Gene: Solyc01g087250.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g087250.3
- Transcript Identifier Solyc01g087250.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 74432263-74442497 : negative
Gene Family Information
- ID HOM05D000433
- #Genes/#Species 1194/98
- Phylogenetic origin
- ID ORTHO05D000443
- #Genes/#Species 921/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g087250.3.1
- uniprot Q6E4P5
- gene_id Solyc01g087250
Descriptions
- Description carotenoid cleavage dioxygenase 1A
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT3G63520 |
| GO:0016124 | ISO | PLAZA Integrative Orthology | xanthophyll catabolic process | AT3G63520 |
| GO:0016118 | ISO | PLAZA Integrative Orthology | carotenoid catabolic process | AT3G63520 |
| GO:0016121 | IBA | GOA Database | carotene catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045549 | ISO | PLAZA Integrative Orthology | 9-cis-epoxycarotenoid dioxygenase activity | AT3G63520 |
| GO:0016702 | IEA | GOA Database | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0016702 | IEA | InterPro | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0010436 | IBA | GOA Database | carotenoid dioxygenase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0051213 | IEA | GOA Database | dioxygenase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G63520 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G63520 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G63520 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G63520 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G63520 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G63520 |
| GO:0009570 | IBA | GOA Database | chloroplast stroma |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004294 | Carotenoid oxygenase |
| Mapman id | Description |
|---|---|
| 9.1.6.3.1 | Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.class-CCD1 carotenoid cleavage dioxygenase |