Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1632.3 Capsicum annuum HOM05D003365 ORTHO05D003899 3.8e-47 191.0 89 100.0
CAN.G500.11 Capsicum annuum HOM05D003365 ORTHO05D003899 3.8e-39 164.5 85 89.4
CAN.G572.29 Capsicum annuum HOM05D003365 ORTHO05D003899 2.3e-36 155.2 85 87.1
PGSC0003DMG400029661 Solanum tuberosum HOM05D003365 ORTHO05D003899 4.7e-29 131.0 85 69.4
Sopen09g034680 Solanum pennellii HOM05D003365 ORTHO05D003899 6.1e-29 130.6 85 67.1
Solyc09g091790.3 Solanum lycopersicum HOM05D003365 ORTHO05D003899 5.2e-28 127.5 85 65.9
Nitab4.5_0002428g0050 Nicotiana tabacum HOM05D003365 ORTHO05D003899 8.8e-28 126.7 85 64.7
Peaxi162Scf00047g00641 Petunia axillaris HOM05D003365 ORTHO05D003899 2.6e-27 125.2 85 63.5
CAN.G1061.15 Capsicum annuum HOM05D000222 ORTHO05D012343 1.7e-23 112.5 61 90.2
CAN.G186.14 Capsicum annuum HOM05D003365 ORTHO05D003899 1.1e-22 109.8 61 88.5
Nitab4.5_0004214g0020 Nicotiana tabacum HOM05D003365 ORTHO05D003899 1.5e-22 109.4 74 64.9
CAN.G8.3 Capsicum annuum HOM05D003365 ORTHO05D003899 4.2e-22 107.8 64 82.8
CAN.G756.46 Capsicum annuum HOM05D000002 ORTHO05D000001 1.8e-20 102.4 69 66.7
CAN.G261.16 Capsicum annuum HOM05D000222 ORTHO05D000001 1.1e-14 83.2 50 70.0
MSTRG.24620 Avicennia marina HOM05D003365 ORTHO05D003899 1.9e-14 82.4 87 43.7
Potri.003G178700 Populus trichocarpa HOM05D003365 ORTHO05D003899 9.5e-14 80.1 85 45.9
Migut.N00374 Erythranthe guttata HOM05D003365 ORTHO05D003899 8.0e-13 77.0 88 42.0
RcHm_v2.0_Chr4g0386021 Rosa chinensis HOM05D003365 ORTHO05D003899 1.0e-12 76.6 85 42.4
FvH4_4g00570 Fragaria vesca HOM05D003365 ORTHO05D003899 2.3e-12 75.5 85 42.4
FAN12G1463 Fragaria x ananassa HOM05D003365 ORTHO05D003899 2.3e-12 75.5 85 42.4
Dinv38244 Davidia involucrata HOM05D003365 ORTHO05D003899 3.0e-12 75.1 91 44.0
Atru.chr4.1724 Acer truncatum HOM05D003365 ORTHO05D003899 4.0e-12 74.7 85 42.4
Ciclev10004856m.g Citrus clementina HOM05D003365 ORTHO05D003899 1.2e-11 73.2 86 40.7
COL.COLO4_10278 Corchorus olitorius HOM05D003365 ORTHO05D003899 2.0e-11 72.4 85 42.4
Duzib151G0831 Durio zibethinus HOM05D003365 ORTHO05D003899 2.0e-11 72.4 85 42.4
CAN.G859.9 Capsicum annuum HOM05D003365 ORTHO05D003899 2.6e-11 72.0 39 92.3
Gohir.A09G204300 Gossypium hirsutum HOM05D003365 ORTHO05D003899 2.6e-11 72.0 85 37.6
Gohir.D09G198000 Gossypium hirsutum HOM05D003365 ORTHO05D003899 2.6e-11 72.0 85 37.6
Gorai.006G221600 Gossypium raimondii HOM05D003365 ORTHO05D003899 2.6e-11 72.0 85 37.6
CSS0049236 Camellia sinensis var. sinensis HOM05D003365 ORTHO05D003899 3.4e-11 71.6 92 37.0
Prupe.1G006100 Prunus persica HOM05D003365 ORTHO05D003899 3.4e-11 71.6 85 42.4
Thecc.04G205700 Theobroma cacao HOM05D003365 ORTHO05D003899 9.8e-11 70.1 84 40.5
Oeu006726.3 Olea europaea HOM05D003365 ORTHO05D003899 2.2e-10 68.9 88 39.8
arahy.Tifrunner.gnm1.ann1.E2CR6D Arachis hypogaea HOM05D003365 ORTHO05D003899 4.9e-10 67.8 85 40.0
