Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p66220 Brassica napus HOM05D001843 ORTHO05D022026 4.1e-122 441.4 224 100.0
C09p66430 Brassica napus HOM05D001843 ORTHO05D022026 4.1e-122 441.4 224 100.0
C09p66600 Brassica napus HOM05D001843 ORTHO05D022026 1.5e-121 439.5 224 99.6
BolC9t59443H Brassica oleracea HOM05D001843 ORTHO05D022026 9.4e-119 430.3 226 97.8
C09p66350 Brassica napus HOM05D001843 ORTHO05D022026 1.8e-117 426.0 234 94.9
C09p66510 Brassica napus HOM05D001843 ORTHO05D022026 6.4e-83 311.2 187 90.4
A10p20300 Brassica napus HOM05D001843 ORTHO05D003411 6.6e-40 168.3 263 47.9
BraA10t44101Z Brassica rapa HOM05D001843 ORTHO05D003411 6.6e-40 168.3 263 47.9
C09p56900 Brassica napus HOM05D001843 ORTHO05D003411 8.7e-40 167.9 263 47.9
BolC9t58544H Brassica oleracea HOM05D001843 ORTHO05D003411 8.7e-40 167.9 263 47.9
Sp6g25010 Schrenkiella parvula HOM05D001843 ORTHO05D003411 2.0e-36 156.8 262 45.8
Thhalv10012551m.g Eutrema salsugineum HOM05D001843 ORTHO05D003411 4.9e-35 152.1 262 44.7
BraA02t05505Z Brassica rapa HOM05D001843 ORTHO05D003411 1.0e-32 144.4 263 42.6
A02p05540 Brassica napus HOM05D001843 ORTHO05D003411 3.0e-32 142.9 263 42.2
BNapus_Darmor_BZH_scaffold_38p02470 Brassica napus HOM05D001843 ORTHO05D003411 3.0e-32 142.9 251 43.4
AL6G30890 Arabidopsis lyrata HOM05D001843 ORTHO05D003411 7.4e-31 138.3 262 41.2
Carub.0006s1774 Capsella rubella HOM05D001843 ORTHO05D003411 3.7e-30 136.0 253 43.1
AT5G19400 Arabidopsis thaliana HOM05D001843 ORTHO05D003411 1.2e-28 131.0 262 41.6
Aa31LG1G8820 Aethionema arabicum HOM05D001843 ORTHO05D003411 3.8e-27 125.9 262 39.7
CARHR193550 Cardamine hirsuta HOM05D001843 ORTHO05D003411 9.3e-26 121.3 266 38.0
THA.LOC104799125 Tarenaya hassleriana HOM05D001843 ORTHO05D003411 8.7e-24 114.8 240 38.8
Atru.chr3.2892 Acer truncatum HOM05D001843 ORTHO05D003411 1.3e-19 100.9 250 37.6
Ciclev10014151m.g Citrus clementina HOM05D001843 ORTHO05D003411 1.3e-19 100.9 251 36.3
THA.LOC104811190 Tarenaya hassleriana HOM05D001843 ORTHO05D003411 2.2e-19 100.1 237 37.6
Gohir.A05G070900 Gossypium hirsutum HOM05D001843 ORTHO05D003411 6.5e-19 98.6 251 33.5
Nn7g36713 Nelumbo nucifera HOM05D001843 ORTHO05D003411 6.5e-19 98.6 248 35.9
Cpa.g.sc157.60 Carica papaya HOM05D001843 ORTHO05D003411 8.5e-19 98.2 252 36.9
Lalb_Chr04g0249221 Lupinus albus HOM05D001843 ORTHO05D003411 1.4e-18 97.4 261 35.2
CiPaw.13G150400 Carya illinoinensis HOM05D001843 ORTHO05D003411 5.5e-18 95.5 251 36.3
CiPaw.14G113000 Carya illinoinensis HOM05D001843 ORTHO05D003411 9.3e-18 94.7 251 36.3
Haze_23231 Corylus avellana HOM05D001843 ORTHO05D003411 1.6e-17 94.0 253 34.8
