Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G256.24 Capsicum annuum HOM05D000433 ORTHO05D115590 1.3e-138 496.5 279 100.0
Solyc01g087250.3 Solanum lycopersicum HOM05D000433 ORTHO05D000443 7.5e-25 118.6 70 80.0
Sopen01g034300 Solanum pennellii HOM05D000433 ORTHO05D000443 7.5e-25 118.6 70 80.0
CAN.G219.7 Capsicum annuum HOM05D000433 ORTHO05D000443 1.3e-24 117.9 70 78.6
Peaxi162Scf00953g00316 Petunia axillaris HOM05D000433 ORTHO05D000443 8.3e-24 115.2 70 72.9
Sopen01g034310 Solanum pennellii HOM05D000433 ORTHO05D000443 1.1e-23 114.8 70 71.4
Oeu048989.1 Olea europaea HOM05D000433 ORTHO05D000443 2.4e-23 113.6 70 75.7
Solyc01g087260.4 Solanum lycopersicum HOM05D000433 ORTHO05D000443 4.1e-23 112.8 70 70.0
Nitab4.5_0002918g0020 Nicotiana tabacum HOM05D000433 ORTHO05D000443 5.4e-23 112.5 70 70.0
Oeu049497.3 Olea europaea HOM05D000433 ORTHO05D000443 7.0e-23 112.1 70 74.3
CAN.G219.8 Capsicum annuum HOM05D000433 ORTHO05D000443 6.0e-22 109.0 68 70.6
COL.COLO4_04858 Corchorus olitorius HOM05D000433 ORTHO05D000443 7.8e-22 108.6 70 71.4
Thecc.01G410200 Theobroma cacao HOM05D000433 ORTHO05D000443 7.8e-22 108.6 70 70.0
MSTRG.17028 Avicennia marina HOM05D000433 ORTHO05D000443 1.0e-21 108.2 74 66.2
Psat4g148800 Pisum sativum HOM05D000433 ORTHO05D000443 1.0e-21 108.2 74 66.2
Psat4g148840 Pisum sativum HOM05D000433 ORTHO05D000443 1.0e-21 108.2 74 66.2
Zm00001eb402840 Zea mays HOM05D000433 ORTHO05D000443 1.0e-21 108.2 70 70.0
Gohir.A08G054300 Gossypium hirsutum HOM05D000433 ORTHO05D000443 2.3e-21 107.1 70 68.6
Gohir.D08G064000 Gossypium hirsutum HOM05D000433 ORTHO05D000443 2.3e-21 107.1 70 68.6
Gorai.004G066100 Gossypium raimondii HOM05D000433 ORTHO05D000443 2.3e-21 107.1 70 68.6
Manes.10G141300 Manihot esculenta HOM05D000433 ORTHO05D000443 2.3e-21 107.1 70 71.4
AUR62025811 Chenopodium quinoa HOM05D000433 ORTHO05D000443 3.0e-21 106.7 70 68.6
AUR62044218 Chenopodium quinoa HOM05D000433 ORTHO05D000443 3.0e-21 106.7 70 68.6
Hma1.2p1_0184F.1_g081190 Hydrangea macrophylla HOM05D000433 ORTHO05D000443 3.0e-21 106.7 70 71.4
CiPaw.13G005500 Carya illinoinensis HOM05D000433 ORTHO05D000443 3.9e-21 106.3 76 68.4
Sabra09G0044600 Salix brachista HOM05D000433 ORTHO05D000443 3.9e-21 106.3 70 70.0
ATR0605G288 Amborella trichopoda HOM05D000433 ORTHO05D000443 5.0e-21 105.9 70 68.6
AUR62009389 Chenopodium quinoa HOM05D000433 ORTHO05D000443 5.0e-21 105.9 70 68.6
Cc02_g28080 Coffea canephora HOM05D000433 ORTHO05D000443 5.0e-21 105.9 70 68.6
HanXRQChr17g0562991 Helianthus annuus HOM05D000433 ORTHO05D000443 5.0e-21 105.9 70 67.1
Potri.009G060500 Populus trichocarpa HOM05D000433 ORTHO05D000443 5.0e-21 105.9 70 68.6
CSS0036960 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D000443 6.6e-21 105.5 70 71.4
