Gene: Cc00_g06820

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g06820
  • Transcript Identifier Cc00_g06820.1
  • Gene Type Coding gene
  • Location chr0 : 53392818-53394452 : positive

Gene Family Information

  • ID HOM05D000063
  • #Genes/#Species 3996/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q8GVE1
  • UniProtKB F6HHL9
  • UniProtKB I1M692
  • UniProtKB B9IAQ7
  • UniProtKB Q9LDL7
  • UniProtKB Q8H125
  • id GSCOCG00007412001

Descriptions

  • Description Scarecrow-like transcription factor PAT1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT5G48150
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G48150
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G50600
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc07g065270.1
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT5G48150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G48150
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G48150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G48150
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G50600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005202 Transcription factor GRAS
Mapman id Description
15.5.12 RNA biosynthesis.transcriptional regulation.transcription factor (GRAS)