Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 5.1e-196 687.6 349 100.0
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 1.0e-127 460.7 254 92.1
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 9.8e-115 417.5 230 92.6
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 1.3e-114 417.2 230 92.6
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 9.2e-113 411.0 230 92.2
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 8.6e-95 351.3 230 76.1
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 1.1e-94 350.9 230 75.7
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 1.6e-93 347.1 236 75.8
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 8.1e-93 344.7 231 74.5
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.8e-92 343.6 225 76.4
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 2.3e-92 343.2 232 73.7
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.1e-92 342.8 230 75.2
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 2.9e-90 336.3 230 75.2
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 2.9e-90 336.3 241 71.8
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 4.9e-90 335.5 230 74.8
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 1.4e-89 334.0 230 73.9
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.6e-88 330.5 230 73.0
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 2.7e-88 329.7 233 72.5
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 2.7e-88 329.7 243 70.0
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 3.5e-88 329.3 243 70.4
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 6.0e-88 328.6 260 66.5
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.0e-87 327.8 237 70.0
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 1.0e-87 327.8 239 70.7
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.3e-87 327.4 241 69.3
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.7e-87 327.0 236 75.8
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 2.3e-87 326.6 280 63.6
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 3.0e-87 326.2 230 71.7
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 3.0e-87 326.2 240 69.6
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 3.0e-87 326.2 227 72.7
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 5.1e-87 325.5 232 70.7
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 5.1e-87 325.5 227 73.6
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 1.1e-86 324.3 241 71.4
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 1.1e-86 324.3 232 70.7
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.5e-86 323.2 231 71.9
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 3.3e-86 322.8 242 70.7
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 3.3e-86 322.8 240 69.6
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 3.3e-86 322.8 226 72.1
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 4.3e-86 322.4 243 70.0
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 5.6e-86 322.0 232 69.4
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 5.6e-86 322.0 252 65.5
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 5.6e-86 322.0 226 72.6
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 7.3e-86 321.6 241 68.9
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 9.6e-86 321.2 232 72.8
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 9.6e-86 321.2 243 69.1
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.6e-85 320.5 241 68.5
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 1.6e-85 320.5 233 69.1
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 1.6e-85 320.5 233 69.1
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 2.1e-85 320.1 242 71.1
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 2.1e-85 320.1 231 71.4
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 4.7e-85 318.9 242 69.0
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 4.7e-85 318.9 242 69.0
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 4.7e-85 318.9 232 70.7
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 4.7e-85 318.9 229 70.7
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 6.2e-85 318.5 238 70.2
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 8.1e-85 318.2 241 69.7
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 8.1e-85 318.2 230 72.6
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.1e-84 317.8 242 69.0
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 1.1e-84 317.8 242 69.0
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 1.4e-84 317.4 244 69.3
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 1.4e-84 317.4 243 69.1
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 1.8e-84 317.0 231 70.6
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.8e-84 317.0 283 60.8
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 2.4e-84 316.6 234 70.1
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.1e-84 316.2 234 69.2
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 5.2e-84 315.5 241 68.5
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 6.9e-84 315.1 240 68.8
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 9.0e-84 314.7 241 68.0
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 9.0e-84 314.7 234 67.1
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 1.2e-83 314.3 227 70.9
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 1.2e-83 314.3 232 70.7
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 1.2e-83 314.3 229 69.9
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.2e-83 314.3 245 68.6
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 2.0e-83 313.5 242 68.6
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.6e-83 313.2 241 68.0
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.6e-83 313.2 241 68.0
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 5.8e-83 312.0 233 68.2
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 7.6e-83 311.6 241 66.8
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 7.6e-83 311.6 232 69.4
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 9.9e-83 311.2 241 66.4
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 1.3e-82 310.8 230 69.6
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 1.7e-82 310.5 228 70.6
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.7e-82 310.5 243 66.7
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.7e-82 310.5 243 66.3
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 2.2e-82 310.1 241 68.5
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.9e-82 309.7 244 68.0
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 4.9e-82 308.9 231 68.8
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-81 307.4 243 65.8
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.4e-81 307.4 243 65.8
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.9e-81 307.0 241 66.4
