300 Coffea canephora HOM05D002170 ORTHO05D005003 4.7e-27 124.0 63 93.7
MBI15_g08396_MAGBIO Magnolia biondii HOM05D002170 ORTHO05D005003 6.1e-27 123.6 63 92.1
Manes.03G007500 Manihot esculenta HOM05D002170 ORTHO05D005003 6.1e-27 123.6 63 92.1
SGA_v2.0_scaffold165G38229 Striga asiatica HOM05D002170 ORTHO05D005003 6.1e-27 123.6 63 93.7
MSTRG.25828 Avicennia marina HOM05D002170 ORTHO05D005003 8.0e-27 123.2 63 92.1
Ca_22544_v3 Cicer arietinum L. HOM05D002170 ORTHO05D005003 8.0e-27 123.2 63 92.1
Medtr8g070490 Medicago truncatula HOM05D002170 ORTHO05D005003 8.0e-27 123.2 63 92.1
Psat1g044520 Pisum sativum HOM05D002170 ORTHO05D005003 8.0e-27 123.2 63 92.1
PGR044G1237 Punica granatum HOM05D002170 ORTHO05D005003 8.0e-27 123.2 63 90.5
TPR.G6144 Trifolium pratense HOM05D002170 ORTHO05D005003 8.0e-27 123.2 63 92.1
Lalb_Chr05g0229031 Lupinus albus HOM05D002170 ORTHO05D005003 1.0e-26 122.9 63 90.5
Potri.006G265700 Populus trichocarpa HOM05D002170 ORTHO05D005003 1.0e-26 122.9 63 93.7
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 1.0e-26 122.9 63 93.7
CiPaw.07G231100 Carya illinoinensis HOM05D002170 ORTHO05D005003 1.4e-26 122.5 63 92.1
Gohir.D08G274700 Gossypium hirsutum HOM05D002170 ORTHO05D005003 1.4e-26 122.5 63 88.9
Gorai.004G293200 Gossypium raimondii HOM05D002170 ORTHO05D005003 1.4e-26 122.5 63 88.9
Potri.018G017200 Populus trichocarpa HOM05D002170 ORTHO05D005003 1.4e-26 122.5 63 92.1
Duzib150G1070 Durio zibethinus HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 88.9
Duzib187G0716 Durio zibethinus HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 88.9
Peaxi162Scf00688g00229 Petunia axillaris HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 92.1
Phvul.003G275100 Phaseolus vulgaris HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 88.9
Thecc.09G014300 Theobroma cacao HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 88.9
TWI63G1817 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 90.5
VMungo0251G1008 Vigna mungo HOM05D002170 ORTHO05D005003 1.8e-26 122.1 63 88.9
Oeu009655.1 Olea europaea HOM05D002170 ORTHO05D005003 2.3e-26 121.7 63 92.1
CSS0015318 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D005003 3.0e-26 121.3 63 90.5
Manes.16G131000 Manihot esculenta HOM05D002170 ORTHO05D005003 4.0e-26 120.9 63 87.3
Nitab4.5_0000748g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 4.0e-26 120.9 63 88.9
Nitab4.5_0001798g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 4.0e-26 120.9 63 88.9
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 6.8e-26 120.2 63 87.3
Gohir.A08G253000 Gossypium hirsutum HOM05D002170 ORTHO05D005003 6.8e-26 120.2 63 87.3
CANSAT11G1789 Cannabis sativa HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 88.9
Lsat_1_v5_gn_5_62020 Lactuca sativa HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 90.5
Nitab4.5_0000927g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 87.3
Rhsim02G0216100 Rhododendron simsii HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 88.9