FAN01G0836 Fragaria x ananassa HOM05D000433 ORTHO05D000443 6.6e-21 105.5 76 64.5
FAN01G0975 Fragaria x ananassa HOM05D000433 ORTHO05D000443 6.6e-21 105.5 76 64.5
Potri.001G265400 Populus trichocarpa HOM05D000433 ORTHO05D000443 6.6e-21 105.5 70 68.6
Potri.001G265900 Populus trichocarpa HOM05D000433 ORTHO05D000443 6.6e-21 105.5 70 68.6
SalBow5G2570 Salvia bowleyana HOM05D000433 ORTHO05D000443 6.6e-21 105.5 70 67.1
arahy.Tifrunner.gnm1.ann1.CX54DC Arachis hypogaea HOM05D000433 ORTHO05D000443 8.6e-21 105.1 74 66.2
CSS0012422 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D000443 8.6e-21 105.1 84 64.3
MELO3C023555.2 Cucumis melo HOM05D000433 ORTHO05D000443 8.6e-21 105.1 70 68.6
CsaV3_7G031010 Cucumis sativus L. HOM05D000433 ORTHO05D000443 8.6e-21 105.1 70 68.6
FAN03G3380 Fragaria x ananassa HOM05D000433 ORTHO05D000443 8.6e-21 105.1 76 63.2
FAN10G2567 Fragaria x ananassa HOM05D000433 ORTHO05D000443 8.6e-21 105.1 76 63.2
Zm00001eb057850 Zea mays HOM05D000433 ORTHO05D000443 8.6e-21 105.1 70 67.1
arahy.Tifrunner.gnm1.ann1.GV0PL5 Arachis hypogaea HOM05D000433 ORTHO05D000443 1.1e-20 104.8 74 64.9
CANSAT80G2227 Cannabis sativa HOM05D000433 ORTHO05D000443 1.1e-20 104.8 74 64.9
MD02G1309700 Malus domestica HOM05D000433 ORTHO05D000443 1.1e-20 104.8 74 63.5
QL04p006260 Quercus lobata HOM05D000433 ORTHO05D000443 1.1e-20 104.8 70 67.1
RcHm_v2.0_Chr1g0316311 Rosa chinensis HOM05D000433 ORTHO05D000443 1.1e-20 104.8 76 63.2
Sabra16G0163100 Salix brachista HOM05D000433 ORTHO05D000443 1.1e-20 104.8 70 68.6
TPR.G1878 Trifolium pratense HOM05D000433 ORTHO05D000443 1.1e-20 104.8 74 64.9
Ciclev10031014m.g Citrus clementina HOM05D000433 ORTHO05D000443 1.5e-20 104.4 79 64.6
TAR369G0420 Trochodendron aralioides HOM05D000433 ORTHO05D000443 1.5e-20 104.4 70 70.0
GSVIVG01032103001 Vitis vinifera HOM05D000433 ORTHO05D000443 1.5e-20 104.4 70 70.0
ATR0605G328 Amborella trichopoda HOM05D000433 ORTHO05D000443 1.9e-20 104.0 70 64.3
CiPaw.13G005400 Carya illinoinensis HOM05D000433 ORTHO05D000443 1.9e-20 104.0 74 66.2
Lalb_Chr03g0034111 Lupinus albus HOM05D000433 ORTHO05D000443 1.9e-20 104.0 74 62.2
MD02G1309500 Malus domestica HOM05D000433 ORTHO05D000443 1.9e-20 104.0 69 68.1
HPP92_023574 Vanilla planifolia HOM05D000433 ORTHO05D000443 1.9e-20 104.0 70 67.1
MSTRG.20579 Avicennia marina HOM05D000433 ORTHO05D000443 2.5e-20 103.6 70 67.1
Hma1.2p1_0184F.1_g081210 Hydrangea macrophylla HOM05D000433 ORTHO05D000443 2.5e-20 103.6 70 67.1
QL04p005882 Quercus lobata HOM05D000433 ORTHO05D000443 2.5e-20 103.6 74 64.9
SGA_v2.0_scaffold119G32738 Striga asiatica HOM05D000433 ORTHO05D000443 2.5e-20 103.6 70 67.1
Ca_23892_v3 Cicer arietinum L. HOM05D000433 ORTHO05D000443 3.3e-20 103.2 74 62.2
