Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.82 Capsicum annuum HOM05D015980 ORTHO05D115441 1.8e-147 526.2 317 100.0
CAN.G3728.1 Capsicum annuum HOM05D015980 ORTHO05D115695 1.0e-57 228.0 262 57.6
CAN.G352.79 Capsicum annuum HOM05D015980 ORTHO05D115045 2.7e-47 193.4 122 91.0
CAN.G352.81 Capsicum annuum HOM05D000789 ORTHO05D115161 5.4e-19 99.4 66 77.3
CAN.G352.85 Capsicum annuum HOM05D000789 ORTHO05D115775 5.9e-18 95.9 71 70.4
Solyc06g072040.1 Solanum lycopersicum HOM05D000789 ORTHO05D000897 7.3e-16 89.0 136 38.2
Sopen06g028330 Solanum pennellii HOM05D000789 ORTHO05D000897 7.3e-16 89.0 136 38.2
CAN.G352.71 Capsicum annuum HOM05D015980 ORTHO05D114873 1.6e-15 87.8 93 55.9
Solyc03g110860.3 Solanum lycopersicum HOM05D000789 ORTHO05D000897 4.7e-15 86.3 138 37.7
PGSC0003DMG402015259 Solanum tuberosum HOM05D000789 ORTHO05D000897 1.0e-14 85.1 138 37.7
Sopen03g030050 Solanum pennellii HOM05D000789 ORTHO05D000897 1.4e-14 84.7 138 37.0
CAN.G352.69 Capsicum annuum HOM05D015980 ORTHO05D114990 5.2e-14 82.8 97 48.5
Nitab4.5_0000624g0020 Nicotiana tabacum HOM05D000789 ORTHO05D000897 2.6e-13 80.5 140 39.3
Nitab4.5_0003948g0020 Nicotiana tabacum HOM05D000789 ORTHO05D000897 4.4e-13 79.7 131 37.4
Nitab4.5_0001311g0050 Nicotiana tabacum HOM05D000789 ORTHO05D000897 9.8e-13 78.6 140 37.9
Dinv23155 Davidia involucrata HOM05D000789 ORTHO05D000897 1.7e-12 77.8 135 38.5
GSVIVG01008570001 Vitis vinifera HOM05D000789 ORTHO05D000897 2.9e-12 77.0 158 35.4
TWI14G0831 Tripterygium wilfordii HOM05D000789 ORTHO05D000897 3.7e-12 76.6 138 38.4
CAN.G352.67 Capsicum annuum HOM05D000789 ORTHO05D000897 6.4e-12 75.9 135 37.0
CAN.G352.68 Capsicum annuum HOM05D015980 ORTHO05D115690 6.4e-12 75.9 87 64.4
Nitab4.5_0000339g0100 Nicotiana tabacum HOM05D000789 ORTHO05D000897 8.3e-12 75.5 136 37.5
PGSC0003DMG400015177 Solanum tuberosum HOM05D000789 ORTHO05D000897 7.0e-11 72.4 136 46.3
TWI23G0098 Tripterygium wilfordii HOM05D000789 ORTHO05D000897 7.0e-11 72.4 138 37.7
Atru.chr6.1801 Acer truncatum HOM05D000789 ORTHO05D000897 9.2e-11 72.0 140 37.9
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-10 70.9 136 45.6
FvH4_5g08391 Fragaria vesca HOM05D000789 ORTHO05D000897 2.7e-10 70.5 134 36.6
FAN18G4126 Fragaria x ananassa HOM05D000789 ORTHO05D000897 2.7e-10 70.5 134 36.6
Manes.14G050900 Manihot esculenta HOM05D000789 ORTHO05D000897 3.5e-10 70.1 135 37.0
ClCG06G017930 Citrullus lanatus HOM05D000789 ORTHO05D000897 4.6e-10 69.7 134 37.3
FAN08G0116 Fragaria x ananassa HOM05D000789 ORTHO05D000466 7.8e-10 68.9 134 36.6
RcHm_v2.0_Chr7g0190051 Rosa chinensis HOM05D000789 ORTHO05D000897 7.8e-10 68.9 134 35.8
CAN.G65.36 Capsicum annuum HOM05D000789 ORTHO05D000897 1.3e-09 68.2 69 50.7
MELO3C026204.2 Cucumis melo HOM05D000789 ORTHO05D000897 2.3e-09 67.4 134 36.6
CsaV3_1G000520 Cucumis sativus L. HOM05D000789 ORTHO05D000897 2.3e-09 67.4 134 36.6
Peaxi162Scf00089g00023 Petunia axillaris HOM05D000789 ORTHO05D000897 2.3e-09 67.4 147 34.7
MD14G1156400 Malus domestica HOM05D000789 ORTHO05D000897 3.0e-09 67.0 68 54.4
Potri.015G097400 Populus trichocarpa HOM05D000789 ORTHO05D000897 3.0e-09 67.0 131 37.4
MD06G1141200 Malus domestica HOM05D000789 ORTHO05D000897 3.9e-09 66.6 135 36.3