Gohir.D02G123200 Gossypium hirsutum HOM05D003365 ORTHO05D003899 4.9e-10 67.8 85 40.0
Gorai.005G131100 Gossypium raimondii HOM05D003365 ORTHO05D003899 4.9e-10 67.8 85 40.0
Oeu022364.1 Olea europaea HOM05D003365 ORTHO05D003899 4.9e-10 67.8 87 41.4
Sabra03G0131000 Salix brachista HOM05D003365 ORTHO05D003899 8.3e-10 67.0 105 34.3
arahy.Tifrunner.gnm1.ann1.2FCG8X Arachis hypogaea HOM05D003365 ORTHO05D003899 1.1e-09 66.6 85 38.8
PSO017G5557 Papaver somniferum HOM05D003365 ORTHO05D003899 1.8e-09 65.9 92 32.6
AUR62031803 Chenopodium quinoa HOM05D003365 ORTHO05D003899 3.1e-09 65.1 95 35.8
MBI10_g18941_MAGBIO Magnolia biondii HOM05D003365 ORTHO05D003899 4.1e-09 64.7 87 39.1
Rhsim09G0055000 Rhododendron simsii HOM05D003365 ORTHO05D003899 5.4e-09 64.3 89 34.8
Glyma.08G354400 Glycine max HOM05D003365 ORTHO05D003899 7.0e-09 63.9 85 37.6
MD04G1005700 Malus domestica HOM05D003365 ORTHO05D003899 9.2e-09 63.5 85 40.0
Actinidia09483 Actinidia chinensis HOM05D003365 ORTHO05D003899 1.6e-08 62.8 85 38.8
FAN22G2379 Fragaria x ananassa HOM05D003365 ORTHO05D003899 1.6e-08 62.8 102 35.3
Glyma.18G171400 Glycine max HOM05D003365 ORTHO05D003899 2.0e-08 62.4 85 36.5
Lj3g0005766 Lotus japonicus HOM05D003365 ORTHO05D003899 2.0e-08 62.4 86 39.5
Medtr4g022320 Medicago truncatula HOM05D003365 ORTHO05D003899 2.0e-08 62.4 87 41.4
Psat3g144800 Pisum sativum HOM05D003365 ORTHO05D003899 2.0e-08 62.4 85 38.8
SGA_v2.0_scaffold1G00747 Striga asiatica HOM05D003365 ORTHO05D003899 2.0e-08 62.4 92 37.0
THA.LOC104808785 Tarenaya hassleriana HOM05D003365 ORTHO05D003899 4.5e-08 61.2 85 37.6
Phvul.008G125500 Phaseolus vulgaris HOM05D003365 ORTHO05D003899 7.8e-08 60.5 85 37.6
Prupe.8G203400 Prunus persica HOM05D003365 ORTHO05D003899 7.8e-08 60.5 88 42.0
GSVIVG01028643001 Vitis vinifera HOM05D003365 ORTHO05D003899 7.8e-08 60.5 90 34.4
CAN.G56.16 Capsicum annuum HOM05D000222 ORTHO05D003899 1.0e-07 60.1 85 40.0
Medtr7g058430 Medicago truncatula HOM05D003365 ORTHO05D003899 1.0e-07 60.1 88 35.2
Lsat_1_v5_gn_1_72781 Lactuca sativa HOM05D003365 ORTHO05D003899 1.7e-07 59.3 86 34.9
Lalb_Chr12g0209691 Lupinus albus HOM05D003365 ORTHO05D003899 1.7e-07 59.3 87 37.9
EL10Ac7g17831 Beta vulgaris HOM05D003365 ORTHO05D003899 2.3e-07 58.9 96 34.4
Manes.12G045750 Manihot esculenta HOM05D003365 ORTHO05D003899 2.3e-07 58.9 87 39.1
Migut.D00534 Erythranthe guttata HOM05D003365 ORTHO05D003899 2.9e-07 58.5 96 36.5
Lalb_Chr19g0125591 Lupinus albus HOM05D003365 ORTHO05D003899 2.9e-07 58.5 86 38.4
THA.LOC104804607 Tarenaya hassleriana HOM05D003365 ORTHO05D003899 2.9e-07 58.5 85 37.6
TWI75G0239 Tripterygium wilfordii HOM05D003365 ORTHO05D003899 2.9e-07 58.5 91 35.2
TAR365G1159 Trochodendron aralioides HOM05D003365 ORTHO05D003899 2.9e-07 58.5 85 36.5
BcaB06g26698 Brassica carinata HOM05D003365 ORTHO05D003899 5.0e-07 57.8 94 36.2
