Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 5.2e-124 448.0 267 100.0
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.6e-88 330.1 272 69.5
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 6.2e-85 318.2 258 79.8
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 4.3e-78 295.4 235 68.5
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 6.9e-76 288.1 248 69.4
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 6.9e-76 288.1 260 63.5
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.0e-75 286.6 226 68.6
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 2.6e-75 286.2 250 67.6
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 4.9e-74 282.0 239 66.5
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.4e-73 280.4 235 65.5
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 7.1e-73 278.1 234 64.5
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 9.3e-73 277.7 242 63.2
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.2e-72 277.3 232 63.4
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 2.7e-72 276.2 232 67.2
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.5e-72 275.8 258 57.4
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 4.6e-72 275.4 232 63.4
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.0e-72 275.0 241 65.6
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 7.9e-72 274.6 236 73.3
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 8.7e-71 271.2 236 64.8
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.1e-70 270.8 265 61.9
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.5e-70 270.4 232 61.2
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 1.9e-70 270.0 231 63.2
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 2.1e-69 266.5 223 63.2
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 4.8e-69 265.4 240 71.7
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 8.1e-69 264.6 237 61.6
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 1.8e-68 263.5 239 64.4
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 2.4e-68 263.1 232 61.6
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 4.0e-68 262.3 259 62.5
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 5.3e-68 261.9 254 61.4
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 5.3e-68 261.9 254 60.2
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.2e-67 260.8 232 67.2
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.2e-67 260.8 279 57.3
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 7.6e-67 258.1 239 68.2
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 7.6e-67 258.1 223 68.6
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 9.9e-67 257.7 265 60.0
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 9.9e-67 257.7 187 79.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.3e-66 257.3 240 70.0
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 6.4e-66 255.0 270 50.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 1.9e-65 253.4 231 62.3
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.9e-65 253.4 231 70.6
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.9e-65 253.4 265 49.1
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 2.4e-65 253.1 231 61.9
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 2.4e-65 253.1 231 61.9
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 2.4e-65 253.1 231 61.9
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 7.1e-65 251.5 222 66.7
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 9.3e-65 251.1 233 63.1
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 9.3e-65 251.1 235 60.4
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 9.3e-65 251.1 231 60.6
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.2e-64 250.8 231 61.5
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.6e-64 250.4 170 76.5
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 2.7e-64 249.6 237 59.9
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.5e-64 249.2 244 59.4
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 4.6e-64 248.8 258 61.6
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 4.6e-64 248.8 226 69.9
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.3e-63 247.3 225 64.0
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.8e-63 246.9 251 62.2
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 2.5e-62 243.0 165 80.0
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 7.4e-62 241.5 236 50.8
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 9.6e-62 241.1 232 71.6
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 9.6e-62 241.1 225 71.6
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.6e-61 240.4 253 55.3
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 2.8e-61 239.6 254 62.2
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.4e-60 237.3 259 62.2
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 4.0e-60 235.7 241 62.2
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 5.3e-60 235.3 228 62.3
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 6.9e-60 235.0 247 52.2
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 6.9e-60 235.0 227 63.4
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.0e-59 233.4 196 58.7
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.0e-58 231.1 238 62.6
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.3e-58 230.7 211 65.9
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.2e-58 229.9 247 66.0
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.8e-58 229.2 238 57.6
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 8.4e-58 228.0 211 69.7
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 8.4e-58 228.0 226 62.8
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.4e-57 227.3 222 65.3
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 2.1e-56 223.4 241 59.3
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 3.5e-56 222.6 222 63.1
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 3.5e-56 222.6 222 63.1
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.9e-56 221.5 244 54.1
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.9e-56 221.5 245 55.5
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 5.1e-55 218.8 245 65.3
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.1e-54 217.6 222 61.7
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 2.5e-54 216.5 258 53.9
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 4.8e-53 212.2 230 60.0
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 8.2e-53 211.5 179 65.9
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.4e-52 210.7 226 66.8
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 5.3e-52 208.8 226 65.5
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 2.0e-51 206.8 228 51.8
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.5e-51 205.7 275 46.9
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.0e-50 204.5 277 53.8
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 2.5e-49 199.9 223 60.5
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 5.5e-49 198.7 194 53.6
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.6e-48 197.2 157 70.1
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 6.1e-48 195.3 229 58.5
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 4.3e-46 189.1 233 51.5
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 6.3e-45 185.3 214 64.0
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 6.3e-45 185.3 214 64.0
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.4e-44 184.1 243 52.3
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 4.1e-44 182.6 257 44.4
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.0e-42 177.9 276 55.4
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.1e-41 174.5 168 54.2
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.9e-41 173.7 189 55.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 2.5e-41 173.3 232 53.4
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 2.0e-38 163.7 169 49.7
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.8e-36 157.1 122 59.0
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.2e-35 154.5 127 71.7
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 7.7e-35 151.8 230 54.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 7.9e-32 141.7 144 50.7
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 1.5e-30 137.5 211 53.6
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 4.8e-29 132.5 131 50.4
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 7.0e-28 128.6 106 67.9
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.5e-27 126.3 233 40.3
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.1e-22 111.3 107 63.6
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.5e-17 93.6 219 40.2
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 4.7e-16 89.4 103 57.3
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.0e-11 73.9 43 76.7
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 3.5e-11 73.2 91 42.9
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.0e-07 61.6 166 27.1
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 1.2e-06 58.2 70 41.4
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 5.7e-06 55.8 38 60.5


User provided reference genes

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