Ciclev10032646m.g Citrus clementina HOM05D000789 ORTHO05D000897 5.0e-09 66.2 70 51.4
TAR629G0626 Trochodendron aralioides HOM05D000789 ORTHO05D000897 5.0e-09 66.2 131 35.1
CARHR157380 Cardamine hirsuta HOM05D000789 ORTHO05D000897 6.6e-09 65.9 67 49.3
Potri.012G098500 Populus trichocarpa HOM05D000789 ORTHO05D000897 6.6e-09 65.9 130 36.2
Sabra15G0118100 Salix brachista HOM05D000789 ORTHO05D000897 6.6e-09 65.9 131 37.4
TAR629G0558 Trochodendron aralioides HOM05D000789 ORTHO05D000897 6.6e-09 65.9 131 34.4
Dinv11181 Davidia involucrata HOM05D000789 ORTHO05D000897 1.1e-08 65.1 135 34.8
Sabra12G0071900 Salix brachista HOM05D000789 ORTHO05D000897 1.1e-08 65.1 131 36.6
CANSAT80G2391 Cannabis sativa HOM05D000789 ORTHO05D000897 1.5e-08 64.7 137 39.4
Gorai.001G058500 Gossypium raimondii HOM05D000789 ORTHO05D000897 1.5e-08 64.7 69 55.1
Prupe.5G150400 Prunus persica HOM05D000789 ORTHO05D000897 1.5e-08 64.7 68 51.5
Actinidia08878 Actinidia chinensis HOM05D000789 ORTHO05D000897 2.5e-08 63.9 67 50.7
Actinidia36811 Actinidia chinensis HOM05D000789 ORTHO05D000897 2.5e-08 63.9 67 50.7
Gohir.D07G055300 Gossypium hirsutum HOM05D000789 ORTHO05D000897 2.5e-08 63.9 69 55.1
Thecc.03G130100 Theobroma cacao HOM05D000789 ORTHO05D000897 2.5e-08 63.9 139 37.4
Hma1.2p1_0014F.1_g009340 Hydrangea macrophylla HOM05D000789 ORTHO05D000897 3.3e-08 63.5 131 35.1
Sed0010355 Sechium edule HOM05D000789 ORTHO05D000897 4.3e-08 63.2 135 33.3
Eucgr.K02714 Eucalyptus grandis HOM05D000789 ORTHO05D000897 5.6e-08 62.8 62 50.0
Manes.06G120200 Manihot esculenta HOM05D000789 ORTHO05D000897 5.6e-08 62.8 135 36.3
AL5G28040 Arabidopsis lyrata HOM05D000789 ORTHO05D000897 9.5e-08 62.0 68 48.5
AT3G48590 Arabidopsis thaliana HOM05D000789 ORTHO05D000897 9.5e-08 62.0 68 48.5
Eucgr.B00106 Eucalyptus grandis HOM05D000789 ORTHO05D000897 9.5e-08 62.0 62 51.6
Solyc03g111450.3 Solanum lycopersicum HOM05D000789 ORTHO05D002065 9.5e-08 62.0 65 50.8
Haze_07147 Corylus avellana HOM05D000789 ORTHO05D000897 1.2e-07 61.6 56 53.6
Duzib068G0355 Durio zibethinus HOM05D000789 ORTHO05D000897 1.2e-07 61.6 67 49.3
Duzib205G0589 Durio zibethinus HOM05D000789 ORTHO05D000897 1.2e-07 61.6 136 34.6
Aa31LG1G18570 Aethionema arabicum HOM05D000789 ORTHO05D000897 2.1e-07 60.8 69 49.3
Carub.0005s1478 Capsella rubella HOM05D000789 ORTHO05D000897 2.1e-07 60.8 68 47.1
Ca_16050_v3 Cicer arietinum L. HOM05D000789 ORTHO05D000897 2.1e-07 60.8 131 34.4
Gohir.1Z049609 Gossypium hirsutum HOM05D000789 ORTHO05D000897 2.1e-07 60.8 69 52.2
Gohir.A07G050801 Gossypium hirsutum HOM05D000789 ORTHO05D000897 2.1e-07 60.8 69 52.2
Oeu018542.1 Olea europaea HOM05D000789 ORTHO05D000897 2.1e-07 60.8 91 39.6
Oeu018544.1 Olea europaea HOM05D000789 ORTHO05D000897 2.1e-07 60.8 91 39.6
TPR.G14225 Trifolium pratense HOM05D000789 ORTHO05D000897 2.1e-07 60.8 56 57.1
MSTRG.9330 Avicennia marina HOM05D000789 ORTHO05D000897 2.8e-07 60.5 146 33.6
Nn3g16442 Nelumbo nucifera HOM05D000789 ORTHO05D000897 2.8e-07 60.5 124 34.7
CARHR277320 Cardamine hirsuta HOM05D000789 ORTHO05D000897 3.6e-07 60.1 69 46.4
Lalb_Chr23g0273601 Lupinus albus HOM05D000789 ORTHO05D000897 3.6e-07 60.1 56 51.8
