Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1497.17 Capsicum annuum HOM05D004422 ORTHO05D007331 3.7e-174 614.8 309 100.0
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 2.4e-157 558.9 333 86.5
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 4.7e-153 544.7 334 85.0
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 8.0e-153 543.9 333 85.0
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 1.2e-148 530.0 334 83.5
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 2.0e-143 512.7 333 78.7
vmacro13500 Vaccinium macrocarpon HOM05D004422 ORTHO05D007331 7.8e-140 500.7 311 80.7
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 3.0e-139 498.8 337 76.3
Dinv44059 Davidia involucrata HOM05D004422 ORTHO05D007331 5.6e-138 494.6 337 76.6
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 1.6e-137 493.0 341 76.0
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 1.7e-134 483.0 342 74.6
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 1.4e-133 479.9 345 73.9
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 3.2e-133 478.8 341 73.0
SalBow5G1783 Salvia bowleyana HOM05D004422 ORTHO05D007331 1.2e-132 476.9 343 73.8
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 1.6e-132 476.5 344 73.3
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 2.7e-132 475.7 338 74.3
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 7.8e-132 474.2 339 74.0
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 7.8e-132 474.2 353 71.7
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 1.3e-131 473.4 340 74.1
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 2.3e-131 472.6 341 74.2
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 3.9e-131 471.9 348 73.6
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 5.1e-131 471.5 339 72.0
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 8.6e-131 470.7 343 73.5
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 8.6e-131 470.7 339 72.6
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 1.9e-130 469.5 334 72.2
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 5.6e-130 468.0 337 75.1
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 5.6e-130 468.0 343 73.2
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 9.6e-130 467.2 337 72.7
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 9.6e-130 467.2 341 73.9
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 1.2e-129 466.8 341 71.0
arahy.Tifrunner.gnm1.ann1.Q83G00 Arachis hypogaea HOM05D004422 ORTHO05D007331 1.2e-129 466.8 338 72.5
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 1.6e-129 466.5 351 71.8
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 2.8e-129 465.7 348 72.7
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 4.7e-129 464.9 337 74.2
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 8.1e-129 464.2 342 72.8
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.1e-128 463.8 337 74.2
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 1.1e-128 463.8 344 72.4
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 1.1e-128 463.8 343 73.5
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 2.4e-128 462.6 339 72.0
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 2.4e-128 462.6 343 71.4
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 4.0e-128 461.8 341 72.7
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 8.9e-128 460.7 342 71.3
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 1.2e-127 460.3 336 71.4
Cpa.g.sc22.52 Carica papaya HOM05D004422 ORTHO05D007331 2.0e-127 459.5 342 72.5
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 2.0e-127 459.5 340 70.9
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 2.6e-127 459.1 340 71.2
Glyma.03G110500 Glycine max HOM05D004422 ORTHO05D007331 3.4e-127 458.8 346 71.1
VMungo0331G1046 Vigna mungo HOM05D004422 ORTHO05D007331 7.6e-127 457.6 347 70.9
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 9.9e-127 457.2 340 70.9
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 1.7e-126 456.4 369 68.3
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 1.4e-125 453.4 280 81.8
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 1.4e-125 453.4 341 72.1
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 1.9e-125 453.0 340 70.9
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 3.2e-125 452.2 344 71.8
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 3.2e-125 452.2 333 71.2
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 5.4e-125 451.4 341 71.6
TAR375G0830 Trochodendron aralioides HOM05D004422 ORTHO05D007331 9.3e-125 450.7 291 78.7
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 3.5e-124 448.7 337 70.6
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 3.5e-124 448.7 264 83.0
