Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 0.0e+00 1116.3 557 100.0
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 4.0e-296 1020.8 559 91.2
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.4e-293 1012.3 559 90.5
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.5e-293 1010.4 560 90.4
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 1.5e-290 1002.3 559 90.3
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.4e-288 995.7 559 89.8
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 1.8e-288 995.3 559 89.8
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.6e-268 929.1 557 82.2
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 8.8e-267 923.3 562 81.1
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.8e-264 915.6 563 81.0
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 3.7e-257 891.3 558 79.9
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 2.6e-255 885.2 564 78.4
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 2.2e-254 882.1 563 78.2
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.7e-252 875.2 562 78.5
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.0e-251 873.2 557 77.2
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 1.8e-251 872.5 558 76.7
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 4.0e-251 871.3 561 77.0
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 6.8e-251 870.5 561 77.7
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 3.1e-248 861.7 560 77.0
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 4.1e-248 861.3 567 76.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 1.6e-247 859.4 558 76.9
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.6e-247 859.4 562 77.9
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 2.0e-247 859.0 557 77.4
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 4.5e-247 857.8 561 76.5
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 4.5e-247 857.8 560 75.5
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.9e-246 855.1 564 76.6
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 3.8e-246 854.7 558 76.5
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 8.5e-246 853.6 555 76.4
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.5e-245 852.8 560 77.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 3.2e-245 851.7 557 73.4
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 3.2e-245 851.7 565 75.8
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 5.5e-245 850.9 553 75.6
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 4.7e-244 847.8 559 76.2
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 6.1e-244 847.4 559 74.8
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 1.4e-243 846.3 566 75.4
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.4e-243 846.3 555 74.8
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 2.3e-243 845.5 560 76.2
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 4.0e-243 844.7 565 75.0
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.3e-241 839.7 557 73.1
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.1e-240 836.6 570 74.2
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 4.1e-240 834.7 560 74.8
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 5.4e-240 834.3 559 74.1
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 7.0e-240 833.9 560 74.3
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 9.1e-240 833.6 557 74.7
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.7e-239 832.0 559 75.1
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 3.5e-239 831.6 559 75.3
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 5.9e-239 830.9 558 73.3
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.0e-238 830.1 561 74.9
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.8e-238 828.2 560 73.9
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.1e-237 826.6 563 73.4
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.5e-237 826.2 587 71.6
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.5e-237 823.5 560 73.8
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 3.6e-236 821.6 565 74.0
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 6.1e-236 820.8 563 74.1
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.3e-235 818.9 561 73.8
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 3.0e-235 818.5 573 73.5
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.2e-234 816.6 556 71.0
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 3.4e-234 815.1 560 74.1
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 2.2e-233 812.4 557 74.0
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 3.7e-233 811.6 578 70.1
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.3e-233 810.4 561 72.5
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 1.1e-232 810.1 557 73.2
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.4e-232 809.7 557 72.5
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 3.2e-232 808.5 561 73.1
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.2e-231 806.6 552 71.2
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.0e-231 805.8 557 74.1
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.0e-230 803.5 573 71.0
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.1e-229 800.0 554 73.3
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 2.5e-229 798.9 552 70.8
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 5.6e-229 797.7 550 72.9
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 6.1e-228 794.3 557 72.5
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 6.1e-228 794.3 554 73.5
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.4e-227 793.1 550 72.2
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.3e-227 792.3 557 72.0
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 4.0e-227 791.6 568 70.8
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.2e-226 790.0 568 70.8
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 9.8e-226 786.9 565 70.8
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 3.7e-225 785.0 554 71.7
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 3.7e-225 785.0 560 71.6
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.2e-223 780.0 556 71.4
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.7e-223 778.9 556 71.2
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 7.8e-223 777.3 556 71.0
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 1.3e-222 776.5 555 70.6
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 6.6e-222 774.2 555 70.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.0e-214 748.8 558 68.6
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 6.6e-214 747.7 551 70.1
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 1.1e-211 740.3 563 68.6
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.9e-209 731.5 663 59.1
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.7e-206 723.0 557 65.4
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 8.6e-206 720.7 473 76.7
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 2.7e-199 699.1 680 57.8
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.8e-196 689.1 493 66.7
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 3.3e-189 665.6 480 71.0
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 2.0e-186 656.4 558 63.3
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 1.3e-177 627.1 505 61.4
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 5.7e-173 611.7 683 52.1
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 5.3e-155 552.0 378 73.0
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 4.0e-142 509.2 316 76.9
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.0e-121 441.4 349 62.2
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 5.0e-113 412.5 436 50.5
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.1e-112 411.4 349 61.6
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 3.9e-105 386.3 483 45.1
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 6.0e-82 309.3 467 40.5
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 2.1e-74 284.3 235 65.1
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.2e-66 258.5 156 79.5
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 5.1e-65 253.1 183 67.2
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.3e-55 221.9 519 31.4
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.0e-54 215.7 209 56.5
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.0e-54 215.7 209 56.5
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 5.0e-52 209.9 156 64.1
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 8.5e-52 209.1 238 52.9
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 1.1e-43 182.2 144 60.4
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.4e-43 179.1 146 67.1
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.3e-41 174.5 181 51.4
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.7e-28 131.7 129 57.4
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 1.2e-26 125.6 111 56.8
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 1.4e-09 68.9 91 39.6
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 2.4e-06 58.2 79 34.2


User provided reference genes

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