Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G395.30 Capsicum annuum HOM05D003367 ORTHO05D017691 1.1e-43 179.5 88 100.0
CAN.G843.17 Capsicum annuum HOM05D003367 ORTHO05D004284 1.6e-37 159.1 86 90.7
Manes.02G102800 Manihot esculenta HOM05D003367 ORTHO05D004284 3.0e-36 154.8 86 87.2
Nitab4.5_0009266g0050 Nicotiana tabacum HOM05D003367 ORTHO05D004284 6.7e-36 153.7 86 86.0
Peaxi162Scf00256g00031 Petunia axillaris HOM05D003367 ORTHO05D004284 6.7e-36 153.7 86 86.0
COL.COLO4_21932 Corchorus olitorius HOM05D003367 ORTHO05D004284 8.7e-36 153.3 86 84.9
Duzib187G0451 Durio zibethinus HOM05D003367 ORTHO05D004284 8.7e-36 153.3 86 84.9
Gohir.D11G184400 Gossypium hirsutum HOM05D003367 ORTHO05D004284 8.7e-36 153.3 86 84.9
Gorai.007G196100 Gossypium raimondii HOM05D003367 ORTHO05D004284 8.7e-36 153.3 86 84.9
PGSC0003DMG400014178 Solanum tuberosum HOM05D003367 ORTHO05D004284 8.7e-36 153.3 86 87.2
Lj2A466T49 Lonicera japonica HOM05D003367 ORTHO05D004284 1.1e-35 152.9 86 86.0
Lj2A474T35 Lonicera japonica HOM05D003367 ORTHO05D004284 1.1e-35 152.9 86 86.0
Cpa.g.sc6.230 Carica papaya HOM05D003367 ORTHO05D004284 1.9e-35 152.1 86 84.9
Gohir.A11G176600 Gossypium hirsutum HOM05D003367 ORTHO05D004284 1.9e-35 152.1 86 83.7
Atru.chr3.783 Acer truncatum HOM05D003367 ORTHO05D004284 2.5e-35 151.8 86 84.9
Dinv33616 Davidia involucrata HOM05D003367 ORTHO05D004284 2.5e-35 151.8 86 84.9
Nitab4.5_0006764g0050 Nicotiana tabacum HOM05D003367 ORTHO05D004284 2.5e-35 151.8 86 84.9
Hund17160 Selenicereus undatus HOM05D003367 ORTHO05D004284 2.5e-35 151.8 86 83.7
Hund26926 Selenicereus undatus HOM05D003367 ORTHO05D004284 2.5e-35 151.8 86 83.7
Thecc.01G021100 Theobroma cacao HOM05D003367 ORTHO05D004284 2.5e-35 151.8 86 83.7
QL06p033636 Quercus lobata HOM05D003367 ORTHO05D004284 3.3e-35 151.4 85 83.5
Actinidia22991 Actinidia chinensis HOM05D003367 ORTHO05D004284 4.3e-35 151.0 86 82.6
ClCG07G008430 Citrullus lanatus HOM05D003367 ORTHO05D004284 4.3e-35 151.0 86 83.7
Glyma.01G167500 Glycine max HOM05D003367 ORTHO05D004284 4.3e-35 151.0 86 82.6
Solyc02g084210.1 Solanum lycopersicum HOM05D003367 ORTHO05D004284 4.3e-35 151.0 86 84.9
Duzib147G0565 Durio zibethinus HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 83.7
ECA232G0085 Erigeron canadensis HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 83.7
Eucgr.J02407 Eucalyptus grandis HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 83.7
Phvul.002G110300 Phaseolus vulgaris HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 83.7
Potri.007G013900 Populus trichocarpa HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 82.6
Sopen02g028950 Solanum pennellii HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 84.9
PGSC0003DMG400003633 Solanum tuberosum HOM05D003367 ORTHO05D004284 5.6e-35 150.6 86 84.9
Ah.05g168650 Amaranthus hybridus HOM05D003367 ORTHO05D004284 7.4e-35 150.2 86 82.6
Ciclev10025903m.g Citrus clementina HOM05D003367 ORTHO05D004284 7.4e-35 150.2 86 83.7
Hma1.2p1_2281F.1_g318760 Hydrangea macrophylla HOM05D003367 ORTHO05D004284 7.4e-35 150.2 86 84.9
PGR142G3173 Punica granatum HOM05D003367 ORTHO05D004284 7.4e-35 150.2 86 83.7
