Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1363.10 Capsicum annuum HOM05D001473 ORTHO05D115282 8.4e-44 179.9 85 100.0
CAN.G1363.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-21 105.9 130 48.5
Lsat_1_v5_gn_5_135881 Lactuca sativa HOM05D001473 ORTHO05D003934 1.0e-09 66.6 66 56.1
Lsat_1_v5_gn_8_72320 Lactuca sativa HOM05D001473 ORTHO05D003934 1.0e-09 66.6 66 56.1
Potri.013G046300 Populus trichocarpa HOM05D001473 ORTHO05D003934 3.9e-09 64.7 76 50.0
Potri.019G018400 Populus trichocarpa HOM05D001473 ORTHO05D003934 3.9e-09 64.7 76 50.0
Sabra19G0028000 Salix brachista HOM05D001473 ORTHO05D003934 3.9e-09 64.7 76 50.0
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 3.9e-09 64.7 76 50.0
Atru.chr2.968 Acer truncatum HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
arahy.Tifrunner.gnm1.ann1.33TMW6 Arachis hypogaea HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
arahy.Tifrunner.gnm1.ann1.8L6PVU Arachis hypogaea HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
arahy.Tifrunner.gnm1.ann1.HJHY8E Arachis hypogaea HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
arahy.Tifrunner.gnm1.ann1.R6YD0H Arachis hypogaea HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
EL10Ac4g09571 Beta vulgaris HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
CSS0041231 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Cpa.g.sc306.1 Carica papaya HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Cfa002922 Carpinus fangiana HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Ciclev10018691m.g Citrus clementina HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Cc02_g08900 Coffea canephora HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
COL.COLO4_15470 Corchorus olitorius HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Haze_25281 Corylus avellana HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
DCAR_023095 Daucus carota HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Dinv18449 Davidia involucrata HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Duzib106G1036 Durio zibethinus HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Duzib128G0032 Durio zibethinus HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Duzib177G0283 Durio zibethinus HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
ECA233G2045 Erigeron canadensis HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Migut.F01544 Erythranthe guttata HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Eucgr.B01570 Eucalyptus grandis HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FvH4_6g01950 Fragaria vesca HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
FAN14G3813 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Glyma.10G165900 Glycine max HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Glyma.20G223300 Glycine max HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Gohir.A13G167900 Gossypium hirsutum HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Gohir.D11G258300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Gohir.D13G173300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Gorai.007G276500 Gossypium raimondii HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Gorai.013G187200 Gossypium raimondii HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
HanXRQChr08g0225461 Helianthus annuus HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Lsat_1_v5_gn_8_2880 Lactuca sativa HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Lj5A229T67 Lonicera japonica HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Lalb_Chr18g0044021 Lupinus albus HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
MD04G1229500 Malus domestica HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
MD12G1246400 Malus domestica HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Manes.08G139000 Manihot esculenta HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Manes.09G148400 Manihot esculenta HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Oeu012234.1 Olea europaea HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Phvul.004G090900 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Phvul.L001860 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
QL03p030821 Quercus lobata HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
RcHm_v2.0_Chr3g0449801 Rosa chinensis HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
SalBow1G0011 Salvia bowleyana HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Sed0003092 Sechium edule HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Hund07267 Selenicereus undatus HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
SEGI_20641 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
SEGI_38835 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Sc08g0009190 Simmondsia chinensis HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
SGA_v2.0_scaffold1G00525 Striga asiatica HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
THA.LOC104805779 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
THA.LOC104823763 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
Thecc.05G271600 Theobroma cacao HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
TWI31G0266 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
TWI79G0745 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
unitig_0.g2788 Utricularia gibba HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
unitig_747.g21794 Utricularia gibba HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
vmacro19999 Vaccinium macrocarpon HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
VMungo0464G0145 Vigna mungo HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