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 1.9e-81 307.0 231 68.0
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 7.1e-81 305.1 227 68.7
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.6e-80 302.4 241 65.1
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.8e-80 301.6 241 65.1
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 7.8e-80 301.6 241 65.1
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 7.8e-80 301.6 241 64.3
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 7.8e-80 301.6 242 65.3
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 1.7e-79 300.4 241 66.0
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 2.3e-79 300.1 273 59.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 5.1e-79 298.9 388 46.4
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 5.1e-79 298.9 232 67.2
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.1e-78 297.7 241 65.6
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.5e-78 297.4 241 66.0
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 9.6e-78 294.7 241 65.6
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 3.6e-77 292.7 243 63.8
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 3.6e-77 292.7 243 63.8
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 4.8e-77 292.4 243 63.4
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 6.2e-77 292.0 230 66.1
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 6.2e-77 292.0 236 64.8
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 5.3e-76 288.9 230 65.2
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 6.9e-76 288.5 244 63.1
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 1.2e-75 287.7 233 67.4
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 1.5e-75 287.3 244 63.5
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 3.4e-75 286.2 241 65.6
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 5.8e-75 285.4 289 54.7
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 7.6e-75 285.0 241 65.6
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 1.7e-74 283.9 232 64.7
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.7e-74 283.9 162 91.4
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 3.8e-74 282.7 244 62.3
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 3.5e-72 276.2 241 64.3
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 6.0e-72 275.4 226 65.9
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 7.9e-72 275.0 243 60.5
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 1.3e-71 274.2 194 72.7
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.9e-70 270.4 256 58.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 2.5e-70 270.0 232 61.2
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.6e-69 267.3 232 62.9
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 2.8e-69 266.5 232 62.9
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.4e-68 264.2 301 51.2
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 1.5e-67 260.8 234 62.0
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 4.5e-67 259.2 289 52.2
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 7.6e-67 258.5 245 59.2
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 8.4e-66 255.0 244 59.4
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.1e-65 254.6 293 50.9
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 1.6e-64 250.8 227 59.9
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 3.5e-64 249.6 227 59.5
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 3.0e-63 246.5 247 56.3
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 3.0e-63 246.5 200 65.0
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 1.5e-62 244.2 222 61.7
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 1.6e-61 240.7 181 69.1
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.6e-61 240.7 193 65.8
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 2.4e-60 236.9 267 50.6
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 3.1e-60 236.5 199 61.8
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 4.0e-60 236.1 195 62.6
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.9e-50 203.4 135 76.3
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 7.2e-49 198.7 249 45.4
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 3.6e-48 196.4 251 45.8
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 6.1e-48 195.7 125 74.4
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 4.3e-46 189.5 239 47.3
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 6.3e-45 185.7 222 50.0
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.1e-44 183.0 201 52.7
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 9.1e-44 181.8 235 45.5
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.9e-41 174.1 165 61.8
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 2.1e-40 170.6 239 43.5
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 2.3e-39 167.2 133 66.9
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 3.9e-39 166.4 144 59.0
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.5e-38 164.5 115 71.3
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 7.4e-38 162.2 134 62.7
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 1.4e-36 157.9 236 42.8
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 9.1e-36 155.2 137 56.2
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.0e-34 151.8 182 48.4
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 1.7e-34 151.0 131 58.8
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 1.7e-34 151.0 131 58.8
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.4e-33 147.9 138 55.8
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.6e-32 144.4 146 52.7
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 4.7e-32 142.9 162 50.6
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 2.8e-29 133.7 177 46.9
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 1.6e-27 127.9 101 66.3
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.1e-24 117.5 96 60.4
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 4.0e-23 113.2 119 52.9
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 5.2e-23 112.8 75 72.0
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 9.7e-22 108.6 150 48.0
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 9.7e-22 108.6 74 70.3
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.1e-20 105.1 65 76.9
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 5.0e-18 96.3 67 70.1
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 3.2e-17 93.6 74 64.9
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.0e-10 72.0 254 29.1
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 3.8e-10 70.1 44 72.7
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.5e-09 66.2 42 78.6


User provided reference genes

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