Duzib168G0131 Durio zibethinus HOM05D001843 ORTHO05D003411 2.1e-17 93.6 251 33.9
Glyma.20G040700 Glycine max HOM05D001843 ORTHO05D003411 2.1e-17 93.6 243 37.4
Medtr0175s0030 Medicago truncatula HOM05D001843 ORTHO05D003411 2.1e-17 93.6 262 34.0
RcHm_v2.0_Chr5g0050561 Rosa chinensis HOM05D001843 ORTHO05D003411 2.1e-17 93.6 249 36.5
Sed0022809 Sechium edule HOM05D001843 ORTHO05D003411 2.1e-17 93.6 248 35.1
Psat5g197600 Pisum sativum HOM05D001843 ORTHO05D003411 2.7e-17 93.2 249 35.3
TAR623G1343 Trochodendron aralioides HOM05D001843 ORTHO05D003411 3.6e-17 92.8 254 34.6
ClCG03G012560 Citrullus lanatus HOM05D001843 ORTHO05D003411 4.6e-17 92.4 248 34.7
CsaV3_1G043450 Cucumis sativus L. HOM05D001843 ORTHO05D003411 4.6e-17 92.4 248 33.9
FvH4_3g27840 Fragaria vesca HOM05D001843 ORTHO05D003411 4.6e-17 92.4 249 35.3
FAN11G3218 Fragaria x ananassa HOM05D001843 ORTHO05D003411 4.6e-17 92.4 249 35.3
Lalb_Chr10g0106241 Lupinus albus HOM05D001843 ORTHO05D003411 4.6e-17 92.4 246 33.3
Lalb_Chr17g0347901 Lupinus albus HOM05D001843 ORTHO05D003411 4.6e-17 92.4 252 35.7
PSO339G3633 Papaver somniferum HOM05D001843 ORTHO05D003411 4.6e-17 92.4 249 33.7
GSVIVG01037278001 Vitis vinifera HOM05D001843 ORTHO05D003411 4.6e-17 92.4 253 35.6
Gohir.A09G110450 Gossypium hirsutum HOM05D001843 ORTHO05D003411 1.0e-16 91.3 248 33.5
Gorai.009G074900 Gossypium raimondii HOM05D001843 ORTHO05D003411 1.0e-16 91.3 248 33.5
Duzib150G0706 Durio zibethinus HOM05D001843 ORTHO05D003411 1.3e-16 90.9 255 32.9
Gohir.D05G073800 Gossypium hirsutum HOM05D001843 ORTHO05D003411 1.3e-16 90.9 248 33.5
PSO384G4955 Papaver somniferum HOM05D001843 ORTHO05D003411 1.3e-16 90.9 249 34.1
QL01p017120 Quercus lobata HOM05D001843 ORTHO05D003411 1.3e-16 90.9 252 34.5
COL.COLO4_32762 Corchorus olitorius HOM05D001843 ORTHO05D003411 1.8e-16 90.5 167 41.3
Dinv15036 Davidia involucrata HOM05D001843 ORTHO05D003411 1.8e-16 90.5 253 36.0
Thecc.09G248200 Theobroma cacao HOM05D001843 ORTHO05D003411 1.8e-16 90.5 252 34.1
MELO3C015113.2 Cucumis melo HOM05D001843 ORTHO05D003411 3.0e-16 89.7 248 33.5
Gorai.013G253600 Gossypium raimondii HOM05D001843 ORTHO05D003411 3.9e-16 89.4 253 32.4
Sabra16G0169700 Salix brachista HOM05D001843 ORTHO05D003411 3.9e-16 89.4 166 41.0
TPR.G24344 Trifolium pratense HOM05D001843 ORTHO05D003411 3.9e-16 89.4 250 35.6
FAN16G1122 Fragaria x ananassa HOM05D001843 ORTHO05D003411 5.1e-16 89.0 249 34.9
Prupe.4G265800 Prunus persica HOM05D001843 ORTHO05D003411 5.1e-16 89.0 242 36.0
Gohir.A13G218800 Gossypium hirsutum HOM05D001843 ORTHO05D003411 6.7e-16 88.6 253 32.4
