Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2020.2 Capsicum annuum HOM05D024491 ORTHO05D000022 4.7e-48 194.1 94 100.0
Solyc01g057740.3 Solanum lycopersicum HOM05D024491 ORTHO05D000022 2.5e-20 102.1 85 51.8
Sopen01g022990 Solanum pennellii HOM05D024491 ORTHO05D000022 1.6e-19 99.4 81 53.1
Peaxi162Scf00079g00195 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-18 96.3 81 49.4
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-15 84.7 83 43.4
PGSC0003DMG400014751 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.3e-15 84.3 76 44.7
CAN.G883.22 Capsicum annuum HOM05D000155 ORTHO05D000022 1.7e-13 79.3 81 40.7
CAN.G1598.9 Capsicum annuum HOM05D000155 ORTHO05D000022 4.2e-12 74.7 78 38.5
Nitab4.5_0000254g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-11 72.4 72 41.7
CAN.G389.8 Capsicum annuum HOM05D064608 ORTHO05D000022 3.6e-11 71.6 43 76.7
Nitab4.5_0001348g0150 Nicotiana tabacum HOM05D014464 ORTHO05D000022 7.9e-11 70.5 85 40.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 7.9e-11 70.5 80 38.8
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.9e-11 70.5 80 38.8
Nitab4.5_0005413g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-10 68.9 62 48.4
CAN.G1086.3 Capsicum annuum HOM05D024491 ORTHO05D000022 3.0e-10 68.6 72 47.2
Nitab4.5_0000335g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.1e-10 67.8 84 36.9
Nitab4.5_0000023g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.7e-10 67.4 82 35.4
Nitab4.5_0002956g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-09 66.6 75 38.7
Nitab4.5_0000358g0080 Nicotiana tabacum HOM05D004990 ORTHO05D000022 1.5e-09 66.2 75 38.7
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-09 66.2 70 38.6
Peaxi162Scf00025g00282 Petunia axillaris HOM05D000155 ORTHO05D000022 1.5e-09 66.2 82 36.6
PGSC0003DMG400013767 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.5e-09 66.2 62 43.5
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-09 65.9 81 34.6
Nitab4.5_0000469g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-09 65.9 79 32.9
Nitab4.5_0004776g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.5e-09 65.5 81 34.6
Peaxi162Scf01147g00005 Petunia axillaris HOM05D000155 ORTHO05D000022 2.5e-09 65.5 80 37.5
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-09 65.5 81 39.5
Nitab4.5_0009185g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.7e-09 64.3 76 38.2
Nitab4.5_0010722g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.7e-09 64.3 83 37.3
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 9.7e-09 63.5 81 34.6
Nitab4.5_0002922g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-08 63.2 80 36.2
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.3e-08 63.2 81 33.3
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.3e-08 63.2 80 36.2
CAN.G126.22 Capsicum annuum HOM05D000155 ORTHO05D000022 1.7e-08 62.8 81 34.6
CAN.G280.10 Capsicum annuum HOM05D000155 ORTHO05D000022 1.7e-08 62.8 69 39.1
Nitab4.5_0000206g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-08 62.8 81 33.3
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-08 62.8 83 32.5
PGSC0003DMG400037358 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.7e-08 62.8 73 38.4
Sopen05g018930 Solanum pennellii HOM05D000155 ORTHO05D000022 2.2e-08 62.4 81 33.3
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-08 62.4 84 28.6
CAN.G529.35 Capsicum annuum HOM05D000024 ORTHO05D000007 2.8e-08 62.0 56 46.4
Nitab4.5_0002045g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.8e-08 62.0 81 35.8
Peaxi162Scf00014g01614 Petunia axillaris HOM05D000155 ORTHO05D000022 3.7e-08 61.6 81 34.6
PGSC0003DMG400021800 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.7e-08 61.6 53 49.1
PGSC0003DMG400014983 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.2e-08 60.5 73 34.2
Nitab4.5_0000613g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-07 60.1 74 40.5
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-07 60.1 63 41.3
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 1.1e-07 60.1 81 35.8
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-07 60.1 81 34.6
PGSC0003DMG400041121 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.1e-07 60.1 76 36.8
Nitab4.5_0000413g0190 Nicotiana tabacum HOM05D014464 ORTHO05D000022 1.4e-07 59.7 57 43.9