Sp2g26550 Schrenkiella parvula HOM05D000789 ORTHO05D000897 3.6e-07 60.1 67 46.3
COL.COLO4_28137 Corchorus olitorius HOM05D000789 ORTHO05D000897 4.7e-07 59.7 121 34.7
Duzib084G0605 Durio zibethinus HOM05D000789 ORTHO05D000897 4.7e-07 59.7 56 57.1
Lj1g0008679 Lotus japonicus HOM05D000789 ORTHO05D000897 4.7e-07 59.7 131 35.1
CiPaw.12G043800 Carya illinoinensis HOM05D000789 ORTHO05D000897 6.2e-07 59.3 56 51.8
THA.LOC104821522 Tarenaya hassleriana HOM05D000789 ORTHO05D000897 6.2e-07 59.3 68 51.5
Thhalv10004831m.g Eutrema salsugineum HOM05D000789 ORTHO05D000897 8.0e-07 58.9 67 46.3
Gohir.A12G190000 Gossypium hirsutum HOM05D000789 ORTHO05D000897 8.0e-07 58.9 56 57.1
Gorai.008G206700 Gossypium raimondii HOM05D000789 ORTHO05D000897 8.0e-07 58.9 56 55.4
Psat5g051800 Pisum sativum HOM05D000789 ORTHO05D000897 8.0e-07 58.9 67 49.3
PGR083G1421 Punica granatum HOM05D000789 ORTHO05D000897 8.0e-07 58.9 138 33.3
THA.LOC109115972 Tarenaya hassleriana HOM05D000789 ORTHO05D000897 8.0e-07 58.9 67 49.3
A06p30100 Brassica napus HOM05D000789 ORTHO05D000897 1.1e-06 58.5 68 45.6
BraA06t25961Z Brassica rapa HOM05D000789 ORTHO05D000897 1.1e-06 58.5 68 45.6
Medtr3g099180 Medicago truncatula HOM05D000789 ORTHO05D000897 1.1e-06 58.5 67 47.8
Nn4g22298 Nelumbo nucifera HOM05D000789 ORTHO05D000897 1.1e-06 58.5 135 34.1
Hund02445 Selenicereus undatus HOM05D000789 ORTHO05D000897 1.1e-06 58.5 75 48.0
BolC3t18551H Brassica oleracea HOM05D000789 ORTHO05D000897 1.4e-06 58.2 68 47.1
PSO017G0050 Papaver somniferum HOM05D000789 ORTHO05D000897 1.4e-06 58.2 66 53.0
PSO478G4300 Papaver somniferum HOM05D000789 ORTHO05D000897 1.4e-06 58.2 66 53.0
THA.LOC104818182 Tarenaya hassleriana HOM05D000789 ORTHO05D000897 1.4e-06 58.2 65 49.2
Aa31LG4G17210 Aethionema arabicum HOM05D000789 ORTHO05D000897 1.8e-06 57.8 68 50.0
CAN.G352.77 Capsicum annuum HOM05D015980 ORTHO05D115700 1.8e-06 57.8 85 41.2
Glyma.04G196200 Glycine max HOM05D000789 ORTHO05D000897 1.8e-06 57.8 67 47.8
Glyma.06G169600 Glycine max HOM05D000789 ORTHO05D000897 1.8e-06 57.8 67 47.8
Phvul.009G166000 Phaseolus vulgaris HOM05D000789 ORTHO05D000897 1.8e-06 57.8 67 47.8
SHI08386 Sapria himalayana HOM05D000789 ORTHO05D000897 1.8e-06 57.8 69 50.7
Sed0004647 Sechium edule HOM05D000789 ORTHO05D000897 1.8e-06 57.8 133 32.3
VMungo1309G1342 Vigna mungo HOM05D000789 ORTHO05D000897 1.8e-06 57.8 67 47.8
C03p62970 Brassica napus HOM05D000789 ORTHO05D000897 4.0e-06 56.6 68 44.1
AUR62034836 Chenopodium quinoa HOM05D000789 ORTHO05D000897 4.0e-06 56.6 81 43.2
Gohir.D12G192400 Gossypium hirsutum HOM05D000789 ORTHO05D000897 4.0e-06 56.6 56 55.4
Oeu005001.1 Olea europaea HOM05D000789 ORTHO05D000897 4.0e-06 56.6 68 44.1
TAR622G0989 Trochodendron aralioides HOM05D000789 ORTHO05D000897 4.0e-06 56.6 135 34.1
CAN.G65.47 Capsicum annuum HOM05D000789 ORTHO05D000897 5.2e-06 56.2 67 44.8
Thhalv10010679m.g Eutrema salsugineum HOM05D000789 ORTHO05D000897 5.2e-06 56.2 67 46.3
MBI07_g39452_MAGBIO Magnolia biondii HOM05D000789 ORTHO05D000897 6.8e-06 55.8 56 57.1
Rhsim12G0175400 Rhododendron simsii HOM05D000789 ORTHO05D000897 8.9e-06 55.5 58 55.2


User provided reference genes

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