Gohir.D13G222500 Gossypium hirsutum HOM05D001843 ORTHO05D003411 6.7e-16 88.6 253 32.4
arahy.Tifrunner.gnm1.ann1.7N5RT2 Arachis hypogaea HOM05D001843 ORTHO05D003411 8.7e-16 88.2 250 36.0
arahy.Tifrunner.gnm1.ann1.N51291 Arachis hypogaea HOM05D001843 ORTHO05D003411 1.1e-15 87.8 250 36.0
Glyma.07G231800 Glycine max HOM05D001843 ORTHO05D003411 1.1e-15 87.8 249 36.1
Lj6g0018672 Lotus japonicus HOM05D001843 ORTHO05D003411 1.1e-15 87.8 250 34.8
Aqoxy2G00385 Aquilegia oxysepala HOM05D001843 ORTHO05D003411 1.5e-15 87.4 251 33.5
DCAR_013639 Daucus carota HOM05D001843 ORTHO05D003411 1.5e-15 87.4 253 33.2
FAN21G1175 Fragaria x ananassa HOM05D001843 ORTHO05D003411 1.5e-15 87.4 249 35.7
FAN25G3852 Fragaria x ananassa HOM05D001843 ORTHO05D003411 1.5e-15 87.4 249 34.5
PGR102G3331 Punica granatum HOM05D001843 ORTHO05D003411 1.5e-15 87.4 250 34.8
TAR633G1910 Trochodendron aralioides HOM05D001843 ORTHO05D003411 1.5e-15 87.4 167 38.3
Eucgr.C04149 Eucalyptus grandis HOM05D001843 ORTHO05D003411 1.9e-15 87.0 257 33.9
MD03G1165600 Malus domestica HOM05D001843 ORTHO05D003411 1.9e-15 87.0 248 35.9
MD11G1184900 Malus domestica HOM05D001843 ORTHO05D003411 1.9e-15 87.0 246 35.8
LjContig00564g0007413 Lotus japonicus HOM05D001843 ORTHO05D003411 2.5e-15 86.7 254 34.3
MBI14_g16108_MAGBIO Magnolia biondii HOM05D001843 ORTHO05D003411 2.5e-15 86.7 247 32.4
Manes.02G139200 Manihot esculenta HOM05D001843 ORTHO05D003411 2.5e-15 86.7 253 33.6
Phvul.006G014200 Phaseolus vulgaris HOM05D001843 ORTHO05D003411 2.5e-15 86.7 249 34.9
Gohir.D09G106800 Gossypium hirsutum HOM05D001843 ORTHO05D003411 3.3e-15 86.3 248 33.9
Gorai.006G124400 Gossypium raimondii HOM05D001843 ORTHO05D003411 4.3e-15 85.9 248 33.1
VMungo0540G0682 Vigna mungo HOM05D001843 ORTHO05D003411 4.3e-15 85.9 249 34.5
BcaC03g13674 Brassica carinata HOM05D001843 ORTHO05D003411 5.7e-15 85.5 225 37.3
Lj1C1093G8 Lonicera japonica HOM05D001843 ORTHO05D003411 5.7e-15 85.5 253 33.6
Potri.001G275400 Populus trichocarpa HOM05D001843 ORTHO05D003411 5.7e-15 85.5 167 40.7
Nitab4.5_0001052g0120 Nicotiana tabacum HOM05D001843 ORTHO05D003411 7.4e-15 85.1 254 34.3
Oeu022965.1 Olea europaea HOM05D001843 ORTHO05D003411 7.4e-15 85.1 253 33.6
Ca_01866_v3 Cicer arietinum L. HOM05D001843 ORTHO05D003411 1.3e-14 84.3 250 34.8
Actinidia38162 Actinidia chinensis HOM05D001843 ORTHO05D003411 2.2e-14 83.6 249 31.7
Migut.J01661 Erythranthe guttata HOM05D001843 ORTHO05D003411 2.2e-14 83.6 251 31.5
Medtr5g089510 Medicago truncatula HOM05D001843 ORTHO05D003411 2.8e-14 83.2 250 34.4
Nitab4.5_0005263g0050 Nicotiana tabacum HOM05D001843 ORTHO05D003411 2.8e-14 83.2 251 34.3