Sabra06G0208300 Salix brachista HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 92.1
Sed0020863 Sechium edule HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 90.5
Sc07g0003300 Simmondsia chinensis HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 90.5
vmacro11266 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 8.8e-26 119.8 63 88.9
HanXRQChr03g0081441 Helianthus annuus HOM05D002170 ORTHO05D005003 1.2e-25 119.4 63 88.9
HanXRQChr03g0082661 Helianthus annuus HOM05D002170 ORTHO05D005003 1.2e-25 119.4 63 88.9
HanXRQChr13g0412271 Helianthus annuus HOM05D002170 ORTHO05D005003 1.2e-25 119.4 63 88.9
TWI32G0518 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 1.5e-25 119.0 63 87.3
Gohir.A06G109900 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.0e-25 118.6 63 87.3
Gohir.D06G104300 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.0e-25 118.6 63 87.3
Gorai.010G119500 Gossypium raimondii HOM05D002170 ORTHO05D005003 2.0e-25 118.6 63 87.3
PSO063G0760 Papaver somniferum HOM05D002170 ORTHO05D005003 2.0e-25 118.6 63 88.9
PSO782G3858 Papaver somniferum HOM05D002170 ORTHO05D005003 2.0e-25 118.6 63 88.9
ClCG08G013750 Citrullus lanatus HOM05D002170 ORTHO05D005003 2.6e-25 118.2 63 88.9
MELO3C011306.2 Cucumis melo HOM05D002170 ORTHO05D005003 2.6e-25 118.2 63 88.9
CsaV3_2G032530 Cucumis sativus L. HOM05D002170 ORTHO05D005003 2.6e-25 118.2 63 88.9
ECA240G4525 Erigeron canadensis HOM05D002170 ORTHO05D005003 2.6e-25 118.2 63 88.9
Sed0005523 Sechium edule HOM05D002170 ORTHO05D005003 2.6e-25 118.2 63 88.9
Nn2g14023 Nelumbo nucifera HOM05D002170 ORTHO05D005003 4.4e-25 117.5 63 87.3
Nn8g40047 Nelumbo nucifera HOM05D002170 ORTHO05D005003 4.4e-25 117.5 63 87.3
Lalb_Chr09g0334601 Lupinus albus HOM05D002170 ORTHO05D005003 5.7e-25 117.1 63 88.9
Nn2g15151 Nelumbo nucifera HOM05D002170 ORTHO05D005003 5.7e-25 117.1 65 84.6
Aqoxy7G03347 Aquilegia oxysepala HOM05D002170 ORTHO05D005003 9.8e-25 116.3 63 85.7
Aa31LG3G16300 Aethionema arabicum HOM05D002170 ORTHO05D005003 1.3e-24 115.9 63 84.1
Thhalv10003609m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 1.3e-24 115.9 63 84.1
Migut.E01450 Erythranthe guttata HOM05D002170 ORTHO05D005003 1.7e-24 115.5 66 84.8
Carub.0006s2289 Capsella rubella HOM05D002170 ORTHO05D005003 3.7e-24 114.4 63 81.0
MD15G1042300 Malus domestica HOM05D002170 ORTHO05D005003 3.7e-24 114.4 66 86.4
TAR636G2364 Trochodendron aralioides HOM05D002170 ORTHO05D005003 3.7e-24 114.4 63 84.1
Duzib168G2019 Durio zibethinus HOM05D002170 ORTHO05D005003 4.9e-24 114.0 63 82.5
CDE02G0333 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 6.3e-24 113.6 62 88.7
Atru.chr7.2551 Acer truncatum HOM05D002170 ORTHO05D005003 8.3e-24 113.2 66 84.8
CARHR188430 Cardamine hirsuta HOM05D002170 ORTHO05D005003 8.3e-24 113.2 63 81.0
Sp2g22460 Schrenkiella parvula HOM05D002170 ORTHO05D005003 8.3e-24 113.2 63 84.1
ATR0749G037 Amborella trichopoda HOM05D002170 ORTHO05D005003 1.4e-23 112.5 63 82.5
