Gene: AT3G63520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G63520
  • Transcript Identifier AT3G63520.1
  • Gene Type Coding gene
  • Location Chr3 : 23452940-23455896 : positive

Gene Family Information

  • ID HOM05D000433
  • #Genes/#Species 1194/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G63520.1
  • symbol CCD1
  • Alias ATCCD1,CAROTENOID CLEAVAGE DIOXYGENASE 1,ATNCED1,NCED1
  • uniprot O65572

Descriptions

  • Description carotenoid cleavage dioxygenase 1
  • Computational description carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016121
IMP
IBA
Gene Ontologycarotene catabolic process1 2
GO:0016124
IMP
Gene Ontologyxanthophyll catabolic process1
GO:0016118
IDA
Gene Ontologycarotenoid catabolic process3
GO:0009414
IEP
Gene Ontologyresponse to water deprivation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016702
IEA
GOA Databaseoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016702
IEA
InterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0010436
IBA
Gene Ontologycarotenoid dioxygenase activity2
GO:0045549
IDA
Gene Ontology9-cis-epoxycarotenoid dioxygenase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IBA
Gene Ontologychloroplast stroma2
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0005773
IDA
GOA Databasevacuole
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm1
GO:0005829
HDA
Gene Ontologycytosol7
GO:0000325
HDA
Gene Ontologyplant-type vacuole8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004294 Carotenoid oxygenase
Mapman id Description
9.1.6.3.1 Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.class-CCD1 carotenoid cleavage dioxygenase