Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1282.1 Capsicum annuum HOM05D000063 ORTHO05D115556 2.7e-42 174.9 86 100.0
CAN.G700.36 Capsicum annuum HOM05D000063 ORTHO05D010509 1.1e-30 136.3 86 83.7
CAN.G337.29 Capsicum annuum HOM05D000063 ORTHO05D000906 8.8e-17 90.1 181 39.8
Nitab4.5_0000461g0080 Nicotiana tabacum HOM05D000063 ORTHO05D000906 6.3e-15 84.0 181 37.0
Peaxi162Scf00285g00084 Petunia axillaris HOM05D000063 ORTHO05D000906 1.8e-14 82.4 181 36.5
Sopen07g033480 Solanum pennellii HOM05D000063 ORTHO05D000906 5.4e-14 80.9 181 36.5
PGSC0003DMG400022187 Solanum tuberosum HOM05D000063 ORTHO05D000906 9.1e-14 80.1 181 36.5
Solyc07g065270.1 Solanum lycopersicum HOM05D000063 ORTHO05D000906 1.2e-13 79.7 181 36.5
Nitab4.5_0003612g0030 Nicotiana tabacum HOM05D000063 ORTHO05D000906 1.3e-12 76.3 181 35.9
MSTRG.6982 Avicennia marina HOM05D000063 ORTHO05D000906 1.8e-09 65.9 179 33.0
Dinv10311 Davidia involucrata HOM05D000063 ORTHO05D000906 4.0e-09 64.7 181 30.9
HanXRQChr08g0230731 Helianthus annuus HOM05D000063 ORTHO05D000906 4.0e-09 64.7 179 32.4
Lj1P884T65 Lonicera japonica HOM05D000063 ORTHO05D000906 4.0e-09 64.7 181 32.0
Dinv40834 Davidia involucrata HOM05D000063 ORTHO05D000906 1.5e-08 62.8 181 31.5
Manes.03G137702 Manihot esculenta HOM05D000063 ORTHO05D000906 1.5e-08 62.8 181 30.9
Manes.03G137851 Manihot esculenta HOM05D000063 ORTHO05D000906 1.5e-08 62.8 181 30.9
COL.COLO4_09784 Corchorus olitorius HOM05D000063 ORTHO05D000906 2.0e-08 62.4 181 29.8
Cpa.g.sc12.194 Carica papaya HOM05D000063 ORTHO05D000906 2.6e-08 62.0 181 30.4
GSVIVG01010007001 Vitis vinifera HOM05D000063 ORTHO05D006898 4.4e-08 61.2 99 40.4
CiPaw.11G200900 Carya illinoinensis HOM05D000063 ORTHO05D000906 5.7e-08 60.8 181 31.5
Gohir.A04G009700 Gossypium hirsutum HOM05D000063 ORTHO05D000906 7.5e-08 60.5 180 31.7
QL08p005523 Quercus lobata HOM05D000063 ORTHO05D000906 9.8e-08 60.1 180 30.0
Thecc.07G022500 Theobroma cacao HOM05D000063 ORTHO05D000906 9.8e-08 60.1 181 29.8
CANSAT11G1774 Cannabis sativa HOM05D000063 ORTHO05D000906 1.3e-07 59.7 181 29.3
MBI19_g33775_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D000906 1.3e-07 59.7 161 31.1
ECA246G2389 Erigeron canadensis HOM05D000063 ORTHO05D000906 1.7e-07 59.3 179 29.6
Sed0012924 Sechium edule HOM05D000063 ORTHO05D000906 2.2e-07 58.9 181 30.9
MSTRG.14471 Avicennia marina HOM05D000063 ORTHO05D000906 3.7e-07 58.2 179 30.2
CSS0037707 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D000906 3.7e-07 58.2 178 32.0
Duzib133G1024 Durio zibethinus HOM05D000063 ORTHO05D000906 3.7e-07 58.2 181 30.4
Gohir.A01G087100 Gossypium hirsutum HOM05D000063 ORTHO05D000906 3.7e-07 58.2 39 82.1
CAN.G973.3 Capsicum annuum HOM05D000063 ORTHO05D010509 4.9e-07 57.8 39 79.5
Hma1.2p1_1199F.1_g266490 Hydrangea macrophylla HOM05D000063 ORTHO05D000906 4.9e-07 57.8 181 30.4
Rhsim04G0014800 Rhododendron simsii HOM05D000063 ORTHO05D000906 4.9e-07 57.8 180 30.0
Haze_09786 Corylus avellana HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Gohir.A07G167200 Gossypium hirsutum HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Gohir.D07G172600 Gossypium hirsutum HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Gorai.001G192800 Gossypium raimondii HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Manes.15G063500 Manihot esculenta HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Nn1g03250 Nelumbo nucifera HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Nn1g07437 Nelumbo nucifera HOM05D000063 ORTHO05D000906 6.3e-07 57.4 39 79.5
Gohir.D01G073300 Gossypium hirsutum HOM05D000063 ORTHO05D000906 8.3e-07 57.0 39 79.5
Gorai.002G096300 Gossypium raimondii HOM05D000063 ORTHO05D000906 8.3e-07 57.0 39 79.5
Nitab4.5_0002669g0020 Nicotiana tabacum HOM05D000063 ORTHO05D000906 8.3e-07 57.0 181 28.7
Haze_12693 Corylus avellana HOM05D000063 ORTHO05D000906 1.1e-06 56.6 181 29.8
Eucgr.A01051 Eucalyptus grandis HOM05D000063 ORTHO05D000906 1.1e-06 56.6 39 79.5