Aqoxy6G02322 Aquilegia oxysepala HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 84.9
Cfa006958 Carpinus fangiana HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 83.7
Haze_03793 Corylus avellana HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 83.7
MELO3C032603.2 Cucumis melo HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 82.6
CsaV3_4G005740 Cucumis sativus L. HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 82.6
Hma1.2p1_0266F.1_g106820 Hydrangea macrophylla HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 84.9
Lalb_Chr16g0377551 Lupinus albus HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 83.7
Nitab4.5_0005721g0010 Nicotiana tabacum HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 84.9
PSO541G5137 Papaver somniferum HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 83.7
PSO675G4838 Papaver somniferum HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 83.7
Potri.005G116200 Populus trichocarpa HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 82.6
Sed0007406 Sechium edule HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 83.7
Sc23g0004000 Simmondsia chinensis HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 82.6
Solyc03g118270.1 Solanum lycopersicum HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 86.0
Sopen03g037180 Solanum pennellii HOM05D003367 ORTHO05D004284 9.6e-35 149.8 86 86.0
EL10Ac1g00676 Beta vulgaris HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 83.7
CANSAT78G2109 Cannabis sativa HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 83.7
CiPaw.08G133300 Carya illinoinensis HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 82.6
DCAR_017348 Daucus carota HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 84.9
Glyma.11G075700 Glycine max HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 82.6
Manes.01G144700 Manihot esculenta HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 82.6
Nn6g32295 Nelumbo nucifera HOM05D003367 ORTHO05D017691 1.3e-34 149.4 86 82.6
Nitab4.5_0004254g0040 Nicotiana tabacum HOM05D003367 ORTHO05D004284 1.3e-34 149.4 86 83.7
AUR62023322 Chenopodium quinoa HOM05D003367 ORTHO05D004284 1.6e-34 149.1 86 83.7
AUR62038010 Chenopodium quinoa HOM05D003367 ORTHO05D004284 1.6e-34 149.1 86 83.7
MD15G1247100 Malus domestica HOM05D003367 ORTHO05D004284 1.6e-34 149.1 86 83.7
PGR119G0157 Punica granatum HOM05D003367 ORTHO05D004284 1.6e-34 149.1 86 82.6
VMungo1215G0198 Vigna mungo HOM05D003367 ORTHO05D004284 1.6e-34 149.1 86 81.4
FvH4_1g12010 Fragaria vesca HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
FAN19G0129 Fragaria x ananassa HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
FAN26G0117 Fragaria x ananassa HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
FAN28G2312 Fragaria x ananassa HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
Gohir.A12G060200 Gossypium hirsutum HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
HanXRQChr11g0325961 Helianthus annuus HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 82.6