TAR369G0365 Trochodendron aralioides HOM05D001843 ORTHO05D003411 2.8e-14 83.2 250 31.6
TAR636G1222 Trochodendron aralioides HOM05D001843 ORTHO05D003411 2.8e-14 83.2 253 32.8
AUR62030323 Chenopodium quinoa HOM05D001843 ORTHO05D003411 4.8e-14 82.4 248 32.7
Manes.01G178600 Manihot esculenta HOM05D001843 ORTHO05D003411 4.8e-14 82.4 255 32.9
Actinidia16384 Actinidia chinensis HOM05D001843 ORTHO05D003411 8.2e-14 81.6 248 33.9
Actinidia24454 Actinidia chinensis HOM05D001843 ORTHO05D003411 8.2e-14 81.6 248 33.9
Rhsim03G0039500 Rhododendron simsii HOM05D001843 ORTHO05D003411 8.2e-14 81.6 166 36.7
Dinv09713 Davidia involucrata HOM05D001843 ORTHO05D003411 1.1e-13 81.3 250 33.2
HanXRQChr04g0096761 Helianthus annuus HOM05D001843 ORTHO05D003411 1.4e-13 80.9 249 30.5
CSS0047730 Camellia sinensis var. sinensis HOM05D001843 ORTHO05D003411 1.8e-13 80.5 166 38.6
MBI15_g24196_MAGBIO Magnolia biondii HOM05D001843 ORTHO05D003411 1.8e-13 80.5 253 33.2
Nn2g14811 Nelumbo nucifera HOM05D001843 ORTHO05D003411 1.8e-13 80.5 248 31.5
Oeu057789.1 Olea europaea HOM05D001843 ORTHO05D003411 1.8e-13 80.5 251 31.5
Oeu057790.3 Olea europaea HOM05D001843 ORTHO05D003411 1.8e-13 80.5 251 31.5
Actinidia06965 Actinidia chinensis HOM05D001843 ORTHO05D003411 2.4e-13 80.1 248 33.9
Gohir.D07G123700 Gossypium hirsutum HOM05D001843 ORTHO05D003411 2.4e-13 80.1 252 32.5
Gorai.001G133700 Gossypium raimondii HOM05D001843 ORTHO05D003411 2.4e-13 80.1 252 32.5
PSO339G4474 Papaver somniferum HOM05D001843 ORTHO05D003411 3.1e-13 79.7 252 33.3
Ca_06209_v3 Cicer arietinum L. HOM05D001843 ORTHO05D003411 4.1e-13 79.3 238 34.5
MSTRG.10791 Avicennia marina HOM05D001843 ORTHO05D003411 5.3e-13 79.0 255 31.0
Lsat_1_v5_gn_2_36520 Lactuca sativa HOM05D001843 ORTHO05D003411 5.3e-13 79.0 251 31.5
EL10Ac3g07233 Beta vulgaris HOM05D001843 ORTHO05D003411 6.9e-13 78.6 167 36.5
PGSC0003DMG400012944 Solanum tuberosum HOM05D001843 ORTHO05D003411 1.2e-12 77.8 253 32.0
Rhsim13G0209300 Rhododendron simsii HOM05D001843 ORTHO05D003411 2.0e-12 77.0 248 31.9
Sc25g0005440 Simmondsia chinensis HOM05D001843 ORTHO05D003411 2.0e-12 77.0 245 33.1
CiPaw.09G047400 Carya illinoinensis HOM05D001843 ORTHO05D003411 2.6e-12 76.6 250 33.2
AUR62018344 Chenopodium quinoa HOM05D001843 ORTHO05D003411 2.6e-12 76.6 247 30.4
SGA_v2.0_scaffold273G46398 Striga asiatica HOM05D001843 ORTHO05D003411 2.6e-12 76.6 251 30.7
Nitab4.5_0001408g0030 Nicotiana tabacum HOM05D001843 ORTHO05D003411 3.4e-12 76.3 253 32.8
TPR.G15877 Trifolium pratense HOM05D001843 ORTHO05D003411 4.5e-12 75.9 238 31.9
