Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G140.1 Capsicum annuum HOM05D005446 ORTHO05D006597 1.6e-82 309.3 153 100.0
Sopen01g002260 Solanum pennellii HOM05D005446 ORTHO05D006597 4.3e-75 284.6 155 91.6
PGSC0003DMG400032145 Solanum tuberosum HOM05D005446 ORTHO05D006597 1.3e-74 283.1 155 91.6
Solyc01g006260.4 Solanum lycopersicum HOM05D005446 ORTHO05D006597 9.4e-70 266.9 145 91.7
Peaxi162Scf00192g00016 Petunia axillaris HOM05D005446 ORTHO05D006597 2.7e-69 265.4 155 81.9
Peaxi162Scf00038g02639 Petunia axillaris HOM05D005446 ORTHO05D006597 7.9e-69 263.8 155 81.3
Oeu029325.1 Olea europaea HOM05D005446 ORTHO05D006597 6.5e-63 244.2 155 74.8
Dinv17279 Davidia involucrata HOM05D005446 ORTHO05D006597 1.9e-62 242.7 155 73.5
Nitab4.5_0005132g0070 Nicotiana tabacum HOM05D005446 ORTHO05D006597 4.7e-61 238.0 133 87.2
COL.COLO4_20178 Corchorus olitorius HOM05D005446 ORTHO05D006597 8.0e-61 237.3 155 71.0
Haze_00330 Corylus avellana HOM05D005446 ORTHO05D006597 8.0e-61 237.3 155 72.9
Lj3A584T51 Lonicera japonica HOM05D005446 ORTHO05D006597 1.8e-60 236.1 155 69.7
TAR383G0718 Trochodendron aralioides HOM05D005446 ORTHO05D006597 1.8e-60 236.1 155 71.6
CiPaw.06G038600 Carya illinoinensis HOM05D005446 ORTHO05D006597 2.3e-60 235.7 155 71.0
Thecc.04G200100 Theobroma cacao HOM05D005446 ORTHO05D006597 2.3e-60 235.7 155 70.3
MSTRG.26955 Avicennia marina HOM05D005446 ORTHO05D006597 4.0e-60 235.0 155 72.3
Cfa016130 Carpinus fangiana HOM05D005446 ORTHO05D006597 6.7e-60 234.2 155 71.6
Haze_23920 Corylus avellana HOM05D005446 ORTHO05D006597 8.8e-60 233.8 155 71.0
Duzib151G0274 Durio zibethinus HOM05D005446 ORTHO05D006597 8.8e-60 233.8 155 69.7
GSVIVG01038676001 Vitis vinifera HOM05D005446 ORTHO05D006597 8.8e-60 233.8 155 71.6
Eucgr.K00475 Eucalyptus grandis HOM05D005446 ORTHO05D006597 2.0e-59 232.6 155 71.0
vmacro06473 Vaccinium macrocarpon HOM05D005446 ORTHO05D006597 3.3e-59 231.9 155 69.0
Gorai.001G114700 Gossypium raimondii HOM05D005446 ORTHO05D006597 4.4e-59 231.5 155 69.0
Gohir.A07G102600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 5.7e-59 231.1 155 68.4
Eucgr.K00477 Eucalyptus grandis HOM05D005446 ORTHO05D006597 9.7e-59 230.3 155 69.0
QL09p006048 Quercus lobata HOM05D005446 ORTHO05D006597 9.7e-59 230.3 154 70.1
Cc02_g16080 Coffea canephora HOM05D005446 ORTHO05D006597 1.3e-58 229.9 155 73.5
Eucgr.L02508 Eucalyptus grandis HOM05D005446 ORTHO05D006597 1.3e-58 229.9 155 69.7
MBI12_g19204_MAGBIO Magnolia biondii HOM05D005446 ORTHO05D006597 1.3e-58 229.9 155 70.3
Manes.18G108200 Manihot esculenta HOM05D005446 ORTHO05D006597 1.3e-58 229.9 155 69.7
Gohir.D07G001000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 2.2e-58 229.2 155 68.4
Lj1A1031T79 Lonicera japonica HOM05D005446 ORTHO05D006597 2.8e-58 228.8 155 67.7
Nitab4.5_0022559g0010 Nicotiana tabacum HOM05D005446 ORTHO05D006597 3.7e-58 228.4 127 87.4
Potri.015G001200 Populus trichocarpa HOM05D005446 ORTHO05D006597 3.7e-58 228.4 155 69.0
Migut.F00126 Erythranthe guttata HOM05D005446 ORTHO05D006597 4.8e-58 228.0 155 69.7