MD08G1054700 Malus domestica HOM05D002170 ORTHO05D005003 1.4e-23 112.5 66 86.4
TAR625G0335 Trochodendron aralioides HOM05D002170 ORTHO05D005003 1.4e-23 112.5 63 85.7
CARHR202490 Cardamine hirsuta HOM05D002170 ORTHO05D005003 1.8e-23 112.1 63 82.5
Sp6g32650 Schrenkiella parvula HOM05D002170 ORTHO05D005003 3.1e-23 111.3 63 81.0
Hund02267 Selenicereus undatus HOM05D002170 ORTHO05D005003 4.1e-23 110.9 63 87.3
Thhalv10012641m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 7.0e-23 110.2 63 79.4
AL6G36690 Arabidopsis lyrata HOM05D002170 ORTHO05D005003 9.1e-23 109.8 64 79.7
AT5G25060 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 9.1e-23 109.8 64 79.7
Lsat_1_v5_gn_7_95160 Lactuca sativa HOM05D003441 ORTHO05D005003 9.1e-23 109.8 62 83.9
EL10Ac7g17340 Beta vulgaris HOM05D002170 ORTHO05D005003 1.2e-22 109.4 63 85.7
BcaB04g19807 Brassica carinata HOM05D002170 ORTHO05D005003 1.2e-22 109.4 64 81.2
BcaNung03197 Brassica carinata HOM05D002170 ORTHO05D005003 1.2e-22 109.4 63 82.5
A09p06320 Brassica napus HOM05D002170 ORTHO05D005003 1.2e-22 109.4 64 81.2
BraA09t36277Z Brassica rapa HOM05D002170 ORTHO05D005003 1.2e-22 109.4 64 81.2
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 1.2e-22 109.4 63 84.1
AUR62040507 Chenopodium quinoa HOM05D002170 ORTHO05D005003 2.7e-22 108.2 63 85.7
AUR62042299 Chenopodium quinoa HOM05D002170 ORTHO05D005003 2.7e-22 108.2 63 85.7
BcaC04g23569 Brassica carinata HOM05D002170 ORTHO05D005003 3.5e-22 107.8 63 81.0
BolC9t53617H Brassica oleracea HOM05D002170 ORTHO05D005003 3.5e-22 107.8 63 81.0
Lsat_1_v5_gn_1_103221 Lactuca sativa HOM05D002170 ORTHO05D005003 4.5e-22 107.5 62 82.3
AT5G10800 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 1.0e-21 106.3 63 79.4
Zm00001eb233960 Zea mays HOM05D002170 ORTHO05D005003 1.7e-21 105.5 65 80.0
Zm00001eb234030 Zea mays HOM05D002170 ORTHO05D005003 1.7e-21 105.5 65 80.0
Lsat_1_v5_gn_5_113600 Lactuca sativa HOM05D002170 ORTHO05D005003 1.5e-20 102.4 62 82.3
SEGI_31632 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 1.9e-20 102.1 63 74.6
Pp3c23_11510 Physcomitrium patens HOM05D002170 ORTHO05D005003 2.5e-20 101.7 66 72.7
Pp3c24_10060 Physcomitrium patens HOM05D002170 ORTHO05D005003 5.5e-20 100.5 66 71.2
Ah.15g090090 Amaranthus hybridus HOM05D002170 ORTHO05D005003 9.5e-20 99.8 63 81.0
AagrBONN_evm.TU.Sc2ySwM_117.2284 Anthoceros agrestis HOM05D002170 ORTHO05D005003 1.5e-17 92.4 64 67.2
Mapoly0144s0002 Marchantia polymorpha HOM05D002170 ORTHO05D005003 2.6e-17 91.7 71 64.8
SMO347G0495 Selaginella moellendorffii HOM05D002170 ORTHO05D005003 7.5e-17 90.1 63 66.7
Pp3c24_10090 Physcomitrium patens HOM05D002170 ORTHO05D005003 1.7e-13 79.0 62 59.7
Os02g0179900 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D005003 2.9e-13 78.2 38 86.8
CBR_g26149 Chara braunii HOM05D002170 ORTHO05D005003 1.9e-12 75.5 56 66.1
Ah.01g016890 Amaranthus hybridus HOM05D002170 ORTHO05D005003 9.5e-12 73.2 63 66.7


User provided reference genes

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