ECA234G3403 Erigeron canadensis HOM05D000433 ORTHO05D000443 3.3e-20 103.2 70 64.3
Hund14182 Selenicereus undatus HOM05D000433 ORTHO05D000443 3.3e-20 103.2 70 67.1
Eucgr.G03374 Eucalyptus grandis HOM05D000433 ORTHO05D000443 4.3e-20 102.8 70 67.1
Lj7C571T11 Lonicera japonica HOM05D000433 ORTHO05D000443 4.3e-20 102.8 70 65.7
QL04p006235 Quercus lobata HOM05D000433 ORTHO05D000443 4.3e-20 102.8 70 68.6
FAN06G3200 Fragaria x ananassa HOM05D000433 ORTHO05D000443 5.6e-20 102.4 76 61.8
Glyma.13G202200 Glycine max HOM05D000433 ORTHO05D000443 5.6e-20 102.4 74 62.2
MD07G1011500 Malus domestica HOM05D000433 ORTHO05D000443 5.6e-20 102.4 74 62.2
Medtr8g037315 Medicago truncatula HOM05D000433 ORTHO05D000443 5.6e-20 102.4 76 61.8
FvH4_7g01130 Fragaria vesca HOM05D000433 ORTHO05D000443 7.3e-20 102.1 76 61.8
Lsat_1_v5_gn_4_31520 Lactuca sativa HOM05D000433 ORTHO05D000443 7.3e-20 102.1 70 64.3
PSO541G1646 Papaver somniferum HOM05D000433 ORTHO05D000443 7.3e-20 102.1 70 67.1
PSO675G1923 Papaver somniferum HOM05D000433 ORTHO05D000443 7.3e-20 102.1 70 67.1
PGR031G0340 Punica granatum HOM05D000433 ORTHO05D000443 7.3e-20 102.1 69 66.7
QL04p006270 Quercus lobata HOM05D000433 ORTHO05D000443 7.3e-20 102.1 69 66.7
Dinv43438 Davidia involucrata HOM05D000433 ORTHO05D000443 9.5e-20 101.7 70 67.1
Migut.B01292 Erythranthe guttata HOM05D000433 ORTHO05D000443 9.5e-20 101.7 69 71.0
EL10Ac2g04335 Beta vulgaris HOM05D000433 ORTHO05D000443 1.2e-19 101.3 70 65.7
Os12g0640600 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D000443 1.2e-19 101.3 71 69.0
Ciclev10031039m.g Citrus clementina HOM05D000433 ORTHO05D000443 1.6e-19 100.9 70 67.1
Lj3g0009657 Lotus japonicus HOM05D000433 ORTHO05D000443 1.6e-19 100.9 74 58.1
Lalb_Chr19g0132241 Lupinus albus HOM05D000433 ORTHO05D000443 1.6e-19 100.9 74 60.8
Phvul.011G211200 Phaseolus vulgaris HOM05D000433 ORTHO05D000443 1.6e-19 100.9 74 62.2
Potri.001G265600 Populus trichocarpa HOM05D000433 ORTHO05D000443 1.6e-19 100.9 70 67.1
Prupe.2G014700 Prunus persica HOM05D000433 ORTHO05D000443 1.6e-19 100.9 74 60.8
RcHm_v2.0_Chr1g0316181 Rosa chinensis HOM05D000433 ORTHO05D000443 1.6e-19 100.9 76 61.8
Sc14g0005050 Simmondsia chinensis HOM05D000433 ORTHO05D000443 2.1e-19 100.5 70 65.7
Cpa.g.sc125.7 Carica papaya HOM05D000433 ORTHO05D000443 2.8e-19 100.1 70 62.9
Glyma.12G236700 Glycine max HOM05D000433 ORTHO05D000443 2.8e-19 100.1 74 60.8
Oeu007851.1 Olea europaea HOM05D000433 ORTHO05D000443 2.8e-19 100.1 70 65.7
TAR623G0564 Trochodendron aralioides HOM05D000433 ORTHO05D000443 2.8e-19 100.1 70 65.7
Eucgr.G03362 Eucalyptus grandis HOM05D000433 ORTHO05D000443 3.6e-19 99.8 70 65.7
Sed0007420 Sechium edule HOM05D000433 ORTHO05D000443 4.7e-19 99.4 70 64.3