CSS0004780 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 1.1e-57 226.9 155 69.7
CSS0007128 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 1.4e-57 226.5 156 67.3
CSS0045409 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 1.4e-57 226.5 156 67.3
Actinidia08718 Actinidia chinensis HOM05D005446 ORTHO05D006597 1.8e-57 226.1 155 69.0
Gorai.001G000500 Gossypium raimondii HOM05D005446 ORTHO05D006597 2.4e-57 225.7 155 67.1
Rhsim03G0218300 Rhododendron simsii HOM05D005446 ORTHO05D006597 2.4e-57 225.7 155 68.4
unitig_0.g2433 Utricularia gibba HOM05D005446 ORTHO05D006597 2.4e-57 225.7 155 69.7
Gohir.D07G106600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 5.3e-57 224.6 155 67.1
PSO782G3129 Papaver somniferum HOM05D005446 ORTHO05D006597 9.1e-57 223.8 155 67.7
Potri.015G001000 Populus trichocarpa HOM05D005446 ORTHO05D006597 1.2e-56 223.4 155 68.4
Nn1g09694 Nelumbo nucifera HOM05D005446 ORTHO05D006597 1.6e-56 223.0 155 67.7
SGA_v2.0_scaffold44G16871 Striga asiatica HOM05D005446 ORTHO05D006597 1.6e-56 223.0 174 64.4
PSO170G1626 Papaver somniferum HOM05D005446 ORTHO05D006597 2.0e-56 222.6 155 67.1
Atru.chr12.2505 Acer truncatum HOM05D005446 ORTHO05D006597 2.7e-56 222.2 155 65.2
Sabra15G0000700 Salix brachista HOM05D005446 ORTHO05D006597 2.7e-56 222.2 155 66.5
Atru.chr12.2528 Acer truncatum HOM05D005446 ORTHO05D006597 5.9e-56 221.1 155 64.5
EL10Ac3g05135 Beta vulgaris HOM05D005446 ORTHO05D006597 5.9e-56 221.1 155 64.5
AUR62028113 Chenopodium quinoa HOM05D005446 ORTHO05D006597 1.3e-55 219.9 155 65.2
Gohir.A03G015000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 1.3e-55 219.9 155 67.7
AUR62005952 Chenopodium quinoa HOM05D005446 ORTHO05D006597 1.7e-55 219.5 155 65.2
DCAR_008034 Daucus carota HOM05D005446 ORTHO05D006597 1.7e-55 219.5 153 68.0
Ciclev10006132m.g Citrus clementina HOM05D005446 ORTHO05D006597 8.5e-55 217.2 155 65.2
Glyma.14G188600 Glycine max HOM05D005446 ORTHO05D006597 8.5e-55 217.2 155 66.5
TWI18G0511 Tripterygium wilfordii HOM05D005446 ORTHO05D006597 1.1e-54 216.9 155 65.8
Cpa.g.sc3.182 Carica papaya HOM05D005446 ORTHO05D006597 2.5e-54 215.7 155 64.5
Glyma.02G221100 Glycine max HOM05D005446 ORTHO05D006597 2.5e-54 215.7 155 64.5
CDE07G1092 Ceratophyllum demersum HOM05D005446 ORTHO05D006597 4.2e-54 214.9 155 63.9
Hund09744 Selenicereus undatus HOM05D005446 ORTHO05D006597 5.5e-54 214.5 155 64.5
ECA247G1253 Erigeron canadensis HOM05D005446 ORTHO05D006597 1.2e-53 213.4 155 66.5
FvH4_7g33290 Fragaria vesca HOM05D005446 ORTHO05D006597 2.1e-53 212.6 155 63.9
HanXRQChr02g0037361 Helianthus annuus HOM05D005446 ORTHO05D006597 2.1e-53 212.6 155 65.8
ClCG09G010380 Citrullus lanatus HOM05D005446 ORTHO05D006597 1.0e-52 210.3 155 65.2
FAN01G0680 Fragaria x ananassa HOM05D005446 ORTHO05D006597 1.0e-52 210.3 155 63.2
RcHm_v2.0_Chr1g0383271 Rosa chinensis HOM05D005446 ORTHO05D006597 1.0e-52 210.3 155 64.5
Ca_05549_v3 Cicer arietinum L. HOM05D005446 ORTHO05D006597 1.8e-52 209.5 154 65.6
FAN03G2203 Fragaria x ananassa HOM05D005446 ORTHO05D006597 1.8e-52 209.5 155 62.6
FAN10G1830 Fragaria x ananassa HOM05D005446 ORTHO05D006597 1.8e-52 209.5 155 63.2
