Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 2.5e-114 416.0 238 100.0
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 2.5e-114 416.0 238 100.0
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 2.4e-96 356.3 243 87.7
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 2.4e-96 356.3 243 87.7
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 2.3e-91 339.7 251 82.5
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 6.2e-89 331.6 246 81.7
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 1.1e-88 330.9 247 79.8
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 3.7e-81 305.8 239 73.6
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 2.6e-79 299.7 248 75.4
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 3.2e-77 292.7 243 74.1
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 5.1e-75 285.4 247 74.1
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 9.4e-69 264.6 269 65.4
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 3.0e-59 233.0 258 62.8
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 5.7e-50 202.2 252 50.0
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 7.5e-50 201.8 259 51.4
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 9.7e-50 201.4 262 51.5
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 2.8e-49 199.9 276 47.5
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.1e-48 198.0 249 51.4
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.4e-48 197.6 275 49.5
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 1.8e-48 197.2 276 47.1
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 2.4e-48 196.8 300 46.0
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 4.1e-48 196.1 273 48.0
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 1.2e-47 194.5 265 47.2
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 1.6e-47 194.1 251 49.4
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 1.6e-47 194.1 263 47.1
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.0e-47 193.7 284 48.2
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 2.7e-47 193.4 270 47.4
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 7.7e-47 191.8 297 50.2
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 1.3e-46 191.0 253 51.0
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.7e-46 190.7 275 49.5
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.9e-45 187.2 256 49.2
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 1.9e-45 187.2 262 48.9
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.9e-45 187.2 330 42.7
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 3.2e-45 186.4 278 45.7
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 4.2e-45 186.0 255 49.8
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 5.5e-45 185.7 261 48.7
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.2e-44 184.5 255 49.8
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.6e-44 184.1 274 45.6
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.1e-44 183.7 305 44.9
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 2.1e-44 183.7 294 44.2
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.7e-44 182.6 268 46.6
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.0e-43 181.4 249 47.8
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.8e-43 180.6 262 46.6
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 6.8e-43 178.7 290 44.1
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 8.8e-43 178.3 249 47.4
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.8e-43 178.3 249 47.8
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 2.0e-42 177.2 260 47.7
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 2.0e-42 177.2 312 42.0
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 4.4e-42 176.0 289 43.9
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 9.8e-42 174.9 248 49.6
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 9.8e-42 174.9 248 49.6
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 2.8e-41 173.3 251 47.0
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 2.8e-41 173.3 268 45.1
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 6.3e-41 172.2 275 45.8
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 2.4e-40 170.2 237 47.7
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 4.1e-40 169.5 246 46.3
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 4.1e-40 169.5 269 45.7
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 7.0e-40 168.7 244 48.0
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 9.1e-40 168.3 265 44.2
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 9.1e-40 168.3 274 46.4
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 2.7e-39 166.8 318 40.9
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 3.5e-39 166.4 242 47.5
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 7.7e-39 165.2 266 49.6
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.7e-38 164.1 309 40.1
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 3.8e-38 162.9 297 43.1
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 8.6e-38 161.8 264 43.2
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.5e-37 161.0 270 43.7
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.5e-37 161.0 270 44.4
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.9e-37 160.6 305 45.6
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 2.5e-37 160.2 265 42.6
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 2.5e-37 160.2 270 43.7
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 7.2e-37 158.7 271 43.2
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 7.2e-37 158.7 270 43.3
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 7.2e-37 158.7 282 43.6
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 7.2e-37 158.7 247 44.5
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 7.2e-37 158.7 247 46.2
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 7.2e-37 158.7 234 48.3
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 9.5e-37 158.3 271 43.2
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 9.5e-37 158.3 225 47.6
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 2.1e-36 157.1 282 43.3
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 2.8e-36 156.8 270 43.3
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 3.6e-36 156.4 329 37.7
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 3.0e-35 153.3 286 43.7
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 2.6e-34 150.2 304 42.8
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 4.4e-34 149.4 310 42.6
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 9.8e-34 148.3 312 42.0
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.3e-33 147.9 284 39.8
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 4.9e-33 146.0 310 42.3
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 2.0e-31 140.6 235 43.4
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.7e-30 137.5 226 44.2
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.8e-28 130.2 123 60.2
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 1.0e-27 128.3 290 37.6
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 4.0e-27 126.3 211 41.7
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.2e-26 124.8 298 36.6
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.5e-26 124.4 331 34.7
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.6e-26 123.6 158 48.1
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.6e-26 123.6 262 38.9
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 3.7e-25 119.8 265 37.7
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 3.2e-24 116.7 268 36.6
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 4.1e-24 116.3 233 38.2
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.2e-23 114.8 213 41.8
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.0e-22 111.7 266 35.3
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.0e-22 111.7 221 41.6
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 1.7e-22 110.9 65 76.9
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 1.7e-22 110.9 68 75.0
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 3.3e-21 106.7 267 35.2
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.1e-19 101.7 210 38.1
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.1e-19 100.1 67 74.6
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.4e-16 90.5 243 35.4
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 4.1e-16 89.7 120 46.7
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.7e-15 87.0 224 33.5
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.3e-14 84.7 198 37.4
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.9e-14 83.2 157 40.1
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 8.6e-14 82.0 179 38.5
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 2.1e-12 77.4 117 45.3
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 2.6e-10 70.5 106 42.5
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.2e-09 67.4 104 41.3
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 1.4e-08 64.7 42 83.3
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 9.2e-08 62.0 42 76.2
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 9.2e-08 62.0 42 76.2
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 2.7e-07 60.5 142 35.9
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.9e-06 56.6 193 35.2


User provided reference genes

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