Oeu059035.1 Olea europaea HOM05D000063 ORTHO05D000906 1.1e-06 56.6 39 76.9
Potri.001G361700 Populus trichocarpa HOM05D000063 ORTHO05D000906 1.1e-06 56.6 181 28.2
COL.COLO4_33024 Corchorus olitorius HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
Duzib211G0068 Durio zibethinus HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
Oeu019608.1 Olea europaea HOM05D000063 ORTHO05D000906 1.4e-06 56.2 181 30.4
PSO541G4590 Papaver somniferum HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
PSO675G0038 Papaver somniferum HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
Thecc.01G190100 Theobroma cacao HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
TWI38G1196 Tripterygium wilfordii HOM05D000063 ORTHO05D000906 1.4e-06 56.2 181 29.8
TAR627G0475 Trochodendron aralioides HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
GSVIVG01030047001 Vitis vinifera HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
GSVIVG01037777001 Vitis vinifera HOM05D000063 ORTHO05D000906 1.4e-06 56.2 39 76.9
Ciclev10007927m.g Citrus clementina HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 74.4
Gohir.A11G150000 Gossypium hirsutum HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 76.9
Gohir.D11G156500 Gossypium hirsutum HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 76.9
Gorai.007G167000 Gossypium raimondii HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 76.9
Oeu029954.1 Olea europaea HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 74.4
Phvul.008G286000 Phaseolus vulgaris HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 76.9
SEGI_29029 Sequoiadendron giganteum HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 74.4
VMungo0647G1225 Vigna mungo HOM05D000063 ORTHO05D000906 1.8e-06 55.8 39 76.9
Gohir.D05G378300 Gossypium hirsutum HOM05D000063 ORTHO05D000906 2.4e-06 55.5 38 78.9
Gorai.009G446100 Gossypium raimondii HOM05D000063 ORTHO05D000906 2.4e-06 55.5 38 78.9
Os03g0193000 Oryza sativa ssp. japonica HOM05D000063 ORTHO05D000906 2.4e-06 55.5 39 71.8
ClCG02G009400 Citrullus lanatus HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 76.9
MELO3C025987.2 Cucumis melo HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 76.9
CsaV3_6G009410 Cucumis sativus L. HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 76.9
Dinv07860 Davidia involucrata HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 74.4
Duzib138G1821 Durio zibethinus HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 74.4
Duzib213G0962 Durio zibethinus HOM05D000063 ORTHO05D000906 3.1e-06 55.1 37 78.4
Duzib268G1067 Durio zibethinus HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 74.4
Prupe.4G233000 Prunus persica HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 76.9
THA.LOC104817838 Tarenaya hassleriana HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 74.4
Zm00001eb027720 Zea mays HOM05D000063 ORTHO05D000906 3.1e-06 55.1 39 71.8
Actinidia39071 Actinidia chinensis HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
AL1G58260 Arabidopsis lyrata HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
AT1G50600 Arabidopsis thaliana HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
arahy.Tifrunner.gnm1.ann1.59VQSP Arachis hypogaea HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
arahy.Tifrunner.gnm1.ann1.P9UX8E Arachis hypogaea HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
BcaB02g11163 Brassica carinata HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
BcaB07g33495 Brassica carinata HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
BcaC08g43228 Brassica carinata HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
A06p03020 Brassica napus HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
C06p05760 Brassica napus HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
BolC6t35686H Brassica oleracea HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