GSVIVG01023527001 Vitis vinifera HOM05D001473 ORTHO05D003934 5.1e-09 64.3 76 50.0
PGR031G3359 Punica granatum HOM05D001473 ORTHO05D003934 6.7e-09 63.9 76 48.7
AL1G20320 Arabidopsis lyrata HOM05D001473 ORTHO05D003934 8.8e-09 63.5 76 48.7
AT1G09770 Arabidopsis thaliana HOM05D001473 ORTHO05D003934 8.8e-09 63.5 76 48.7
Carub.0001s0911 Capsella rubella HOM05D001473 ORTHO05D003934 8.8e-09 63.5 76 48.7
CARHR009740 Cardamine hirsuta HOM05D001473 ORTHO05D003934 8.8e-09 63.5 76 48.7
CiPaw.04G081100 Carya illinoinensis HOM05D001473 ORTHO05D003934 8.8e-09 63.5 76 50.0
Lj5g0018401 Lotus japonicus HOM05D001473 ORTHO05D003934 8.8e-09 63.5 76 48.7
Aa31LG1G5220 Aethionema arabicum HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
AagrBONN_evm.TU.Sc2ySwM_368.3249 Anthoceros agrestis HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
A06p06440 Brassica napus HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
C05p07840 Brassica napus HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
BolC5t29535H Brassica oleracea HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
BraA06t23855Z Brassica rapa HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
CSS0044349 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
CANSAT54G0715 Cannabis sativa HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
AUR62000484 Chenopodium quinoa HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
AUR62006826 Chenopodium quinoa HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Ca_09455_v3 Cicer arietinum L. HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
ClCG06G009620 Citrullus lanatus HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
MELO3C017522.2 Cucumis melo HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
CsaV3_1G045350 Cucumis sativus L. HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 1.1e-08 63.2 76 48.7
Dinv05754 Davidia involucrata HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Thhalv10006800m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Lj1g0012496 Lotus japonicus HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Lalb_Chr15g0076051 Lupinus albus HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Mapoly0014s0195 Marchantia polymorpha HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Medtr7g115550 Medicago truncatula HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Psat3g006920 Pisum sativum HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Prupe.6G349400 Prunus persica HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
Rhsim05G0175000 Rhododendron simsii HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
SHI00615 Sapria himalayana HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 50.0
Sp1g08360 Schrenkiella parvula HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
TPR.G6939 Trifolium pratense HOM05D001473 ORTHO05D003934 1.1e-08 63.2 76 48.7
AUR62023607 Chenopodium quinoa HOM05D001473 ORTHO05D003934 1.5e-08 62.8 75 49.3
Gohir.A11G247950 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.5e-08 62.8 76 48.7
Sc03g0006700 Simmondsia chinensis HOM05D001473 ORTHO05D003934 1.5e-08 62.8 76 50.0
ATR0736G172 Amborella trichopoda HOM05D001473 ORTHO05D003934 3.3e-08 61.6 76 48.7
A08p34350 Brassica napus HOM05D001473 ORTHO05D003934 4.3e-08 61.2 76 47.4
C08p13180 Brassica napus HOM05D001473 ORTHO05D003934 4.3e-08 61.2 76 47.4
BolC8t48947H Brassica oleracea HOM05D001473 ORTHO05D003934 4.3e-08 61.2 76 47.4
BraA08t35347Z Brassica rapa HOM05D001473 ORTHO05D003934 4.3e-08 61.2 76 47.4
SMO196G0202 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 4.3e-08 61.2 76 47.4
SMO234G0053 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 4.3e-08 61.2 76 47.4
Peaxi162Scf00304g00074 Petunia axillaris HOM05D001473 ORTHO05D003934 7.4e-08 60.5 73 50.7
Pp3c3_17580 Physcomitrium patens HOM05D001473 ORTHO05D003934 9.7e-08 60.1 76 46.1
SMO196G0272 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 9.7e-08 60.1 76 46.1
Lsat_1_v5_gn_5_132420 Lactuca sativa HOM05D001473 ORTHO05D003934 1.7e-07 59.3 70 45.7
CBR_g39826 Chara braunii HOM05D001473 ORTHO05D003934 2.2e-07 58.9 76 44.7
CSS0020922 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 2.8e-07 58.5 63 50.8
Cre03.g197350 Chlamydomonas reinhardtii HOM05D001473 ORTHO05D003934 2.8e-07 58.5 76 44.7
BolC1t01331H Brassica oleracea HOM05D001473 ORTHO05D003934 3.7e-07 58.2 70 48.6
BcaC04g22223 Brassica carinata HOM05D001473 ORTHO05D003934 8.2e-07 57.0 73 46.6
C09p21880 Brassica napus HOM05D001473 ORTHO05D003934 8.2e-07 57.0 73 46.6
BolC9t55093H Brassica oleracea HOM05D001473 ORTHO05D003934 8.2e-07 57.0 73 46.6
CSS0046947 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 8.2e-07 57.0 70 47.1
PRCOL_00004307 Prasinoderma coloniale HOM05D001473 ORTHO05D003934 8.2e-07 57.0 76 42.1
RcHm_v2.0_Chr5g0032281 Rosa chinensis HOM05D001473 ORTHO05D003934 8.2e-07 57.0 72 48.6
Thhalv10001097m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 1.4e-06 56.2 77 45.5
MCO01G096 Micromonas commoda HOM05D001473 ORTHO05D003934 1.4e-06 56.2 75 41.3
MCO01G097 Micromonas commoda HOM05D001473 ORTHO05D003934 1.4e-06 56.2 75 41.3
PSO832G3554 Papaver somniferum HOM05D001473 ORTHO05D003934 1.8e-06 55.8 78 44.9
QL10p043044 Quercus lobata HOM05D001473 ORTHO05D003934 4.1e-06 54.7 76 46.1
A09p17580 Brassica napus HOM05D001473 ORTHO05D003934 5.3e-06 54.3 73 45.2
BraA09t37388Z Brassica rapa HOM05D001473 ORTHO05D003934 5.3e-06 54.3 73 45.2
PSO210G0556 Papaver somniferum HOM05D001473 ORTHO05D003934 5.3e-06 54.3 78 43.6
Sc03g0006090 Simmondsia chinensis HOM05D001473 ORTHO05D003934 5.3e-06 54.3 76 43.4


User provided reference genes

Program Settings