Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p66170 Brassica napus HOM05D004619 ORTHO05D005738 2.3e-57 225.3 112 100.0
BolC9t59437H Brassica oleracea HOM05D004619 ORTHO05D005738 1.1e-56 223.0 112 99.1
BolC6t36187H Brassica oleracea HOM05D004619 ORTHO05D005738 3.1e-54 214.9 112 95.5
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 3.8e-28 128.3 109 64.2
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 5.0e-28 127.9 109 64.2
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 5.0e-28 127.9 109 64.2
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 6.5e-28 127.5 109 64.2
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 1.4e-27 126.3 109 63.3
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 1.4e-27 126.3 109 64.2
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 2.5e-27 125.6 108 63.9
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 3.2e-27 125.2 109 63.3
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 9.4e-27 123.6 109 63.3
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 2.7e-26 122.1 109 63.3
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 8.0e-26 120.6 109 62.4
BcaC08g43687 Brassica carinata HOM05D004619 ORTHO05D005738 3.9e-25 118.2 63 95.2
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 1.5e-24 116.3 110 58.2
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 2.8e-23 112.1 109 56.9
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 1.2e-21 106.7 109 52.3
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 4.5e-21 104.8 109 51.4
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 5.9e-21 104.4 109 52.3
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 5.9e-21 104.4 109 51.4
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 1.0e-20 103.6 109 50.5
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 1.7e-20 102.8 109 48.6
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 1.7e-20 102.8 109 48.6
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 3.8e-20 101.7 109 48.6
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 3.8e-20 101.7 109 51.4
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 46.8
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 49.5
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 49.5
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 47.7
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 49.5
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 50.5
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 5.0e-20 101.3 109 48.6
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 6.5e-20 100.9 109 50.5
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 6.5e-20 100.9 109 48.6
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 6.5e-20 100.9 109 48.6
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 6.5e-20 100.9 109 49.5
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 8.5e-20 100.5 109 50.5
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.9e-19 99.4 109 50.5
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 1.9e-19 99.4 112 48.2
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.9e-19 99.4 109 49.5
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 1.9e-19 99.4 109 49.5
A06p44050 Brassica napus HOM05D004619 ORTHO05D005738 2.5e-19 99.0 65 81.5
BraA06t27279Z Brassica rapa HOM05D004619 ORTHO05D005738 2.5e-19 99.0 65 81.5
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 2.5e-19 99.0 109 47.7
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 2.5e-19 99.0 109 47.7
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 2.5e-19 99.0 109 47.7
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 3.2e-19 98.6 109 49.5
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 3.2e-19 98.6 109 48.6
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 3.2e-19 98.6 109 47.7
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 3.2e-19 98.6 109 48.6
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 4.2e-19 98.2 109 48.6
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 4.2e-19 98.2 109 47.7
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 4.2e-19 98.2 109 47.7
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 4.2e-19 98.2 109 47.7
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 4.2e-19 98.2 109 46.8
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 5.5e-19 97.8 109 45.0
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 5.5e-19 97.8 109 45.9
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 7.2e-19 97.4 109 49.5
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 7.2e-19 97.4 109 45.9
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 7.2e-19 97.4 109 48.6
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 7.2e-19 97.4 109 49.5
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 9.4e-19 97.1 109 48.6
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 9.4e-19 97.1 109 46.8
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 9.4e-19 97.1 109 48.6
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 1.2e-18 96.7 109 47.7
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 1.6e-18 96.3 109 47.7
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 1.6e-18 96.3 109 47.7
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 1.6e-18 96.3 109 47.7
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 2.1e-18 95.9 109 46.8
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 2.7e-18 95.5 109 48.6
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 3.6e-18 95.1 110 50.0
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 3.6e-18 95.1 110 50.0
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 3.6e-18 95.1 109 47.7
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 3.6e-18 95.1 109 48.6
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 4.7e-18 94.7 109 47.7
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 4.7e-18 94.7 109 47.7
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 4.7e-18 94.7 111 45.9
VMungo0647G0418 Vigna mungo HOM05D004619 ORTHO05D005738 4.7e-18 94.7 109 45.9
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 6.1e-18 94.4 109 45.0
BcaB03g16865 Brassica carinata HOM05D004619 ORTHO05D005738 8.0e-18 94.0 63 79.4
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 8.0e-18 94.0 109 46.8
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 1.0e-17 93.6 120 46.7
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 1.0e-17 93.6 109 47.7
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 1.0e-17 93.6 109 47.7
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 1.0e-17 93.6 109 47.7
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 1.4e-17 93.2 109 46.8
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 1.8e-17 92.8 109 45.9
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 1.8e-17 92.8 109 44.0
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 3.0e-17 92.0 109 46.8
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 3.0e-17 92.0 109 46.8
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 4.0e-17 91.7 109 45.0
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 5.2e-17 91.3 109 44.0
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 5.2e-17 91.3 109 46.8
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 5.2e-17 91.3 109 48.6
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 8.8e-17 90.5 109 47.7
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 1.5e-16 89.7 109 46.8
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 2.6e-16 89.0 109 45.9
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 2.6e-16 89.0 109 45.0
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 4.4e-16 88.2 120 45.0
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 2.2e-15 85.9 53 84.9
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 3.5e-13 78.6 109 43.1
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 5.0e-12 74.7 109 38.5
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.1e-10 69.3 106 38.7
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 2.3e-09 65.9 116 36.2
SEGI_32974 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 5.2e-09 64.7 89 42.7
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.6e-08 62.4 88 42.0
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 3.4e-08 62.0 93 38.7
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 4.4e-08 61.6 42 76.2
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 7.5e-08 60.8 109 33.0
FvH4_4g13810 Fragaria vesca HOM05D004619 ORTHO05D005738 1.7e-07 59.7 55 56.4
Lj5g0023577 Lotus japonicus HOM05D004619 ORTHO05D005738 5.4e-06 54.7 43 62.8
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 7.0e-06 54.3 109 32.1


User provided reference genes

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