Medtr5g021760 Medicago truncatula HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 82.6
Medtr5g021770 Medicago truncatula HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 82.6
RcHm_v2.0_Chr2g0099631 Rosa chinensis HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
Sabra07G0011300 Salix brachista HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 81.4
TWI09G0379 Tripterygium wilfordii HOM05D003367 ORTHO05D004284 2.1e-34 148.7 86 83.7
Duzib264G0302 Durio zibethinus HOM05D003367 ORTHO05D004284 2.8e-34 148.3 86 81.4
MBI09_g43736_MAGBIO Magnolia biondii HOM05D003367 ORTHO05D004284 2.8e-34 148.3 86 82.6
Nn1g09238 Nelumbo nucifera HOM05D003367 ORTHO05D004284 2.8e-34 148.3 86 81.4
TPR.G2410 Trifolium pratense HOM05D003367 ORTHO05D004284 2.8e-34 148.3 86 81.4
TWI73G0147 Tripterygium wilfordii HOM05D003367 ORTHO05D004284 2.8e-34 148.3 86 83.7
vmacro18421 Vaccinium macrocarpon HOM05D003367 ORTHO05D004284 2.8e-34 148.3 86 82.6
MSTRG.23415 Avicennia marina HOM05D003367 ORTHO05D004284 3.7e-34 147.9 86 81.4
FAN23G1403 Fragaria x ananassa HOM05D003367 ORTHO05D004284 3.7e-34 147.9 86 81.4
MD02G1134100 Malus domestica HOM05D003367 ORTHO05D004284 3.7e-34 147.9 86 82.6
TAR381G0223 Trochodendron aralioides HOM05D003367 ORTHO05D004284 3.7e-34 147.9 86 82.6
SGA_v2.0_scaffold137G35099 Striga asiatica HOM05D003367 ORTHO05D004284 4.8e-34 147.5 86 81.4
TAR628G1446 Trochodendron aralioides HOM05D003367 ORTHO05D004284 4.8e-34 147.5 86 82.6
Ca_24909_v3 Cicer arietinum L. HOM05D003367 ORTHO05D004284 6.2e-34 147.1 86 81.4
Cc07_g10580 Coffea canephora HOM05D003367 ORTHO05D004284 6.2e-34 147.1 86 83.7
Lsat_1_v5_gn_4_149120 Lactuca sativa HOM05D003367 ORTHO05D004284 6.2e-34 147.1 86 82.6
Sabra05G0095200 Salix brachista HOM05D003367 ORTHO05D004284 6.2e-34 147.1 86 81.4
Sc02g0003370 Simmondsia chinensis HOM05D003367 ORTHO05D017691 6.2e-34 147.1 87 81.6
Aa31LG4G19240 Aethionema arabicum HOM05D003367 ORTHO05D004284 8.1e-34 146.7 86 81.4
Peaxi162Scf00083g00083 Petunia axillaris HOM05D003367 ORTHO05D004284 8.1e-34 146.7 86 82.6
Oeu048453.1 Olea europaea HOM05D003367 ORTHO05D004284 1.1e-33 146.4 86 81.4
Thhalv10010458m.g Eutrema salsugineum HOM05D003367 ORTHO05D004284 1.4e-33 146.0 86 80.2
Lalb_Chr05g0212431 Lupinus albus HOM05D003367 ORTHO05D004284 1.4e-33 146.0 86 80.2
AL8G45240 Arabidopsis lyrata HOM05D003367 ORTHO05D004284 1.8e-33 145.6 86 80.2
Rhsim08G0034400 Rhododendron simsii HOM05D003367 ORTHO05D004284 1.8e-33 145.6 86 80.2
A03p48180 Brassica napus HOM05D003367 ORTHO05D004284 2.4e-33 145.2 86 80.2
C07p46210 Brassica napus HOM05D003367 ORTHO05D004284 2.4e-33 145.2 86 80.2
BolC7t45137H Brassica oleracea HOM05D003367 ORTHO05D004284 2.4e-33 145.2 86 80.2
BraA03t13926Z Brassica rapa HOM05D003367 ORTHO05D004284 2.4e-33 145.2 86 80.2
Nn5g29270 Nelumbo nucifera HOM05D003367 ORTHO05D004284 2.4e-33 145.2 86 80.2
Psat2g155320 Pisum sativum HOM05D003367 ORTHO05D004284 2.4e-33 145.2 86 79.1
CSS0016130 Camellia sinensis var. sinensis HOM05D003367 ORTHO05D004284 3.1e-33 144.8 86 81.4
CSS0047804 Camellia sinensis var. sinensis HOM05D003367 ORTHO05D004284 3.1e-33 144.8 86 81.4
