Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 7.1e-113 410.6 207 100.0
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 7.9e-96 354.0 198 89.9
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 1.0e-90 337.0 196 85.2
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 2.9e-90 335.5 199 84.9
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 5.0e-90 334.7 199 84.9
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 1.1e-84 317.0 194 82.5
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 4.7e-80 301.6 188 80.9
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 3.6e-72 275.4 197 67.5
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 8.0e-72 274.2 195 67.2
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 8.0e-72 274.2 197 68.5
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 8.8e-71 270.8 199 65.3
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.7e-69 266.5 209 64.6
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 6.3e-69 264.6 197 66.5
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 1.1e-68 263.8 173 79.8
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 2.4e-68 262.7 197 66.0
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 3.1e-68 262.3 197 64.5
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 5.3e-68 261.5 199 64.3
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 2.6e-67 259.2 214 61.2
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 3.5e-67 258.8 197 65.5
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 4.5e-67 258.5 197 63.5
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 1.0e-66 257.3 195 65.6
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.3e-66 256.9 197 62.9
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.3e-66 256.9 197 64.0
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 1.3e-66 256.9 197 65.5
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 2.2e-66 256.1 195 65.1
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 2.9e-66 255.8 197 62.4
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 2.9e-66 255.8 212 62.3
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 8.5e-66 254.2 197 62.9
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.1e-65 253.8 197 63.5
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 1.1e-65 253.8 198 64.6
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 1.1e-65 253.8 198 61.6
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 1.5e-65 253.4 198 63.1
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 5.5e-65 251.5 195 63.1
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 7.2e-65 251.1 195 63.1
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 3.6e-64 248.8 197 62.4
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 4.7e-64 248.4 197 62.9
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 1.0e-63 247.3 199 60.3
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 1.0e-63 247.3 199 60.3
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 1.0e-63 247.3 198 61.1
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 1.0e-63 247.3 198 61.1
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 1.8e-63 246.5 197 60.9
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.0e-63 245.7 195 63.1
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.0e-63 245.4 195 63.1
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 4.0e-63 245.4 185 67.0
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 8.8e-63 244.2 212 59.9
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 1.2e-62 243.8 197 60.4
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 3.3e-62 242.3 197 60.9
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 3.3e-62 242.3 195 60.5
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 5.7e-62 241.5 197 61.9
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 6.3e-61 238.0 197 59.9
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.1e-60 237.3 153 73.9
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.8e-60 236.5 185 63.2
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 2.4e-60 236.1 204 59.3
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 4.1e-60 235.3 197 58.4
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 5.3e-60 235.0 197 59.4
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 7.0e-60 234.6 197 60.4
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 9.1e-60 234.2 211 56.4
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 9.1e-60 234.2 223 57.4
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 2.0e-59 233.0 197 57.4
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 4.5e-59 231.9 233 53.2
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 5.9e-59 231.5 197 59.9
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 7.7e-59 231.1 197 57.9
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 1.0e-58 230.7 194 59.8
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.0e-58 230.7 197 57.9
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 2.9e-58 229.2 195 59.0
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 2.9e-58 229.2 195 59.0
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 2.9e-58 229.2 194 59.3
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 3.8e-58 228.8 197 57.9
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-57 227.3 195 57.9
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.1e-57 227.3 196 57.7
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 3.2e-57 225.7 197 57.9
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 5.5e-57 224.9 198 56.6
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.6e-56 223.4 197 57.9
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 1.6e-56 223.4 197 57.9
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 6.1e-56 221.5 195 59.0
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 8.0e-56 221.1 197 57.4
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 2.3e-55 219.5 198 54.5
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 8.8e-55 217.6 184 58.7
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 8.8e-55 217.6 198 55.6
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 1.2e-54 217.2 197 55.3
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 1.5e-54 216.9 199 54.3
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.5e-54 216.9 195 56.9
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.5e-54 216.9 198 56.6
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 2.6e-54 216.1 197 55.3
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 5.7e-54 214.9 195 56.4
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 7.5e-54 214.5 181 60.8
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 3.7e-53 212.2 196 57.7
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.3e-50 203.8 178 57.3
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 5.0e-50 201.8 158 63.3
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 7.2e-49 198.0 193 50.8
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 1.2e-48 197.2 193 51.3
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 2.8e-48 196.1 141 66.7
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 2.0e-46 189.9 147 61.2
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 3.4e-46 189.1 119 77.3
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 3.4e-46 189.1 197 52.3
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 1.6e-43 180.3 161 59.0
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 1.6e-43 180.3 170 56.5
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 3.5e-43 179.1 177 52.5
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.7e-42 176.8 183 50.3
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.7e-42 176.8 183 50.3
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 2.3e-42 176.4 148 58.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.9e-42 176.0 179 54.7
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 6.6e-42 174.9 152 57.9
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 8.6e-42 174.5 127 68.5
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.5e-41 173.7 179 54.7
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 2.5e-41 172.9 187 49.7
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 7.3e-41 171.4 210 47.6
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 2.2e-37 159.8 206 44.2
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 3.9e-34 149.1 121 62.0
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 6.2e-32 141.7 119 56.3
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 3.1e-31 139.4 122 53.3
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 3.4e-30 136.0 194 41.8
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 3.4e-30 136.0 105 61.0
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 6.2e-24 115.2 93 57.0
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 1.7e-21 107.1 187 33.7
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 1.4e-20 104.0 190 32.6
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 4.1e-20 102.4 111 44.1
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 1.0e-18 97.8 75 62.7
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.3e-18 97.4 81 56.8
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 4.2e-12 75.9 60 58.3
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 5.1e-10 68.9 43 69.8


User provided reference genes

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