Sed0008090 Sechium edule HOM05D000433 ORTHO05D000443 4.7e-19 99.4 70 64.3
TWI73G0222 Tripterygium wilfordii HOM05D000433 ORTHO05D000443 6.2e-19 99.0 70 65.7
arahy.Tifrunner.gnm1.ann1.8D7DUE Arachis hypogaea HOM05D000433 ORTHO05D000443 8.1e-19 98.6 74 59.5
Rhsim07G0056200 Rhododendron simsii HOM05D000433 ORTHO05D000443 8.1e-19 98.6 68 67.6
VMungo1127G1125 Vigna mungo HOM05D000433 ORTHO05D000443 8.1e-19 98.6 74 59.5
Aqoxy2G00193 Aquilegia oxysepala HOM05D000433 ORTHO05D000443 1.1e-18 98.2 70 65.7
Lalb_Chr20g0107981 Lupinus albus HOM05D000433 ORTHO05D000443 1.1e-18 98.2 74 60.8
Oeu007868.2 Olea europaea HOM05D000433 ORTHO05D000443 1.8e-18 97.4 70 67.1
CAN.G1235.8 Capsicum annuum HOM05D002513 ORTHO05D002720 2.3e-18 97.1 62 74.2
Lj9C633G15 Lonicera japonica HOM05D000433 ORTHO05D000443 3.1e-18 96.7 70 60.0
Duzib268G0366 Durio zibethinus HOM05D000433 ORTHO05D000443 4.0e-18 96.3 71 63.4
Nn2g15315 Nelumbo nucifera HOM05D000433 ORTHO05D000443 4.0e-18 96.3 70 67.1
Rhsim07G0189000 Rhododendron simsii HOM05D000433 ORTHO05D000443 6.8e-18 95.5 70 61.4
THA.LOC104823025 Tarenaya hassleriana HOM05D000433 ORTHO05D000443 1.2e-17 94.7 70 62.9
CANSAT80G0472 Cannabis sativa HOM05D000433 ORTHO05D000443 2.0e-17 94.0 75 58.7
PSO782G2691 Papaver somniferum HOM05D000433 ORTHO05D000443 4.4e-17 92.8 70 60.0
AL5G46380 Arabidopsis lyrata HOM05D000433 ORTHO05D000443 5.8e-17 92.4 74 62.2
PGR004G2078 Punica granatum HOM05D000433 ORTHO05D000443 5.8e-17 92.4 71 63.4
PGR044G1035 Punica granatum HOM05D000433 ORTHO05D000443 9.9e-17 91.7 70 61.4
AT3G63520 Arabidopsis thaliana HOM05D000433 ORTHO05D000443 1.3e-16 91.3 70 64.3
BcaB02g08056 Brassica carinata HOM05D000433 ORTHO05D000443 1.3e-16 91.3 70 65.7
CANSAT80G0704 Cannabis sativa HOM05D000433 ORTHO05D000443 1.7e-16 90.9 76 55.3
CANSAT80G1890 Cannabis sativa HOM05D000433 ORTHO05D000443 1.7e-16 90.9 76 59.2
Carub.0005s3013 Capsella rubella HOM05D000433 ORTHO05D000443 1.7e-16 90.9 70 64.3
CDE10G1079 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 2.9e-16 90.1 70 60.0
DCAR_003216 Daucus carota HOM05D000433 ORTHO05D000443 2.9e-16 90.1 70 61.4
Thhalv10005877m.g Eutrema salsugineum HOM05D000433 ORTHO05D000443 2.9e-16 90.1 70 62.9
HanXRQChr16g0524481 Helianthus annuus HOM05D000433 ORTHO05D000443 2.9e-16 90.1 67 61.2
CANSAT11G0496 Cannabis sativa HOM05D000433 ORTHO05D000443 4.9e-16 89.4 68 63.2
PSO782G5515 Papaver somniferum HOM05D000433 ORTHO05D000443 4.9e-16 89.4 68 55.9
Sp5g00060 Schrenkiella parvula HOM05D000433 ORTHO05D000443 4.9e-16 89.4 70 61.4
Medtr8g037310 Medicago truncatula HOM05D000433 ORTHO05D000443 6.4e-16 89.0 72 56.9
BcaC02g10356 Brassica carinata HOM05D000433 ORTHO05D000443 1.1e-15 88.2 70 62.9
C04p29820 Brassica napus HOM05D000433 ORTHO05D000443 1.1e-15 88.2 70 62.9