unitig_21.g20543 Utricularia gibba HOM05D003367 ORTHO05D004284 3.1e-33 144.8 86 77.9
Carub.0008s2821 Capsella rubella HOM05D003367 ORTHO05D004284 4.0e-33 144.4 86 79.1
BcaC06g33050 Brassica carinata HOM05D003367 ORTHO05D004284 5.3e-33 144.1 86 79.1
CARHR281430 Cardamine hirsuta HOM05D003367 ORTHO05D004284 6.9e-33 143.7 86 77.9
Sp2g30320 Schrenkiella parvula HOM05D003367 ORTHO05D004284 6.9e-33 143.7 86 79.1
AT5G66280 Arabidopsis thaliana HOM05D003367 ORTHO05D004284 9.0e-33 143.3 86 77.9
CAN.G857.17 Capsicum annuum HOM05D003367 ORTHO05D017691 9.0e-33 143.3 117 67.5
Sp5g11050 Schrenkiella parvula HOM05D003367 ORTHO05D004284 9.0e-33 143.3 86 77.9
THA.LOC104826596 Tarenaya hassleriana HOM05D003367 ORTHO05D004284 9.0e-33 143.3 86 79.1
HPP92_002104 Vanilla planifolia HOM05D003367 ORTHO05D004284 9.0e-33 143.3 86 80.2
BcaB01g00545 Brassica carinata HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 79.1
A09p44210 Brassica napus HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 79.1
C08p26430 Brassica napus HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 79.1
BolC8t50260H Brassica oleracea HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 79.1
BraA09t39882Z Brassica rapa HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 79.1
Carub.0005s1756 Capsella rubella HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 77.9
CDE04G2821 Ceratophyllum demersum HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 76.7
CDE05G3324 Ceratophyllum demersum HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 80.2
Prupe.7G166700 Prunus persica HOM05D003367 ORTHO05D004284 1.2e-32 142.9 86 79.1
A01p23590 Brassica napus HOM05D003367 ORTHO05D004284 1.5e-32 142.5 86 76.7
Lj2g0022271 Lotus japonicus HOM05D003367 ORTHO05D004284 1.5e-32 142.5 86 77.9
BcaC09g50085 Brassica carinata HOM05D003367 ORTHO05D004284 2.6e-32 141.7 86 76.7
C01p29280 Brassica napus HOM05D003367 ORTHO05D004284 2.6e-32 141.7 86 76.7
BolC1t02854H Brassica oleracea HOM05D003367 ORTHO05D004284 2.6e-32 141.7 86 76.7
SHI08572 Sapria himalayana HOM05D003367 ORTHO05D004284 2.6e-32 141.7 86 77.9
BcaB07g29667 Brassica carinata HOM05D003367 ORTHO05D004284 3.4e-32 141.4 86 76.7
BolC2t12552H Brassica oleracea HOM05D003367 ORTHO05D004284 3.4e-32 141.4 86 77.9
BcaC03g18421 Brassica carinata HOM05D003367 ORTHO05D004284 4.5e-32 141.0 86 77.9
BcaB02g10035 Brassica carinata HOM05D003367 ORTHO05D004284 5.8e-32 140.6 86 76.7
Migut.H01145 Erythranthe guttata HOM05D003367 ORTHO05D004284 5.8e-32 140.6 86 79.1
A02p44540 Brassica napus HOM05D003367 ORTHO05D004284 7.6e-32 140.2 86 76.7
A07p17560 Brassica napus HOM05D003367 ORTHO05D004284 7.6e-32 140.2 86 76.7
C02p64940 Brassica napus HOM05D003367 ORTHO05D004284 7.6e-32 140.2 86 76.7
BraA02t09370Z Brassica rapa HOM05D003367 ORTHO05D004284 7.6e-32 140.2 86 76.7
BraA07t29476Z Brassica rapa HOM05D003367 ORTHO05D004284 7.6e-32 140.2 86 76.7
Aa31LG1G14780 Aethionema arabicum HOM05D003367 ORTHO05D004284 1.3e-31 139.4 86 74.4
BcaNung04510 Brassica carinata HOM05D003367 ORTHO05D004284 1.7e-31 139.0 85 77.6
AT3G51160 Arabidopsis thaliana HOM05D003367 ORTHO05D004284 2.9e-31 138.3 86 74.4
