Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p52100 Brassica napus HOM05D034746 ORTHO05D027523 1.2e-21 105.5 52 100.0
C01p28740 Brassica napus HOM05D034746 ORTHO05D027523 3.0e-20 100.9 51 96.1
C02p34790 Brassica napus HOM05D034746 ORTHO05D027523 7.5e-19 96.3 51 92.2
BcaB01g02659 Brassica carinata HOM05D001007 ORTHO05D027523 1.8e-09 65.1 51 64.7
BcaC09g49458 Brassica carinata HOM05D001007 ORTHO05D002932 5.9e-08 60.1 48 64.6
A01p28790 Brassica napus HOM05D001007 ORTHO05D002932 2.2e-07 58.2 48 62.5
BraA01t03025Z Brassica rapa HOM05D001007 ORTHO05D002932 2.2e-07 58.2 48 62.5
A09p17900 Brassica napus HOM05D001007 ORTHO05D002932 3.8e-07 57.4 48 60.4
BraA09t37424Z Brassica rapa HOM05D001007 ORTHO05D002932 3.8e-07 57.4 48 60.4
Sp2g04780 Schrenkiella parvula HOM05D001007 ORTHO05D002932 3.8e-07 57.4 48 60.4
BcaB07g31184 Brassica carinata HOM05D001007 ORTHO05D002932 5.0e-07 57.0 48 60.4
BcaC04g22190 Brassica carinata HOM05D001007 ORTHO05D002932 8.5e-07 56.2 48 60.4
C09p22270 Brassica napus HOM05D001007 ORTHO05D002932 8.5e-07 56.2 48 60.4
BolC9t55142H Brassica oleracea HOM05D001007 ORTHO05D002932 8.5e-07 56.2 48 60.4
THA.LOC104809621 Tarenaya hassleriana HOM05D001007 ORTHO05D002932 1.5e-06 55.5 48 58.3
AL2G17110 Arabidopsis lyrata HOM05D001007 ORTHO05D002932 1.9e-06 55.1 48 58.3
Carub.0002s0560 Capsella rubella HOM05D001007 ORTHO05D002932 1.9e-06 55.1 48 58.3
Thhalv10023236m.g Eutrema salsugineum HOM05D001007 ORTHO05D002932 1.9e-06 55.1 48 58.3
Ciclev10027747m.g Citrus clementina HOM05D001007 ORTHO05D002932 2.5e-06 54.7 48 56.2
Atru.chr10.855 Acer truncatum HOM05D001007 ORTHO05D002932 3.2e-06 54.3 48 54.2
Aa31LG2G10530 Aethionema arabicum HOM05D001007 ORTHO05D002932 3.2e-06 54.3 48 58.3
AT1G59760 Arabidopsis thaliana HOM05D001007 ORTHO05D002932 4.2e-06 53.9 48 56.2
Sc22g0002310 Simmondsia chinensis HOM05D001007 ORTHO05D002932 4.2e-06 53.9 48 56.2
TPR.G647 Trifolium pratense HOM05D001007 ORTHO05D002932 4.2e-06 53.9 48 54.2
EL10Ac6g13999 Beta vulgaris HOM05D001007 ORTHO05D002932 5.5e-06 53.5 48 56.2
Ca_07028_v3 Cicer arietinum L. HOM05D001007 ORTHO05D000001 5.5e-06 53.5 48 54.2
Glyma.08G361900 Glycine max HOM05D001007 ORTHO05D002932 5.5e-06 53.5 48 54.2
Medtr7g080730 Medicago truncatula HOM05D001007 ORTHO05D002932 5.5e-06 53.5 48 54.2
Manes.07G030200 Manihot esculenta HOM05D001007 ORTHO05D002932 7.2e-06 53.1 48 54.2
Aqoxy2G00826 Aquilegia oxysepala HOM05D001007 ORTHO05D002932 9.5e-06 52.8 48 54.2
AUR62032457 Chenopodium quinoa HOM05D001007 ORTHO05D002932 9.5e-06 52.8 48 54.2


User provided reference genes

Program Settings