Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.1e-209 733.0 366 100.0
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 2.7e-163 578.9 363 82.6
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 3.3e-161 572.0 368 79.6
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.0e-159 567.0 364 79.4
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 3.6e-152 542.0 368 76.1
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 4.7e-152 541.6 365 76.7
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.1e-103 380.9 367 57.8
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 7.9e-99 364.8 360 54.2
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 9.7e-97 357.8 367 52.9
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 2.6e-94 349.7 368 52.7
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 7.2e-92 341.7 366 51.9
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.6e-91 340.5 367 52.6
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 3.6e-91 339.3 367 52.6
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 7.9e-91 338.2 342 53.5
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.0e-90 337.8 366 53.6
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 5.1e-90 335.5 357 52.1
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.1e-89 334.3 367 51.5
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 4.4e-89 332.4 372 51.3
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 7.4e-89 331.6 366 52.2
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 2.4e-87 326.6 362 48.9
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 1.2e-86 324.3 365 50.7
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.5e-86 323.9 367 49.6
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.0e-86 323.6 369 51.2
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 2.0e-86 323.6 383 50.9
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 2.0e-86 323.6 366 48.9
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 2.6e-86 323.2 369 49.9
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 7.7e-86 321.6 367 48.8
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 3.8e-85 319.3 365 51.2
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 3.8e-85 319.3 365 50.1
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 2.1e-83 313.5 350 51.4
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 2.1e-83 313.5 343 51.0
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 2.7e-83 313.2 365 49.6
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 3.6e-83 312.8 369 49.6
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 6.1e-83 312.0 369 49.9
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 1.4e-82 310.8 369 49.1
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 1.8e-82 310.5 366 47.5
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 6.7e-82 308.5 366 48.6
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.1e-81 307.8 364 46.7
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.5e-81 307.4 392 47.7
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 4.4e-81 305.8 367 48.2
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 1.7e-80 303.9 366 46.7
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 8.2e-80 301.6 367 49.0
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 2.4e-79 300.1 365 47.1
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 3.1e-79 299.7 367 47.4
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 9.1e-79 298.1 414 44.2
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.6e-78 297.4 366 47.3
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 5.9e-78 295.4 363 46.6
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 5.9e-78 295.4 363 46.8
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 5.9e-78 295.4 360 47.8
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 7.7e-78 295.0 368 45.1
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 2.2e-77 293.5 364 48.1
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.8e-77 292.7 361 46.8
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.0e-77 292.4 364 47.0
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 1.5e-76 290.8 366 46.2
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.5e-76 290.0 363 46.8
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.2e-76 288.5 363 46.6
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 2.7e-75 286.6 365 46.3
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 2.7e-75 286.6 363 46.3
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 1.2e-73 281.2 359 43.5
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.5e-73 280.8 378 44.4
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 3.3e-73 279.6 361 46.0
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 5.7e-73 278.9 381 44.9
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 9.7e-73 278.1 365 45.2
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 2.2e-72 276.9 364 43.7
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 4.8e-72 275.8 381 43.8
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 4.8e-72 275.8 368 44.8
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.4e-71 273.5 307 51.5
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.7e-70 270.0 323 48.3
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 3.5e-70 269.6 323 48.6
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 2.5e-68 263.5 373 44.0
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 1.2e-67 261.2 343 43.1
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 2.3e-66 256.9 369 43.6
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 6.8e-66 255.4 379 42.7
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 3.7e-64 249.6 388 40.7
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.7e-64 249.6 374 41.7
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 6.3e-64 248.8 369 44.2
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 6.3e-64 248.8 266 50.4
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 4.1e-63 246.1 263 50.2
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 5.4e-63 245.7 342 42.1
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 5.4e-63 245.7 390 40.5
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 5.4e-63 245.7 341 42.5
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 7.0e-63 245.4 370 41.9
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 2.9e-61 240.0 361 41.3
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 6.5e-61 238.8 386 42.0
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 2.5e-60 236.9 342 42.7
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 2.5e-60 236.9 340 40.3
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 2.5e-60 236.9 340 40.3
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 3.2e-60 236.5 343 42.6
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 7.2e-60 235.3 343 41.7
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 7.2e-60 235.3 235 52.8
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 9.5e-60 235.0 365 41.4
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 1.2e-59 234.6 342 39.8
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 3.6e-59 233.0 341 41.3
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 3.6e-59 233.0 360 39.2
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 6.1e-59 232.3 241 51.9
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 1.0e-58 231.5 366 40.4
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 4.9e-56 222.6 286 45.5
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.8e-55 220.7 229 52.0
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 7.0e-55 218.8 299 42.5
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 1.6e-54 217.6 365 37.0
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 1.0e-53 214.9 241 50.2
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 2.5e-52 210.3 269 43.5
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 3.3e-52 209.9 259 46.7
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 9.5e-52 208.4 340 38.5
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 9.5e-52 208.4 274 45.6
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.6e-43 181.0 263 40.3
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 8.0e-43 178.7 223 45.3
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.4e-39 167.2 206 48.5
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.2e-38 164.9 235 40.9
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 6.0e-38 162.5 237 40.5
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.3e-37 161.4 198 49.0
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 5.6e-36 156.0 234 38.5
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 7.3e-36 155.6 286 35.0
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.7e-35 152.9 234 39.3
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.4e-34 151.4 208 45.7
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.8e-33 146.0 172 44.8
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 5.8e-33 146.0 168 48.8
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.9e-32 143.7 128 53.9
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 3.5e-30 136.7 126 54.8
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 3.5e-30 136.7 222 36.0
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 3.5e-30 136.7 174 43.1
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 1.6e-22 111.3 213 33.8
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 7.3e-20 102.4 80 65.0
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 2.7e-14 84.0 242 28.1
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 3.9e-13 80.1 122 43.4
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 9.9e-09 65.5 129 34.9


User provided reference genes

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