BraA06t23514Z Brassica rapa HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
Carub.0001s3964 Capsella rubella HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
Glyma.14G006900 Glycine max HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
Hma1.2p1_0036F.1_g022740 Hydrangea macrophylla HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
Hma1.2p1_0133F.1_g061290 Hydrangea macrophylla HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
MBI16_g11561_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 76.9
Nitab4.5_0002877g0010 Nicotiana tabacum HOM05D000063 ORTHO05D000906 4.1e-06 54.7 181 28.2
Oeu057084.1 Olea europaea HOM05D000063 ORTHO05D000906 4.1e-06 54.7 38 78.9
Sabra16G0238500 Salix brachista HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
Sed0021761 Sechium edule HOM05D000063 ORTHO05D000906 4.1e-06 54.7 38 76.3
TWI39G1303 Tripterygium wilfordii HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 74.4
TWI75G1752 Tripterygium wilfordii HOM05D000063 ORTHO05D000906 4.1e-06 54.7 39 76.9
Aa31LG10G3740 Aethionema arabicum HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 71.8
Aqoxy4G02212 Aquilegia oxysepala HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 74.4
CSS0031058 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 74.4
Cc00_g06820 Coffea canephora HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 71.8
Dinv05836 Davidia involucrata HOM05D000063 ORTHO05D000906 5.4e-06 54.3 40 72.5
Thhalv10011379m.g Eutrema salsugineum HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 71.8
Glyma.02G306200 Glycine max HOM05D000063 ORTHO05D000906 5.4e-06 54.3 38 76.3
LjContig00081g0007905 Lotus japonicus HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 74.4
Sp1g37420 Schrenkiella parvula HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 71.8
TAR629G3375 Trochodendron aralioides HOM05D000063 ORTHO05D000906 5.4e-06 54.3 39 71.8
HPP92_001836 Vanilla planifolia HOM05D000063 ORTHO05D000906 5.4e-06 54.3 38 73.7
HanXRQChr11g0333981 Helianthus annuus HOM05D000063 ORTHO05D000906 7.0e-06 53.9 39 74.4
Lalb_Chr04g0247251 Lupinus albus HOM05D000063 ORTHO05D000906 7.0e-06 53.9 39 74.4
Lalb_Chr04g0247981 Lupinus albus HOM05D000063 ORTHO05D000906 7.0e-06 53.9 39 74.4
Manes.12G061900 Manihot esculenta HOM05D000063 ORTHO05D000906 7.0e-06 53.9 39 71.8
Thecc.06G236500 Theobroma cacao HOM05D000063 ORTHO05D000906 7.0e-06 53.9 182 29.7
BcaC05g27408 Brassica carinata HOM05D000063 ORTHO05D096148 9.2e-06 53.5 166 29.5
Cpa.g.sc136.17 Carica papaya HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
Ca_06461_v3 Cicer arietinum L. HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 71.8
ECA236G0029 Erigeron canadensis HOM05D000063 ORTHO05D000906 9.2e-06 53.5 178 29.2
FvH4_3g24030 Fragaria vesca HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
FAN11G1513 Fragaria x ananassa HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
FAN16G2967 Fragaria x ananassa HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
FAN21G0194 Fragaria x ananassa HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
FAN25G1598 Fragaria x ananassa HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
FAN25G2173 Fragaria x ananassa HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
MD09G1121700 Malus domestica HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
Medtr5g097480 Medicago truncatula HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 71.8
Phvul.008G275500 Phaseolus vulgaris HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
RcHm_v2.0_Chr5g0042621 Rosa chinensis HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4
TPR.G15069 Trifolium pratense HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 71.8
VMungo0647G1081 Vigna mungo HOM05D000063 ORTHO05D000906 9.2e-06 53.5 39 74.4


User provided reference genes

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