BcaNung00396 Brassica carinata HOM05D003367 ORTHO05D004284 2.9e-31 138.3 86 74.4
CDE05G2114 Ceratophyllum demersum HOM05D003367 ORTHO05D004284 3.8e-31 137.9 85 76.5
THA.LOC104821321 Tarenaya hassleriana HOM05D003367 ORTHO05D004284 3.8e-31 137.9 86 75.6
Lsat_1_v5_gn_4_152760 Lactuca sativa HOM05D003367 ORTHO05D004284 1.9e-30 135.6 80 81.2
unitig_749.g13597 Utricularia gibba HOM05D003367 ORTHO05D004284 1.9e-30 135.6 86 75.6
ATR0989G001 Amborella trichopoda HOM05D003367 ORTHO05D004284 4.2e-30 134.4 86 76.7
CARHR160760 Cardamine hirsuta HOM05D003367 ORTHO05D004284 1.6e-29 132.5 86 70.9
Os06g0137700 Oryza sativa ssp. japonica HOM05D003367 ORTHO05D004284 3.5e-29 131.3 86 69.8
Zm00001eb270090 Zea mays HOM05D003367 ORTHO05D004284 3.5e-29 131.3 86 70.9
Zm00001eb377770 Zea mays HOM05D003367 ORTHO05D004284 4.6e-29 131.0 86 70.9
AL5G31590 Arabidopsis lyrata HOM05D003367 ORTHO05D004284 6.0e-29 130.6 86 70.9
CDE02G3936 Ceratophyllum demersum HOM05D003367 ORTHO05D004284 1.8e-28 129.0 77 77.9
BraA01t02266Z Brassica rapa HOM05D003367 ORTHO05D004284 3.0e-28 128.3 91 69.2
Pp3c14_6460 Physcomitrium patens HOM05D003367 ORTHO05D004284 8.7e-28 126.7 86 70.9
SEGI_09344 Sequoiadendron giganteum HOM05D003367 ORTHO05D004284 8.7e-28 126.7 86 70.9
Pp3c6_12710 Physcomitrium patens HOM05D003367 ORTHO05D004284 1.5e-27 125.9 86 69.8
AagrBONN_evm.TU.Sc2ySwM_228.4780 Anthoceros agrestis HOM05D003367 ORTHO05D004284 7.4e-27 123.6 86 67.4
Pp3c5_15180 Physcomitrium patens HOM05D003367 ORTHO05D004284 9.6e-27 123.2 86 69.8
SMO146G0088 Selaginella moellendorffii HOM05D003367 ORTHO05D004284 1.8e-25 119.0 86 65.1
Mapoly0096s0039 Marchantia polymorpha HOM05D003367 ORTHO05D004284 2.4e-25 118.6 86 65.1
Mapoly0096s0040 Marchantia polymorpha HOM05D003367 ORTHO05D004284 2.4e-25 118.6 86 66.3
Pp3c17_11890 Physcomitrium patens HOM05D003367 ORTHO05D004284 2.4e-25 118.6 86 66.3
Mapoly0053s0025 Marchantia polymorpha HOM05D003367 ORTHO05D004284 3.1e-25 118.2 86 66.3
Mapoly0040s0032 Marchantia polymorpha HOM05D003367 ORTHO05D004284 6.9e-25 117.1 86 65.1
CBR_g50778 Chara braunii HOM05D003367 ORTHO05D004284 6.5e-23 110.5 80 65.0
CBR_g54109 Chara braunii HOM05D003367 ORTHO05D004284 1.4e-22 109.4 80 63.8
A09p10020 Brassica napus HOM05D003367 ORTHO05D017691 8.7e-20 100.1 87 62.1
GSVIVG01018803001 Vitis vinifera HOM05D003367 ORTHO05D004284 3.3e-19 98.2 57 84.2
C07p25520 Brassica napus HOM05D003367 ORTHO05D004284 9.0e-17 90.1 62 72.6
Dinv40072 Davidia involucrata HOM05D003367 ORTHO05D004284 9.0e-17 90.1 51 84.3
BcaC03g18415 Brassica carinata HOM05D003367 ORTHO05D004284 2.6e-16 88.6 53 73.6
BolC7t43072H Brassica oleracea HOM05D003367 ORTHO05D004284 2.6e-16 88.6 62 71.0
C09p11880 Brassica napus HOM05D003367 ORTHO05D017691 5.9e-16 87.4 83 57.8
Peaxi162Scf00200g00039 Petunia axillaris HOM05D003367 ORTHO05D306151 5.0e-15 84.3 74 55.4
TAR625G1227 Trochodendron aralioides HOM05D003367 ORTHO05D004284 6.1e-13 77.4 49 77.6
CAN.G900.55 Capsicum annuum HOM05D003367 ORTHO05D004284 1.3e-10 69.7 43 76.7


User provided reference genes

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