Psat0ss3759g0160 Pisum sativum HOM05D001843 ORTHO05D003411 5.9e-12 75.5 246 31.3
GSVIVG01033622001 Vitis vinifera HOM05D001843 ORTHO05D003411 5.9e-12 75.5 249 31.3
MSTRG.26156 Avicennia marina HOM05D001843 ORTHO05D003411 7.7e-12 75.1 253 32.8
CANSAT54G2892 Cannabis sativa HOM05D001843 ORTHO05D003411 7.7e-12 75.1 244 31.1
Cfa009857 Carpinus fangiana HOM05D001843 ORTHO05D003411 7.7e-12 75.1 225 33.8
Zm00001eb097300 Zea mays HOM05D001843 ORTHO05D003411 7.7e-12 75.1 166 36.7
Phvul.008G201200 Phaseolus vulgaris HOM05D001843 ORTHO05D003411 1.0e-11 74.7 249 29.3
Os08g0305300 Oryza sativa ssp. japonica HOM05D001843 ORTHO05D003411 1.3e-11 74.3 254 30.3
Cc06_g19160 Coffea canephora HOM05D001843 ORTHO05D003411 1.7e-11 73.9 251 31.5
Migut.K00132 Erythranthe guttata HOM05D001843 ORTHO05D003411 1.7e-11 73.9 252 29.4
CSS0033106 Camellia sinensis var. sinensis HOM05D001843 ORTHO05D003411 2.2e-11 73.6 248 31.5
Zm00001eb308540 Zea mays HOM05D001843 ORTHO05D003411 2.2e-11 73.6 162 35.8
PGSC0003DMG400023698 Solanum tuberosum HOM05D001843 ORTHO05D003411 2.9e-11 73.2 179 36.3
DCAR_008578 Daucus carota HOM05D001843 ORTHO05D003411 3.8e-11 72.8 175 36.0
Glyma.02G279500 Glycine max HOM05D001843 ORTHO05D003411 3.8e-11 72.8 246 32.1
QL07p010324 Quercus lobata HOM05D001843 ORTHO05D003411 3.8e-11 72.8 251 31.1
CSS0047486 Camellia sinensis var. sinensis HOM05D001843 ORTHO05D003411 5.0e-11 72.4 254 29.1
CAN.G128.68 Capsicum annuum HOM05D001843 ORTHO05D003411 5.0e-11 72.4 251 32.7
Oeu063780.1 Olea europaea HOM05D001843 ORTHO05D003411 5.0e-11 72.4 169 34.9
Sopen10g031280 Solanum pennellii HOM05D001843 ORTHO05D003411 5.0e-11 72.4 164 36.6
SGA_v2.0_scaffold94G28533 Striga asiatica HOM05D001843 ORTHO05D003411 5.0e-11 72.4 247 29.6
TWI74G0484 Tripterygium wilfordii HOM05D001843 ORTHO05D003411 5.0e-11 72.4 251 31.1
Solyc12g019960.2 Solanum lycopersicum HOM05D001843 ORTHO05D003411 6.5e-11 72.0 253 31.2
Actinidia17692 Actinidia chinensis HOM05D001843 ORTHO05D003411 8.5e-11 71.6 166 36.1
SalBow1G3300 Salvia bowleyana HOM05D001843 ORTHO05D003411 8.5e-11 71.6 252 31.0
Solyc10g080740.2 Solanum lycopersicum HOM05D001843 ORTHO05D003411 8.5e-11 71.6 164 36.6
Ah.04g150960 Amaranthus hybridus HOM05D001843 ORTHO05D003411 1.1e-10 71.2 214 30.4
Eucgr.C04150 Eucalyptus grandis HOM05D001843 ORTHO05D003411 1.1e-10 71.2 248 31.9
Hund19098 Selenicereus undatus HOM05D001843 ORTHO05D003411 1.1e-10 71.2 252 29.8
SalBow6G4459 Salvia bowleyana HOM05D001843 ORTHO05D003411 1.4e-10 70.9 257 31.1
PSO384G2306 Papaver somniferum HOM05D001843 ORTHO05D003411 1.9e-10 70.5 168 36.9
Sabra06G0025900 Salix brachista HOM05D001843 ORTHO05D003411 2.5e-10 70.1 169 35.5