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 1.0e-123 447.2 338 70.7
Sp5g30300 Schrenkiella parvula HOM05D004422 ORTHO05D007331 1.7e-123 446.4 341 71.6
Carub.0005s1421 Capsella rubella HOM05D004422 ORTHO05D007331 2.3e-123 446.0 331 70.7
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 5.1e-123 444.9 344 69.8
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 5.1e-123 444.9 344 69.8
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 6.6e-123 444.5 350 68.6
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 1.5e-122 443.4 335 69.9
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 1.5e-122 443.4 343 69.7
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 1.5e-122 443.4 343 69.7
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 3.3e-122 442.2 353 69.4
Nitab4.5_0002685g0030 Nicotiana tabacum HOM05D004422 ORTHO05D007331 4.3e-122 441.8 326 74.8
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 7.3e-122 441.0 330 69.4
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 2.1e-121 439.5 334 71.3
TPR.G33119 Trifolium pratense HOM05D004422 ORTHO05D007331 4.8e-121 438.3 333 69.1
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 1.8e-120 436.4 336 70.8
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 1.8e-120 436.4 385 65.2
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 5.3e-120 434.9 354 67.5
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 4.4e-119 431.8 333 69.1
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 1.7e-118 429.9 338 67.2
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 2.2e-118 429.5 292 75.0
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 8.4e-118 427.6 381 64.3
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 1.9e-117 426.4 346 66.8
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.2e-117 425.2 255 81.6
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 4.2e-117 425.2 290 75.2
COL.COLO4_30046 Corchorus olitorius HOM05D004422 ORTHO05D007331 6.2e-113 411.4 341 67.7
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 1.2e-111 407.1 244 82.8
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 4.5e-111 405.2 290 70.7
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 1.3e-110 403.7 315 69.2
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 1.7e-110 403.3 290 69.3
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 4.9e-110 401.7 298 69.1
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 2.1e-108 396.4 238 82.4
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea HOM05D004422 ORTHO05D007331 2.7e-108 396.0 237 82.7
FAN10G2373 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.0e-107 394.0 309 69.9
Oeu000053.1 Olea europaea HOM05D004422 ORTHO05D007331 1.4e-104 383.6 232 82.8
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 1.5e-103 380.2 270 67.8
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 7.6e-103 377.9 244 76.6
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 1.2e-95 354.0 266 63.9
Phvul.010G049401 Phaseolus vulgaris HOM05D004422 ORTHO05D007331 7.2e-93 344.7 214 80.4
Prupe.2G132400 Prunus persica HOM05D004422 ORTHO05D007331 6.1e-92 341.7 215 80.0
MCO03G257 Micromonas commoda HOM05D004422 ORTHO05D007331 6.3e-89 331.6 305 55.4
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 4.1e-88 328.9 266 62.4
SEGI_38441 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 1.0e-83 314.3 226 71.2
COL.COLO4_07156 Corchorus olitorius HOM05D004422 ORTHO05D007331 2.9e-78 296.2 249 65.5
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 3.2e-77 292.7 316 54.7
CDE09G1306 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 2.6e-66 256.5 192 72.4
Actinidia32507 Actinidia chinensis HOM05D004422 ORTHO05D007331 5.9e-63 245.4 169 76.3
Haze_27357 Corylus avellana HOM05D004422 ORTHO05D007331 1.8e-59 233.8 279 43.7
FvH4_7g10270 Fragaria vesca HOM05D004422 ORTHO05D007331 2.2e-54 216.9 121 89.3
QL04p030068 Quercus lobata HOM05D004422 ORTHO05D007331 7.2e-53 211.8 186 64.0
SGA_v2.0_scaffold52G19231 Striga asiatica HOM05D004422 ORTHO05D030592 1.0e-30 138.3 70 95.7
FAN06G1066 Fragaria x ananassa HOM05D004422 ORTHO05D007331 9.5e-29 131.7 123 64.2
FAN10G4150 Fragaria x ananassa HOM05D004422 ORTHO05D007331 9.5e-29 131.7 123 64.2
CDE09G1442 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 4.9e-25 119.4 70 81.4
SEGI_38096 Sequoiadendron giganteum HOM05D004422 ORTHO05D030592 4.3e-21 106.3 70 70.0
Thecc.01G108300 Theobroma cacao HOM05D004422 ORTHO05D408993 1.1e-13 81.6 109 45.9
SGA_v2.0_scaffold902G53711 Striga asiatica HOM05D004422 ORTHO05D030592 1.2e-10 71.6 33 100.0


User provided reference genes

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