CANSAT64G2376 Cannabis sativa HOM05D005446 ORTHO05D006597 3.0e-52 208.8 155 63.9
Aqoxy5G00887 Aquilegia oxysepala HOM05D005446 ORTHO05D006597 4.0e-52 208.4 152 64.5
Medtr5g068650 Medicago truncatula HOM05D005446 ORTHO05D006597 4.0e-52 208.4 154 65.6
Prupe.2G321800 Prunus persica HOM05D005446 ORTHO05D006597 2.0e-51 206.1 155 61.9
CsaV3_7G024240 Cucumis sativus L. HOM05D005446 ORTHO05D006597 2.6e-51 205.7 155 64.5
HanXRQChr02g0037371 Helianthus annuus HOM05D005446 ORTHO05D006597 3.4e-51 205.3 151 64.2
Sed0027394 Sechium edule HOM05D005446 ORTHO05D006597 3.4e-51 205.3 155 63.2
MD07G1303100 Malus domestica HOM05D005446 ORTHO05D006597 7.5e-51 204.1 155 61.9
LjContig00155g0018941 Lotus japonicus HOM05D005446 ORTHO05D006597 9.8e-51 203.8 155 61.9
TAR629G0354 Trochodendron aralioides HOM05D005446 ORTHO05D006597 9.8e-51 203.8 145 65.5
MELO3C023673.2 Cucumis melo HOM05D005446 ORTHO05D006597 1.7e-50 203.0 155 64.5
Lsat_1_v5_gn_1_26901 Lactuca sativa HOM05D005446 ORTHO05D006597 1.7e-50 203.0 155 64.5
Lalb_Chr10g0102991 Lupinus albus HOM05D005446 ORTHO05D006597 6.3e-50 201.1 155 61.3
Phvul.001G010300 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 3.1e-49 198.7 155 60.6
Phvul.008G188200 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 3.1e-49 198.7 155 60.6
RcHm_v2.0_Chr3g0479561 Rosa chinensis HOM05D005446 ORTHO05D006597 7.0e-49 197.6 155 61.3
Eucgr.K00052 Eucalyptus grandis HOM05D005446 ORTHO05D006597 1.2e-48 196.8 150 64.7
Phvul.L008700 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.6e-48 196.4 155 60.0
ATR0579G170 Amborella trichopoda HOM05D005446 ORTHO05D006597 2.7e-48 195.7 147 61.2
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 3.5e-48 195.3 153 62.1
Phvul.003G000356 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 3.5e-48 195.3 155 60.0
Ah.13g071020 Amaranthus hybridus HOM05D005446 ORTHO05D006597 1.7e-47 193.0 214 48.6
Aa31LG10G6780 Aethionema arabicum HOM05D005446 ORTHO05D006597 2.9e-47 192.2 154 60.4
VMungo0647G1380 Vigna mungo HOM05D005446 ORTHO05D006597 2.9e-47 192.2 147 61.2
Eucgr.K00059 Eucalyptus grandis HOM05D005446 ORTHO05D006597 3.8e-47 191.8 150 62.7
MD01G1231100 Malus domestica HOM05D005446 ORTHO05D006597 5.0e-47 191.4 147 61.9
CARHR003990 Cardamine hirsuta HOM05D005446 ORTHO05D006597 8.5e-47 190.7 156 60.3
TPR.G5849 Trifolium pratense HOM05D005446 ORTHO05D006597 1.5e-46 189.9 154 61.0
HPP92_023794 Vanilla planifolia HOM05D005446 ORTHO05D006597 1.5e-46 189.9 155 57.4
AL1G14320 Arabidopsis lyrata HOM05D005446 ORTHO05D006597 1.9e-46 189.5 156 60.3
Carub.0001s0387 Capsella rubella HOM05D005446 ORTHO05D006597 3.2e-46 188.7 156 60.3
QL04p035447 Quercus lobata HOM05D005446 ORTHO05D006597 4.2e-46 188.3 146 61.6
AT1G04635 Arabidopsis thaliana HOM05D005446 ORTHO05D006597 7.2e-46 187.6 156 60.3
Thhalv10009004m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 1.4e-44 183.3 156 58.3
Zm00001eb200370 Zea mays HOM05D005446 ORTHO05D006597 1.8e-44 183.0 153 56.9
THA.LOC104820657 Tarenaya hassleriana HOM05D005446 ORTHO05D006597 8.8e-44 180.6 156 59.6