Actinidia01818 Actinidia chinensis HOM05D001843 ORTHO05D003411 3.2e-10 69.7 244 29.1
Peaxi162Scf00696g00316 Petunia axillaris HOM05D001843 ORTHO05D003411 4.2e-10 69.3 166 34.9
Sopen12g010470 Solanum pennellii HOM05D001843 ORTHO05D003411 4.2e-10 69.3 251 30.3
VMungo0647G1982 Vigna mungo HOM05D001843 ORTHO05D003411 4.2e-10 69.3 249 30.5
Actinidia09259 Actinidia chinensis HOM05D001843 ORTHO05D003411 5.5e-10 68.9 244 29.1
Peaxi162Scf00076g00523 Petunia axillaris HOM05D001843 ORTHO05D003411 7.2e-10 68.6 174 37.9
Lsat_1_v5_gn_5_157981 Lactuca sativa HOM05D001843 ORTHO05D003411 1.6e-09 67.4 165 37.0
Lj2A818G16 Lonicera japonica HOM05D001843 ORTHO05D003411 1.6e-09 67.4 164 33.5
TWI77G0714 Tripterygium wilfordii HOM05D001843 ORTHO05D003411 2.1e-09 67.0 167 34.7
CDE01G0707 Ceratophyllum demersum HOM05D001843 ORTHO05D003411 2.7e-09 66.6 163 31.3
Potri.006G038500 Populus trichocarpa HOM05D001843 ORTHO05D003411 2.7e-09 66.6 163 35.0
TWI53G1145 Tripterygium wilfordii HOM05D001843 ORTHO05D003411 2.7e-09 66.6 250 29.6
ECA238G4638 Erigeron canadensis HOM05D001843 ORTHO05D003411 1.0e-08 64.7 259 31.7
ATR0800G115 Amborella trichopoda HOM05D001843 ORTHO05D003411 1.4e-08 64.3 164 32.9
ECA248G1036 Erigeron canadensis HOM05D001843 ORTHO05D003411 1.4e-08 64.3 167 32.9
HPP92_002978 Vanilla planifolia HOM05D001843 ORTHO05D003411 2.3e-08 63.5 250 29.6
vmacro07792 Vaccinium macrocarpon HOM05D001843 ORTHO05D003411 3.0e-08 63.2 168 33.9
HPP92_023797 Vanilla planifolia HOM05D001843 ORTHO05D003411 3.0e-08 63.2 163 36.2
HanXRQChr03g0061551 Helianthus annuus HOM05D001843 ORTHO05D003411 3.9e-08 62.8 163 34.4
unitig_748.g7225 Utricularia gibba HOM05D001843 ORTHO05D003411 8.8e-08 61.6 249 28.1
Gohir.A07G119500 Gossypium hirsutum HOM05D001843 ORTHO05D003411 4.4e-07 59.3 59 52.5
Nitab4.5_0002181g0010 Nicotiana tabacum HOM05D001843 ORTHO05D003411 4.4e-07 59.3 85 44.7
Mapoly0008s0008 Marchantia polymorpha HOM05D001843 ORTHO05D003411 2.2e-06 57.0 153 32.7
TWI74G0935 Tripterygium wilfordii HOM05D001843 ORTHO05D003411 2.2e-06 57.0 252 27.8
CAN.G916.8 Capsicum annuum HOM05D001843 ORTHO05D003411 3.7e-06 56.2 93 43.0
AUR62000193 Chenopodium quinoa HOM05D001843 ORTHO05D003411 3.7e-06 56.2 58 50.0
Ah.06g194570 Amaranthus hybridus HOM05D001843 ORTHO05D003411 6.3e-06 55.5 164 29.9
AUR62006543 Chenopodium quinoa HOM05D001843 ORTHO05D003411 6.3e-06 55.5 58 48.3
AagrBONN_evm.TU.Sc2ySwM_344.3750 Anthoceros agrestis HOM05D001843 ORTHO05D003411 8.2e-06 55.1 161 33.5


User provided reference genes

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