PGR004G1132 Punica granatum HOM05D000433 ORTHO05D000443 1.1e-15 88.2 69 60.9
PGR044G0030 Punica granatum HOM05D000433 ORTHO05D000443 1.1e-15 88.2 70 60.0
BolC4t24515H Brassica oleracea HOM05D000433 ORTHO05D000443 1.4e-15 87.8 69 63.8
BraA04t15726Z Brassica rapa HOM05D000433 ORTHO05D000443 1.4e-15 87.8 69 63.8
CARHR291450 Cardamine hirsuta HOM05D000433 ORTHO05D000443 4.1e-15 86.3 70 61.4
PGR044G2631 Punica granatum HOM05D000433 ORTHO05D000443 5.4e-15 85.9 70 60.0
Carub.0002s1722 Capsella rubella HOM05D000433 ORTHO05D000443 7.1e-15 85.5 70 60.0
Atru.chr11.2617 Acer truncatum HOM05D000433 ORTHO05D000443 1.2e-14 84.7 71 60.6
BolC8t51469H Brassica oleracea HOM05D000433 ORTHO05D000443 1.2e-14 84.7 70 55.7
PGR044G0170 Punica granatum HOM05D000433 ORTHO05D000443 3.5e-14 83.2 67 58.2
C08p38960 Brassica napus HOM05D000433 ORTHO05D000443 4.6e-14 82.8 70 54.3
Medtr8g037275 Medicago truncatula HOM05D000433 ORTHO05D000443 6.0e-14 82.4 72 50.0
BcaC07g40898 Brassica carinata HOM05D000433 ORTHO05D000443 1.3e-13 81.3 70 55.7
C08p38950 Brassica napus HOM05D000433 ORTHO05D000443 1.3e-13 81.3 70 55.7
BolC8t51468H Brassica oleracea HOM05D000433 ORTHO05D000443 1.3e-13 81.3 70 55.7
Medtr8g037290 Medicago truncatula HOM05D000433 ORTHO05D000443 1.3e-13 81.3 72 51.4
A09p55970 Brassica napus HOM05D000433 ORTHO05D000443 1.7e-13 80.9 70 54.3
BcaB08g35129 Brassica carinata HOM05D000433 ORTHO05D000443 5.1e-13 79.3 83 50.6
Carub.0002s1723 Capsella rubella HOM05D000433 ORTHO05D000443 6.6e-13 79.0 70 58.6
Mapoly0003s0307 Marchantia polymorpha HOM05D000433 ORTHO05D000443 2.5e-12 77.0 65 55.4
A09p55980 Brassica napus HOM05D000433 ORTHO05D000443 5.6e-12 75.9 74 52.7
GSVIVG01032110001 Vitis vinifera HOM05D000433 ORTHO05D000443 1.2e-11 74.7 53 67.9
Pp3c21_12920 Physcomitrium patens HOM05D000433 ORTHO05D000443 8.1e-11 72.0 69 49.3
Pp3c22_6380 Physcomitrium patens HOM05D000433 ORTHO05D000443 8.1e-11 72.0 66 50.0
Pp3c12_22350 Physcomitrium patens HOM05D000433 ORTHO05D000443 4.4e-09 66.2 71 45.1
CANSAT80G0689 Cannabis sativa HOM05D000433 ORTHO05D000443 7.6e-09 65.5 84 46.4
CAN.G63.10 Capsicum annuum HOM05D000679 ORTHO05D000137 7.6e-09 65.5 39 82.1
BraA09t40999Z Brassica rapa HOM05D000433 ORTHO05D000443 1.3e-08 64.7 62 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1284 Anthoceros agrestis HOM05D000433 ORTHO05D000443 1.7e-08 64.3 67 52.2
SMO004G0032 Selaginella moellendorffii HOM05D000433 ORTHO05D000443 2.2e-08 63.9 69 47.8
CAN.G255.16 Capsicum annuum HOM05D002261 ORTHO05D002334 3.8e-08 63.2 52 65.4
SMO361G0560 Selaginella moellendorffii HOM05D000433 ORTHO05D000443 3.8e-08 63.2 69 46.4


User provided reference genes

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