Potri.002G241900 Populus trichocarpa HOM05D003365 ORTHO05D003899 5.0e-07 57.8 94 34.0
VMungo1383G0959 Vigna mungo HOM05D003365 ORTHO05D003899 5.0e-07 57.8 85 35.3
BcaC01g03254 Brassica carinata HOM05D003365 ORTHO05D003899 8.6e-07 57.0 92 34.8
A03p43940 Brassica napus HOM05D003365 ORTHO05D003899 8.6e-07 57.0 92 34.8
C03p54290 Brassica napus HOM05D003365 ORTHO05D003899 8.6e-07 57.0 92 34.8
BraA03t13524Z Brassica rapa HOM05D003365 ORTHO05D003899 8.6e-07 57.0 92 34.8
Ca_07518_v3 Cicer arietinum L. HOM05D003365 ORTHO05D003899 8.6e-07 57.0 88 35.2
Ca_30737_v3 Cicer arietinum L. HOM05D003365 ORTHO05D003899 8.6e-07 57.0 88 35.2
Psat0s1248g0040 Pisum sativum HOM05D003365 ORTHO05D003899 8.6e-07 57.0 87 37.9
Lj1g0007670 Lotus japonicus HOM05D003365 ORTHO05D003899 1.1e-06 56.6 89 39.3
TWI36G1690 Tripterygium wilfordii HOM05D003365 ORTHO05D003899 1.1e-06 56.6 92 33.7
Ah.08g214240 Amaranthus hybridus HOM05D000836 ORTHO05D000709 1.5e-06 56.2 91 29.7
Aqoxy2G03887 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.5e-06 56.2 88 35.2
MSTRG.18389 Avicennia marina HOM05D003365 ORTHO05D003899 1.9e-06 55.8 93 34.4
BolC3t17715H Brassica oleracea HOM05D003365 ORTHO05D003899 1.9e-06 55.8 92 34.8
Carub.0003s2521 Capsella rubella HOM05D003365 ORTHO05D003899 1.9e-06 55.8 90 33.3
CiPaw.03G149600 Carya illinoinensis HOM05D003365 ORTHO05D003899 1.9e-06 55.8 85 36.5
Cc01_g17090 Coffea canephora HOM05D003365 ORTHO05D003899 2.5e-06 55.5 95 34.7
HanXRQChr09g0249321 Helianthus annuus HOM05D003365 ORTHO05D003899 2.5e-06 55.5 85 32.9
Hund05541 Selenicereus undatus HOM05D003365 ORTHO05D003899 2.5e-06 55.5 96 35.4
Hund05542 Selenicereus undatus HOM05D003365 ORTHO05D003899 2.5e-06 55.5 96 35.4
TPR.G5612 Trifolium pratense HOM05D003365 ORTHO05D003899 2.5e-06 55.5 87 40.2
vmacro14754 Vaccinium macrocarpon HOM05D003365 ORTHO05D003899 2.5e-06 55.5 85 40.0
Cc01_g17080 Coffea canephora HOM05D003365 ORTHO05D003899 3.3e-06 55.1 95 33.7
Dinv04652 Davidia involucrata HOM05D003365 ORTHO05D003899 4.3e-06 54.7 91 37.4
MELO3C021013.2 Cucumis melo HOM05D003365 ORTHO05D003899 5.6e-06 54.3 91 35.2
Eucgr.K02171 Eucalyptus grandis HOM05D003365 ORTHO05D003899 5.6e-06 54.3 90 34.4
FAN12G0224 Fragaria x ananassa HOM05D003365 ORTHO05D003899 5.6e-06 54.3 70 40.0
Sed0009580 Sechium edule HOM05D003365 ORTHO05D003899 5.6e-06 54.3 91 37.4
Zm00001eb247460 Zea mays HOM05D003365 ORTHO05D003899 5.6e-06 54.3 87 36.8
ClCG09G009060 Citrullus lanatus HOM05D003365 ORTHO05D003899 7.3e-06 53.9 93 36.6
MD10G1165000 Malus domestica HOM05D003365 ORTHO05D003899 7.3e-06 53.9 88 33.0
Duzib138G0916 Durio zibethinus HOM05D003365 ORTHO05D003899 9.5e-06 53.5 86 34.9
ECA248G1941 Erigeron canadensis HOM05D003365 ORTHO05D000452 9.5e-06 53.5 88 35.2


User provided reference genes

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