Gene: AT1G50600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G50600
  • Transcript Identifier AT1G50600.2
  • Gene Type Coding gene
  • Location Chr1 : 18737398-18739559 : negative

Gene Family Information

  • ID HOM05D000063
  • #Genes/#Species 3996/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G50600.2
  • symbol SCL5
  • uniprot Q8H125

Descriptions

  • Description scarecrow-like 5
  • Computational description scarecrow-like 5 (SCL5); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 3554 Blast hits to 3276 proteins in 342 species: Archae - 0; Bacteria - 9; Metazoa - 107; Fungi - 18; Plants - 2497; Viruses - 1; Other Eukaryotes - 922 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005202 Transcription factor GRAS
Mapman id Description
15.5.12 RNA biosynthesis.transcriptional regulation.transcription factor (GRAS)