Os05g0270500 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 6.3e-42 174.5 148 58.1
SHI13471 Sapria himalayana HOM05D005446 ORTHO05D006597 6.3e-42 174.5 188 48.4
MD07G1302900 Malus domestica HOM05D005446 ORTHO05D006597 8.3e-42 174.1 155 56.1
Sp4g14630 Schrenkiella parvula HOM05D005446 ORTHO05D006597 4.1e-41 171.8 152 54.6
Os04g0295100 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 7.0e-41 171.0 163 54.0
A10p03070 Brassica napus HOM05D002401 ORTHO05D007109 1.6e-40 169.9 154 53.2
BolC5t29066H Brassica oleracea HOM05D002401 ORTHO05D007109 2.0e-40 169.5 154 53.9
C05p02830 Brassica napus HOM05D002401 ORTHO05D007109 2.7e-40 169.1 154 53.9
BraA10t42580Z Brassica rapa HOM05D002401 ORTHO05D007109 3.5e-40 168.7 145 55.2
Sp1g03470 Schrenkiella parvula HOM05D005446 ORTHO05D006597 1.3e-39 166.8 153 52.9
Thhalv10017414m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 2.5e-38 162.5 126 58.7
TAR362G0055 Trochodendron aralioides HOM05D005446 ORTHO05D006597 8.0e-37 157.5 114 66.7
PGR142G4477 Punica granatum HOM05D005446 ORTHO05D006597 8.9e-36 154.1 153 49.0
Psat2g060440 Pisum sativum HOM05D005446 ORTHO05D006597 2.0e-35 152.9 148 51.4
Sc13g0010680 Simmondsia chinensis HOM05D005446 ORTHO05D006597 1.7e-34 149.8 99 71.7
Ciclev10023849m.g Citrus clementina HOM05D005446 ORTHO05D006597 3.7e-34 148.7 103 67.0
arahy.Tifrunner.gnm1.ann1.G1Q0KH Arachis hypogaea HOM05D005446 ORTHO05D006597 1.0e-31 140.6 106 59.4
arahy.Tifrunner.gnm1.ann1.PTVQ9K Arachis hypogaea HOM05D005446 ORTHO05D006597 2.3e-31 139.4 106 58.5
QL09p006020 Quercus lobata HOM05D005446 ORTHO05D006597 1.5e-30 136.7 91 70.3
Oeu055421.1 Olea europaea HOM05D005446 ORTHO05D006597 1.2e-29 133.7 109 61.5
FAN10G3034 Fragaria x ananassa HOM05D005446 ORTHO05D006597 1.6e-29 133.3 104 59.6
SEGI_01150 Sequoiadendron giganteum HOM05D005446 ORTHO05D006597 4.7e-29 131.7 144 43.1
QL09p006057 Quercus lobata HOM05D000605 ORTHO05D001937 1.2e-27 127.1 83 71.1
TPR.G27917 Trifolium pratense HOM05D005446 ORTHO05D006597 1.3e-26 123.6 153 47.1
AagrBONN_evm.TU.Sc2ySwM_117.1519 Anthoceros agrestis HOM05D005446 ORTHO05D006597 7.0e-25 117.9 148 40.5
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 1.6e-24 116.7 147 43.5
Pp3c14_9250 Physcomitrium patens HOM05D005446 ORTHO05D006597 3.0e-23 112.5 124 46.0
SMO356G0648 Selaginella moellendorffii HOM05D005446 ORTHO05D006597 2.0e-19 99.8 153 36.6
Mapoly0096s0024 Marchantia polymorpha HOM05D005446 ORTHO05D006597 4.1e-17 92.0 126 41.3
Psat2g148960 Pisum sativum HOM05D005446 ORTHO05D006597 1.2e-13 80.5 50 76.0
Phvul.L004350 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 6.2e-13 78.2 68 57.4
MELO3C018158.2 Cucumis melo HOM05D005446 ORTHO05D006597 1.1e-12 77.4 68 55.9
Phvul.003G000382 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 2.3e-12 76.3 61 55.7
Phvul.L006525 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 2.3e-12 76.3 61 55.7
Cre01.g026100 Chlamydomonas reinhardtii HOM05D005446 ORTHO05D006597 4.0e-12 75.5 116 37.9


User provided reference genes

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