Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 1.5e-217 759.2 379 100.0
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 9.1e-199 696.8 380 91.8
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 6.5e-197 690.6 380 91.1
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 8.0e-195 683.7 380 90.0
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 3.8e-181 638.3 398 82.9
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 1.1e-180 636.7 380 84.7
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.8e-175 619.4 366 86.3
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.8e-155 552.4 358 79.6
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 8.1e-147 524.2 380 68.9
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.4e-146 523.5 380 69.5
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 4.4e-145 518.5 379 68.1
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 6.4e-144 514.6 380 70.0
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 6.4e-144 514.6 380 68.9
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.1e-143 513.8 380 69.2
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 2.7e-142 509.2 379 67.3
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 5.1e-141 505.0 414 63.3
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 8.6e-141 504.2 398 64.3
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.4e-138 496.1 364 69.0
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 2.6e-137 492.7 376 64.6
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 3.4e-137 492.3 379 65.4
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 2.2e-136 489.6 374 67.4
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.8e-136 488.8 364 68.1
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 5.4e-135 485.0 381 66.9
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.3e-133 480.3 380 63.7
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 8.7e-133 477.6 378 62.7
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 8.7e-133 477.6 378 62.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.5e-132 476.9 356 66.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.9e-132 476.5 377 62.1
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 2.5e-132 476.1 377 63.1
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.3e-132 475.3 377 63.4
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 1.6e-131 473.4 375 62.9
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 2.1e-131 473.0 379 62.5
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 2.8e-131 472.6 380 62.6
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.8e-131 472.6 378 62.7
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.8e-131 472.6 362 66.9
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 4.8e-131 471.9 375 61.9
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.8e-131 471.9 383 62.7
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.8e-131 471.9 383 62.4
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.4e-130 470.3 378 61.1
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.4e-130 469.5 380 60.8
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 3.1e-130 469.2 380 62.6
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 4.0e-130 468.8 341 67.7
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.2e-129 467.2 381 62.5
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 2.0e-129 466.5 383 61.9
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 2.6e-129 466.1 379 62.0
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 7.6e-129 464.5 367 64.9
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.3e-128 463.8 350 66.9
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.9e-127 459.9 380 60.8
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 7.1e-127 458.0 380 60.0
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.6e-126 456.8 380 59.5
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.6e-126 456.8 378 60.6
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 1.0e-125 454.1 380 59.2
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.3e-125 453.8 353 63.5
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 3.9e-125 452.2 380 60.5
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 5.1e-125 451.8 377 59.9
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 1.9e-124 449.9 355 62.8
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.6e-124 448.4 380 60.3
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 5.6e-124 448.4 380 59.7
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 9.6e-124 447.6 378 60.1
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 4.8e-123 445.3 380 58.4
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 1.8e-122 443.4 379 58.3
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 3.1e-122 442.6 377 59.4
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 5.3e-122 441.8 353 65.7
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 5.3e-122 441.8 353 65.7
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.2e-121 440.7 304 73.0
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 3.4e-121 439.1 381 59.1
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.3e-120 437.2 350 61.7
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 2.2e-120 436.4 381 57.2
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.9e-120 436.0 326 65.6
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 6.4e-120 434.9 377 58.9
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.1e-119 434.1 381 57.7
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.1e-119 434.1 377 58.9
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.4e-119 433.0 377 58.4
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.2e-119 432.6 381 58.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 2.1e-118 429.9 381 57.5
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 3.5e-118 429.1 377 57.6
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 3.5e-118 429.1 388 58.0
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 4.6e-118 428.7 380 57.1
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 4.6e-118 428.7 352 61.1
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 6.0e-118 428.3 380 56.6
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.0e-117 427.6 381 57.0
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.3e-117 427.2 377 56.2
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.8e-117 426.8 381 57.0
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 6.7e-117 424.9 373 56.3
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.5e-116 423.7 380 56.6
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.9e-116 423.3 368 57.3
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.5e-116 422.9 419 52.5
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 4.8e-115 418.7 378 57.1
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 8.2e-115 417.9 350 59.4
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 7.6e-113 411.4 380 56.1
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 3.2e-111 406.0 478 46.9
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 3.3e-108 396.0 379 57.5
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 1.6e-107 393.7 383 52.2
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.1e-106 391.0 353 55.5
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.5e-105 387.1 281 68.0
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.2e-102 377.5 353 53.5
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 7.9e-94 348.2 381 48.8
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 9.1e-90 334.7 336 52.4
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 4.2e-87 325.9 398 45.0
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.7e-86 323.2 268 57.5
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 1.1e-84 317.8 386 46.1
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 2.0e-81 307.0 231 63.6
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.0e-80 304.7 221 64.3
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.3e-80 304.3 353 45.9
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 8.2e-75 285.0 204 68.6
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 4.7e-70 269.2 229 58.5
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 7.0e-66 255.4 407 39.8
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 3.5e-65 253.1 419 37.7
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 5.2e-61 239.2 355 42.0
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.9e-61 238.4 233 54.5
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 9.5e-55 218.4 273 45.8
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 3.4e-52 209.9 306 40.8
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 3.9e-48 196.4 163 55.2
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 3.9e-48 196.4 249 43.4
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 3.7e-43 179.9 160 59.4
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 3.7e-43 179.9 160 59.4
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.9e-39 167.5 170 50.0
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.1e-34 151.8 148 50.0
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 1.9e-34 151.0 194 43.3
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 3.0e-32 143.7 150 49.3
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 2.8e-30 137.1 156 46.2
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.6e-30 136.7 115 54.8
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 2.7e-25 120.6 86 67.4
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.2e-20 105.1 136 47.1
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.5e-20 104.8 76 65.8
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 3.2e-18 97.1 177 35.6
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.6e-17 94.7 67 65.7
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.9e-13 79.3 52 75.0
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.0e-12 77.8 52 73.1
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.8e-11 73.6 87 46.0


User provided reference genes

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