Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 2.2e-169 599.0 329 100.0
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 4.0e-150 535.0 331 89.7
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 4.4e-149 531.6 331 87.9
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 6.6e-145 517.7 331 84.6
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 7.3e-128 461.1 279 86.0
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.1e-88 330.9 330 60.6
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 2.4e-86 323.2 330 58.5
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 2.6e-85 319.7 330 58.2
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 3.7e-79 299.3 328 54.3
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 4.8e-79 298.9 331 54.4
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 4.5e-77 292.4 331 55.9
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 2.9e-76 289.7 361 52.9
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 1.9e-75 287.0 330 52.7
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 1.9e-75 287.0 329 54.1
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.9e-75 287.0 331 52.6
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.2e-75 286.2 331 53.5
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 7.9e-74 281.6 332 55.4
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.8e-73 280.4 399 47.1
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 3.0e-73 279.6 331 55.3
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 1.1e-72 277.7 333 54.7
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 2.5e-72 276.6 332 54.8
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.7e-71 273.9 330 52.4
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.2e-71 273.5 330 54.5
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 2.2e-71 273.5 333 52.6
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 2.8e-71 273.1 331 53.8
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 2.8e-71 273.1 331 51.7
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 3.7e-71 272.7 331 55.0
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 6.3e-71 271.9 329 51.7
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 1.1e-70 271.2 333 54.1
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.4e-70 270.8 330 50.6
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.4e-70 270.0 309 53.4
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 2.4e-70 270.0 333 52.3
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 9.1e-70 268.1 376 47.6
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 1.2e-69 267.7 329 52.6
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.5e-69 267.3 343 52.2
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 2.6e-69 266.5 348 50.6
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 4.5e-69 265.8 343 52.5
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 5.9e-69 265.4 332 51.5
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.9e-68 263.1 341 51.0
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 3.8e-68 262.7 330 51.8
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 6.5e-68 261.9 330 51.8
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 6.5e-68 261.9 331 50.8
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 8.5e-68 261.5 328 50.9
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 1.9e-67 260.4 330 52.4
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 2.5e-67 260.0 330 53.3
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 9.4e-67 258.1 308 52.9
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.7e-66 256.5 376 45.2
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 1.8e-65 253.8 333 52.3
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 1.5e-64 250.8 331 49.8
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.5e-64 250.8 306 51.0
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 2.0e-64 250.4 333 51.1
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 7.4e-64 248.4 348 48.6
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 9.7e-64 248.1 331 49.5
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 1.3e-63 247.7 349 47.9
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 3.1e-62 243.0 332 50.3
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.3e-62 242.3 338 48.2
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.2e-61 241.1 330 49.7
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 1.5e-61 240.7 355 45.9
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.0e-61 240.4 330 48.2
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 2.6e-61 240.0 332 50.0
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.3e-60 237.7 278 54.0
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 3.8e-60 236.1 334 50.9
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 3.2e-59 233.0 324 50.9
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 2.1e-58 230.3 336 49.7
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.0e-57 228.0 330 47.9
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.0e-57 228.0 339 47.5
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.4e-57 227.6 294 52.7
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.0e-57 226.5 272 51.8
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.8e-57 224.9 333 46.8
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 1.1e-56 224.6 371 45.3
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 3.3e-56 223.0 330 45.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 5.7e-56 222.2 361 45.2
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 1.6e-53 214.2 329 45.0
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.5e-52 208.4 281 51.2
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 9.4e-51 204.9 229 56.3
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 2.3e-49 200.3 368 40.8
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.2e-48 198.0 311 44.1
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 3.3e-48 196.4 370 41.9
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.2e-47 191.8 289 47.1
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 2.0e-45 187.2 376 41.2
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.0e-44 184.9 387 37.2
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 1.5e-43 181.0 326 42.3
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 7.2e-43 178.7 291 43.3
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 8.0e-42 175.3 413 38.0
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.8e-41 174.1 270 44.8
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 9.8e-40 168.3 382 36.6
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 3.7e-39 166.4 293 43.3
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.3e-39 165.2 202 51.0
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 1.4e-38 164.5 336 41.1
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 2.4e-38 163.7 304 39.5
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 5.4e-38 162.5 209 47.8
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 9.1e-38 161.8 302 41.4
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.7e-36 157.5 258 41.1
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 3.8e-36 156.4 303 40.3
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 5.0e-36 156.0 161 62.1
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 5.0e-36 156.0 377 38.2
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 6.6e-36 155.6 270 43.3
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 6.6e-36 155.6 270 43.3
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 4.2e-35 152.9 268 41.0
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 4.2e-35 152.9 268 41.0
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 7.2e-35 152.1 285 41.8
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 9.5e-35 151.8 303 38.0
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 1.2e-34 151.4 379 38.0
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 3.6e-34 149.8 232 42.2
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 6.1e-34 149.1 389 37.0
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.0e-34 148.7 132 63.6
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 8.9e-33 145.2 334 38.0
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 2.6e-32 143.7 284 40.5
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 6.3e-31 139.0 340 37.1
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.4e-30 137.9 285 36.8
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.1e-30 136.7 129 58.1
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 4.5e-29 132.9 135 60.0
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.9e-27 127.5 152 52.6
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 9.5e-27 125.2 149 51.0
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 2.3e-25 120.6 270 37.4
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 3.7e-23 113.2 102 66.7
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.0e-20 103.6 107 62.6
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.0e-20 103.6 107 62.6
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.1e-17 93.6 61 75.4
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 1.5e-16 91.3 117 46.2
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 9.8e-16 88.6 130 41.5
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 1.3e-15 88.2 62 67.7
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 1.7e-15 87.8 59 69.5
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 3.7e-15 86.7 142 43.0
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.9e-12 76.6 101 46.5
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.9e-12 76.6 101 46.5
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.1e-10 68.9 139 35.3
Solyc11g011495.1 Solanum lycopersicum HOM05D006010 ORTHO05D007381 4.4e-08 63.2 52 80.8
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 5.4e-06 56.2 58 55.2
VMungo0647G0061 Vigna mungo HOM05D026408 ORTHO05D029776 5.4e-06 56.2 120 35.8
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 7.1e-06 55.8 202 31.2


User provided reference genes

Program Settings