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.4e-07 59.7 80 33.8
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-07 59.7 81 34.6
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.4e-07 59.7 81 35.8
Nitab4.5_0000031g0390 Nicotiana tabacum HOM05D014464 ORTHO05D001389 1.8e-07 59.3 67 41.8
Nitab4.5_0000799g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-07 59.3 76 35.5
Nitab4.5_0004015g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-07 59.3 83 34.9
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.8e-07 59.3 81 34.6
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 1.8e-07 59.3 80 36.2
Nitab4.5_0000158g0050 Nicotiana tabacum HOM05D052671 ORTHO05D000022 2.4e-07 58.9 86 30.2
Nitab4.5_0000682g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-07 58.9 82 36.6
Peaxi162Scf00479g00117 Petunia axillaris HOM05D000155 ORTHO05D000022 2.4e-07 58.9 83 31.3
Peaxi162Scf01149g10016 Petunia axillaris HOM05D000155 ORTHO05D000022 2.4e-07 58.9 76 38.2
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-07 58.9 72 38.9
SEGI_37075 Sequoiadendron giganteum HOM05D010149 ORTHO05D013351 4.1e-07 58.2 88 36.4
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.1e-07 58.2 81 34.6
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 5.3e-07 57.8 66 36.4
Nitab4.5_0003347g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.9e-07 57.4 64 40.6
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-07 57.0 81 33.3
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 9.1e-07 57.0 67 34.3
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-07 57.0 81 33.3
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 9.1e-07 57.0 81 33.3
EL10Ac6g13741 Beta vulgaris HOM05D008685 ORTHO05D000022 1.2e-06 56.6 61 44.3
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-06 56.6 78 35.9
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-06 56.6 67 44.8
Peaxi162Scf00229g00123 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-06 56.6 67 44.8
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.2e-06 56.6 69 40.6
Nitab4.5_0004637g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-06 56.2 81 30.9
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 1.5e-06 56.2 80 31.2
MBI11_g19465_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 55.8 66 37.9
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-06 55.8 79 36.7
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-06 55.8 63 39.7
Sopen05g012830 Solanum pennellii HOM05D000155 ORTHO05D000022 2.0e-06 55.8 80 31.2
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 2.6e-06 55.5 83 32.5
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-06 55.5 83 32.5
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.6e-06 55.5 81 33.3
PGSC0003DMG400025606 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.6e-06 55.5 76 35.5
Nitab4.5_0012527g0020 Nicotiana tabacum HOM05D001995 ORTHO05D000022 3.4e-06 55.1 66 39.4
Solyc07g041740.1 Solanum lycopersicum HOM05D000155 ORTHO05D000022 3.4e-06 55.1 57 38.6
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 3.4e-06 55.1 80 32.5
Nitab4.5_0000914g0230 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.5e-06 54.7 83 30.1
Nitab4.5_0001027g0210 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.5e-06 54.7 61 37.7
PGSC0003DMG400012094 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.5e-06 54.7 81 30.9
MBI04_g26264_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-06 54.3 72 37.5
Nitab4.5_0000508g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.9e-06 54.3 67 37.3
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 5.9e-06 54.3 80 33.8
Sopen05g018040 Solanum pennellii HOM05D000155 ORTHO05D000022 5.9e-06 54.3 67 32.8
MBI13_g30485_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 53.9 64 39.1
Nitab4.5_0003475g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.7e-06 53.9 78 33.3
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.7e-06 53.9 69 39.1
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 7.7e-06 53.9 84 32.1
SHI41809 Sapria himalayana HOM05D000003 ORTHO05D000004 7.7e-06 53.9 71 35.2
Sopen01g005290 Solanum pennellii HOM05D000155 ORTHO05D000022 7.7e-06 53.9 67 32.8


User provided reference genes

Program Settings